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Sed0017445 (gene) of Chayote v1 genome

Gene IDSed0017445
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG08:10250375..10251089
RNA-Seq ExpressionSed0017445
SyntenySed0017445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57544.1 hypothetical protein EZV62_015373 [Acer yangbiense]2.8e-0829.13Show/hide
Query:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPY----------------------------EQTGETIGNMLGVYLDVDIDENNRCRGQT
        VEIE+   N+F   F   ED+  I+ GGPW+FD     +  P                             ++ G+ +G+M+GV  DVD+     C G  
Subjt:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPY----------------------------EQTGETIGNMLGVYLDVDIDENNRCRGQT

Query:  LRIKIKIDLSKPLKRGVYVKLESMAED
        LR+++ +D+SKPL+R + V +    E+
Subjt:  LRIKIKIDLSKPLKRGVYVKLESMAED

TXG61253.1 hypothetical protein EZV62_012616 [Acer yangbiense]2.8e-0830.7Show/hide
Query:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ
        D+EIE   RN F  HF+  EDK+ +++GGPWSFD+    +  P                             ++TG+ +G ++G+  ++D  +++ C G+
Subjt:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ

Query:  TLRIKIKIDLSKPL
         LR+K++I+L KPL
Subjt:  TLRIKIKIDLSKPL

TXG61742.1 hypothetical protein EZV62_013105 [Acer yangbiense]1.6e-0832.43Show/hide
Query:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYEQTGETIGNMLGVYLDVDIDENNRCRGQTLRIKIKIDLSKPLKRGVYVKLESMAEDR
        ++IES   N+F  HF +  D   ++ G PWSFDN    + V  +     +G+M+G  LD+D   +  C G+ +R++I++D++KPLKR ++V +     + 
Subjt:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYEQTGETIGNMLGVYLDVDIDENNRCRGQTLRIKIKIDLSKPLKRGVYVKLESMAEDR

Query:  WFSTAYAKLLN
             Y +L N
Subjt:  WFSTAYAKLLN

TXG64170.1 hypothetical protein EZV62_011164 [Acer yangbiense]1.6e-0828.3Show/hide
Query:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYE----------------------------QTGETIGNMLGVYLDVDIDENNRCRGQT
        ++IE  + N+F  +F+N  D+  IM GGPWSFDN    +  P E                            + GE +G ++G  +D+D+     C G+ 
Subjt:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYE----------------------------QTGETIGNMLGVYLDVDIDENNRCRGQT

Query:  LRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKLLNSALDAKESVTEQRSAKKFRK
        +R+K+ ID+SKPL+R  +++LE      W            L A     + +S ++FRK
Subjt:  LRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKLLNSALDAKESVTEQRSAKKFRK

TXG70202.1 hypothetical protein EZV62_005137 [Acer yangbiense]1.2e-0828.99Show/hide
Query:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ
        +++IE  + N+F  +F N +D+L ++ GGPW FDNG   +  P                             ++ G+ +G ++G  +D+D+     C G+
Subjt:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ

Query:  TLRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKL
         +RI++ ID+SKPLKR + ++LE   E+      Y KL
Subjt:  TLRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKL

TrEMBL top hitse value%identityAlignment
A0A5C7HKY9 CCHC-type domain-containing protein1.3e-0829.13Show/hide
Query:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPY----------------------------EQTGETIGNMLGVYLDVDIDENNRCRGQT
        VEIE+   N+F   F   ED+  I+ GGPW+FD     +  P                             ++ G+ +G+M+GV  DVD+     C G  
Subjt:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPY----------------------------EQTGETIGNMLGVYLDVDIDENNRCRGQT

Query:  LRIKIKIDLSKPLKRGVYVKLESMAED
        LR+++ +D+SKPL+R + V +    E+
Subjt:  LRIKIKIDLSKPLKRGVYVKLESMAED

A0A5C7HVV5 DUF4283 domain-containing protein1.3e-0830.7Show/hide
Query:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ
        D+EIE   RN F  HF+  EDK+ +++GGPWSFD+    +  P                             ++TG+ +G ++G+  ++D  +++ C G+
Subjt:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ

Query:  TLRIKIKIDLSKPL
         LR+K++I+L KPL
Subjt:  TLRIKIKIDLSKPL

A0A5C7I045 Uncharacterized protein7.9e-0932.43Show/hide
Query:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYEQTGETIGNMLGVYLDVDIDENNRCRGQTLRIKIKIDLSKPLKRGVYVKLESMAEDR
        ++IES   N+F  HF +  D   ++ G PWSFDN    + V  +     +G+M+G  LD+D   +  C G+ +R++I++D++KPLKR ++V +     + 
Subjt:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYEQTGETIGNMLGVYLDVDIDENNRCRGQTLRIKIKIDLSKPLKRGVYVKLESMAEDR

Query:  WFSTAYAKLLN
             Y +L N
Subjt:  WFSTAYAKLLN

A0A5C7I4J2 DUF4283 domain-containing protein7.9e-0928.3Show/hide
Query:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYE----------------------------QTGETIGNMLGVYLDVDIDENNRCRGQT
        ++IE  + N+F  +F+N  D+  IM GGPWSFDN    +  P E                            + GE +G ++G  +D+D+     C G+ 
Subjt:  VEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYE----------------------------QTGETIGNMLGVYLDVDIDENNRCRGQT

Query:  LRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKLLNSALDAKESVTEQRSAKKFRK
        +R+K+ ID+SKPL+R  +++LE      W            L A     + +S ++FRK
Subjt:  LRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKLLNSALDAKESVTEQRSAKKFRK

A0A5C7IP22 Uncharacterized protein6.0e-0928.99Show/hide
Query:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ
        +++IE  + N+F  +F N +D+L ++ GGPW FDNG   +  P                             ++ G+ +G ++G  +D+D+     C G+
Subjt:  DVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVP----------------------------YEQTGETIGNMLGVYLDVDIDENNRCRGQ

Query:  TLRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKL
         +RI++ ID+SKPLKR + ++LE   E+      Y KL
Subjt:  TLRIKIKIDLSKPLKRGVYVKLESMAEDRWFSTAYAKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTTTGAGAACCAGCTGGGAAGGATGAGAATAACTGAAGATGAAAGAGCTTGTCGTGTTGAAATTGGCGACGACGACGTGGATGTAGAGATAGAGTCTCAGGA
GAGGAATCTCTTTCAATGTCATTTCGCTAATTTAGAGGACAAGTTGAGTATAATGGAAGGAGGTCCTTGGAGCTTTGATAATGGAAAAACTACCATCTTTGTGCCTTACG
AGCAGACGGGCGAAACAATAGGAAATATGTTGGGTGTTTATTTAGACGTGGATATTGACGAGAATAATAGATGTAGGGGGCAAACATTGAGGATTAAGATTAAAATTGAC
CTATCAAAACCTCTAAAGAGAGGGGTCTATGTTAAATTAGAATCCATGGCAGAGGATAGGTGGTTCTCCACGGCTTACGCAAAGTTACTGAATTCTGCTTTGGATGCGAA
AGAATCGGTCACGGAACAAAGGAGTGCAAAGAAGTTTCGGAAAGGGGAGCGCGAGATCTGGTGTCTGGGGGATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTTTGAGAACCAGCTGGGAAGGATGAGAATAACTGAAGATGAAAGAGCTTGTCGTGTTGAAATTGGCGACGACGACGTGGATGTAGAGATAGAGTCTCAGGA
GAGGAATCTCTTTCAATGTCATTTCGCTAATTTAGAGGACAAGTTGAGTATAATGGAAGGAGGTCCTTGGAGCTTTGATAATGGAAAAACTACCATCTTTGTGCCTTACG
AGCAGACGGGCGAAACAATAGGAAATATGTTGGGTGTTTATTTAGACGTGGATATTGACGAGAATAATAGATGTAGGGGGCAAACATTGAGGATTAAGATTAAAATTGAC
CTATCAAAACCTCTAAAGAGAGGGGTCTATGTTAAATTAGAATCCATGGCAGAGGATAGGTGGTTCTCCACGGCTTACGCAAAGTTACTGAATTCTGCTTTGGATGCGAA
AGAATCGGTCACGGAACAAAGGAGTGCAAAGAAGTTTCGGAAAGGGGAGCGCGAGATCTGGTGTCTGGGGGATGGCTGA
Protein sequenceShow/hide protein sequence
MEDFENQLGRMRITEDERACRVEIGDDDVDVEIESQERNLFQCHFANLEDKLSIMEGGPWSFDNGKTTIFVPYEQTGETIGNMLGVYLDVDIDENNRCRGQTLRIKIKID
LSKPLKRGVYVKLESMAEDRWFSTAYAKLLNSALDAKESVTEQRSAKKFRKGEREIWCLGDG