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Sed0017446 (gene) of Chayote v1 genome

Gene IDSed0017446
OrganismSechium edule (Chayote v1)
Descriptionconserved peptide upstream open reading frame 37
Genome locationLG04:1292179..1292461
RNA-Seq ExpressionSed0017446
SyntenySed0017446
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD40989.1 TPA_asm: hypothetical protein HUJ06_015312 [Nelumbo nucifera]3.1e-1994.34Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAASQTRFRALKHE GIAGSATI+VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
KAG2692473.1 hypothetical protein I3760_08G055400 [Carya illinoinensis]5.3e-1992.45Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAASQTRFRA+KHE GIAGSATI+VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
PIM97324.1 hypothetical protein CDL12_30205 [Handroanthus impetiginosus]7.0e-1992.45Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAASQTRFRALKHE GIAG+ATI+VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
PRQ21286.1 hypothetical protein RchiOBHm_Chr7g0237501 [Rosa chinensis]4.1e-1994.34Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MVSQAASQTRFRALKHE GI GSATIV+RVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
RWR92484.1 transcription factor BHLH021 [Cinnamomum micranthum f. kanehirae]2.4e-1994.34Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAASQTRFRALKHE+GIAGSATI+VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
TrEMBL top hitse value%identityAlignment
A0A199UQL5 Uncharacterized protein4.4e-1990.57Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAA+QTRFRALKHE GIAGSATI+VR+IACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
A0A2G9FWQ8 Uncharacterized protein3.4e-1992.45Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAASQTRFRALKHE GIAG+ATI+VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
A0A2P6PH80 Uncharacterized protein2.0e-1994.34Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MVSQAASQTRFRALKHE GI GSATIV+RVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
A0A443PNX4 Transcription factor BHLH0211.2e-1994.34Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAASQTRFRALKHE+GIAGSATI+VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
F6H111 Uncharacterized protein1.5e-1994.34Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV QAASQTRFRALKHE GIAGSATI+VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09461.1 conserved peptide upstream open reading frame 431.7e-1570.37Show/hide
Query:  MVSQAASQTRFRALKHE-TGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MVSQ+A QTRFR  K+E  G +   TIVVRVIACFQP+ +CQAEYFRH+LKPVT
Subjt:  MVSQAASQTRFRALKHE-TGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
AT5G50011.1 conserved peptide upstream open reading frame 371.4e-1781.13Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV Q+A QTRFR LKHE GI G+  IVVRVIACFQPLQDCQAEYFR LLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
AT5G64341.1 conserved peptide upstream open reading frame 405.0e-1567.92Show/hide
Query:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT
        MV Q+  +TRFR LK+ETG A  +TIVVRVI C+QP+ +CQAEYFR LLKPVT
Subjt:  MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGCCAAGCAGCTTCTCAAACAAGATTTCGAGCATTGAAACACGAAACAGGGATTGCTGGTAGTGCCACCATAGTCGTTAGAGTCATAGCATGCTTTCAACCTCT
CCAGGATTGTCAGGCTGAGTACTTCCGTCATTTGCTGAAACCCGTCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGCCAAGCAGCTTCTCAAACAAGATTTCGAGCATTGAAACACGAAACAGGGATTGCTGGTAGTGCCACCATAGTCGTTAGAGTCATAGCATGCTTTCAACCTCT
CCAGGATTGTCAGGCTGAGTACTTCCGTCATTTGCTGAAACCCGTCACGTAG
Protein sequenceShow/hide protein sequence
MVSQAASQTRFRALKHETGIAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT