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Sed0017465 (gene) of Chayote v1 genome

Gene IDSed0017465
OrganismSechium edule (Chayote v1)
DescriptionZinc finger, C3HC4 type family protein
Genome locationLG01:7852030..7853925
RNA-Seq ExpressionSed0017465
SyntenySed0017465
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152895.1 uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]8.8e-3287.06Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALG+VFAGVVVFEQRK LY+SISE   PPA QSPMRKPV AK+YGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_008457526.1 PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo]5.7e-3184.71Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALG+ FAGVVVFEQRK LY+SISE   PPA QSPMRKPV AK+YGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_022156577.1 uncharacterized protein LOC111023455 [Momordica charantia]1.5e-3188.24Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALG+VFAGVVVFEQRK LYRSISE   PPA QSPMRKPV AK+YGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_022964845.1 uncharacterized protein LOC111464826 [Cucurbita moschata]1.3e-3084.71Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALG+VFAGVVVFEQRK +Y SIS+   PP  QSPMRKPV AK+YGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_023519919.1 uncharacterized protein LOC111783242 [Cucurbita pepo subsp. pepo]7.5e-3185.88Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALG+VFAGVVVFEQRK LY SIS+   PP  QSPMRKPV AK+YGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
TrEMBL top hitse value%identityAlignment
A0A0A0LXB2 Uncharacterized protein4.3e-3287.06Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALG+VFAGVVVFEQRK LY+SISE   PPA QSPMRKPV AK+YGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A1S3C5P6 uncharacterized protein LOC103497197 isoform X22.8e-3184.71Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALG+ FAGVVVFEQRK LY+SISE   PPA QSPMRKPV AK+YGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A5D3BR76 Uncharacterized protein2.8e-3184.71Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALG+ FAGVVVFEQRK LY+SISE   PPA QSPMRKPV AK+YGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A6J1DSC3 uncharacterized protein LOC1110234557.3e-3288.24Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALG+VFAGVVVFEQRK LYRSISE   PPA QSPMRKPV AK+YGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A6J1HZ79 uncharacterized protein LOC1114694466.2e-3185.88Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALG+VFAGVVVFEQRK LY SIS+   PP  QSPMRKPV AK+YGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28430.1 unknown protein1.2e-1852.94Show/hide
Query:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLG  LG+   G +VFEQRK ++ S+S+       Q+ +   +F K+Y  EF+ LWN+AVDQTF P I+ LSSR W
Subjt:  MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCATTCTCGCTCAGGAGCGGCTTCTTGGTGCTGCATTAGGCGCCGTATTCGCCGGGGTTGTTGTTTTTGAGCAGCGTAAACGCTTATACAGATCCATTTCTGA
AATCTGTCCTCCGCCAGCCGCCCAATCTCCGATGAGAAAACCTGTATTTGCAAAGGAATATGGCCCAGAGTTTTCGCACCTATGGAATAGAGCTGTAGACCAGACATTTG
GACCTGTGATTCAGGCTCTCAGTTCACGGGGATGGTGA
mRNA sequenceShow/hide mRNA sequence
AATAGATTTGGGTAGACTTTTTTAATTTTCCACTTTTACCCTCGATTTATTCTCAGACCTAATCTCGTCGTTTTCAACCTCTCCGTCAATGGCCGCACCGATCAAATCCC
TCGAGAGAAGACAGCAACCAACTTCTTCCTTTCCAATTCTAACCCATCATTTTCTTCATCGTTCGAAAATCAACTCGGCGAAGCTTCTGCCACTATGATTTCCATTCTCG
CTCAGGAGCGGCTTCTTGGTGCTGCATTAGGCGCCGTATTCGCCGGGGTTGTTGTTTTTGAGCAGCGTAAACGCTTATACAGATCCATTTCTGAAATCTGTCCTCCGCCA
GCCGCCCAATCTCCGATGAGAAAACCTGTATTTGCAAAGGAATATGGCCCAGAGTTTTCGCACCTATGGAATAGAGCTGTAGACCAGACATTTGGACCTGTGATTCAGGC
TCTCAGTTCACGGGGATGGTGATATGTTGAGAATCATTTCTTCATCAATGCTCGTAAACATCAATTCATGAAACATGTAAGGAAGCAGAAATTAAAGTTTGTATTTTTAA
CATTTTGAATTGTCAAACAACTGCTGTTATGACTGTTGAACAAGGCCACGAGTATACAGGCCTTTAAAACAATATATCCCTTTCCCCCCTACAATCTGTGGTTCCTTTTT
TTTAATATATATTTTTTTTCTATATATTAATATTTCTCTGAGAAGCCATGTGTTTAAAATGCAACTGCCAGCTCTGAATCCACCCATTAGTCG
Protein sequenceShow/hide protein sequence
MISILAQERLLGAALGAVFAGVVVFEQRKRLYRSISEICPPPAAQSPMRKPVFAKEYGPEFSHLWNRAVDQTFGPVIQALSSRGW