CuGenDBv2

Gene ID	Sed0017474
Organism	Sechium edule (Chayote v1)
Description	Cellulose synthase
Genome location	LG04:38192788..38195637
RNA-Seq Expression	Sed0017474
Synteny	Sed0017474
Gene Ontology terms	GO:0071554 - cell wall organization or biogenesis (biological process) GO:0071840 - cellular component organization or biogenesis (biological process) GO:0016020 - membrane (cellular component) GO:0016759 - cellulose synthase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606879.1 hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-36

66.43

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        M VAEEPILSRL+RLD M+RRLEEIRGCGKSP+SSCASTPSSGTLTSDY TSSVDLSPK+L+KH RPI+HVVKVTEL+GSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM--------KSFKQLVQQCMTGSSSSDHNS
        GEIER ++M M        KSFKQL+Q C TG     H S
Subjt:  GEIERGRDMTM--------KSFKQLVQQCMTGSSSSDHNS

XP_004151057.1 uncharacterized protein LOC101205386 [Cucumis sativus]

1.0e-38

69.85

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAVAEEPILSRLDRLD M+RRLEEIRGCGKSP+SSCASTPSSGTLTSDYHTSSVDLSPKSL+KH RPI+HVVKV ELKGSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM---------KSFKQLVQQCMTGSSS
        G++ER +DM M         +SFKQLVQ+CMTG  +
Subjt:  GEIERGRDMTM---------KSFKQLVQQCMTGSSS

XP_008461800.1 PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo]

1.3e-38

68.84

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAVAEEPILSRLDRLD M+RRLEEI+GC KSP+SSCASTPSSGTLTSDYHTSSVDLSPKSL+KH RPI+HVV+V ELKGSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM----------KSFKQLVQQCMTGSSSS
        GE+ER +DM M          KSFKQLVQQCMTG  ++
Subjt:  GEIERGRDMTM----------KSFKQLVQQCMTGSSSS

XP_022152667.1 uncharacterized protein LOC111020329 [Momordica charantia]

3.3e-37

66.43

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAVAEEPILSRLDRLD ++RRLEEIRGCGKSP+SSC STPSSGTLTSDYHTSSVDLSPKSL+KH RPIS+V+K+TE+KGSLV+RM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM-----------KSFKQLVQQCMTGSSSSD
        GEIER R+  M           KSFKQLVQ+CMTG    D
Subjt:  GEIERGRDMTM-----------KSFKQLVQQCMTGSSSSD

XP_038905600.1 uncharacterized protein LOC120091575 [Benincasa hispida]

1.0e-38

70.37

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAV EEPILSRLDRLD M+RRLEEIRGCGKSP+SSCASTPSSGTLTSDYHTSSVDLSPK L+KH RPI+HV+KV ELKGSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM--------KSFKQLVQQCMTGSSS
        GEIER R+M +        KSFKQLVQQCMTG  +
Subjt:  GEIERGRDMTM--------KSFKQLVQQCMTGSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCD9 Uncharacterized protein

5.0e-39

69.85

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAVAEEPILSRLDRLD M+RRLEEIRGCGKSP+SSCASTPSSGTLTSDYHTSSVDLSPKSL+KH RPI+HVVKV ELKGSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM---------KSFKQLVQQCMTGSSS
        G++ER +DM M         +SFKQLVQ+CMTG  +
Subjt:  GEIERGRDMTM---------KSFKQLVQQCMTGSSS

A0A1S3CFF4 uncharacterized protein LOC103500315

6.5e-39

68.84

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAVAEEPILSRLDRLD M+RRLEEI+GC KSP+SSCASTPSSGTLTSDYHTSSVDLSPKSL+KH RPI+HVV+V ELKGSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM----------KSFKQLVQQCMTGSSSS
        GE+ER +DM M          KSFKQLVQQCMTG  ++
Subjt:  GEIERGRDMTM----------KSFKQLVQQCMTGSSSS

A0A5A7U299 Uncharacterized protein

6.5e-39

68.84

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAVAEEPILSRLDRLD M+RRLEEI+GC KSP+SSCASTPSSGTLTSDYHTSSVDLSPKSL+KH RPI+HVV+V ELKGSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM----------KSFKQLVQQCMTGSSSS
        GE+ER +DM M          KSFKQLVQQCMTG  ++
Subjt:  GEIERGRDMTM----------KSFKQLVQQCMTGSSSS

A0A6J1DGX0 uncharacterized protein LOC111020329

1.6e-37

66.43

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        MAVAEEPILSRLDRLD ++RRLEEIRGCGKSP+SSC STPSSGTLTSDYHTSSVDLSPKSL+KH RPIS+V+K+TE+KGSLV+RM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM-----------KSFKQLVQQCMTGSSSSD
        GEIER R+  M           KSFKQLVQ+CMTG    D
Subjt:  GEIERGRDMTM-----------KSFKQLVQQCMTGSSSSD

A0A6J1KAC7 uncharacterized protein LOC111493115

1.4e-36

66.43

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------
        M VA+EPILSRL+RLD M+RRLEEIRGCGKSP+SSCASTPSSGTLTSDY TSSVDLSPK+L+KH RPI+HVVKVTEL+GSLVERM               
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERM---------------

Query:  GEIERGRDMTM--------KSFKQLVQQCMTGSSSSDHNS
        GEIE+ ++M M        KSFKQLVQ CMTG     H S
Subjt:  GEIERGRDMTM--------KSFKQLVQQCMTGSSSSDHNS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G07985.1 Expressed protein

4.9e-15

49.53

Show/hide

Query:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDL-SPKSLDK-HRRPISHVVKVTELKGSLVERMGEIERGRDMTMKS
        MAV EEPILSRLDR+D MVR+LEE++  G SP SS  STPSSGT       SS+DL SP+S+ K H R +  V + TE KG+L+ER+  +E         
Subjt:  MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDL-SPKSLDK-HRRPISHVVKVTELKGSLVERMGEIERGRDMTMKS

Query:  FKQLVQQ
        F++ V++
Subjt:  FKQLVQQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGTTGCTGAAGAACCGATTCTGTCGCGGTTGGACCGGCTTGATAAAATGGTGAGGCGGTTAGAGGAAATTAGAGGGTGTGGGAAGTCTCCAGAGAGCTCATGTGC
ATCCACTCCGTCAAGTGGGACCCTCACCAGCGATTATCACACCTCGTCCGTTGATCTCTCGCCAAAAAGTCTGGACAAGCACCGCCGTCCGATCAGCCACGTGGTTAAAG
TTACCGAGCTCAAAGGAAGTCTCGTTGAGAGAATGGGAGAGATAGAAAGGGGGAGAGATATGACAATGAAGAGCTTTAAACAACTTGTTCAACAATGCATGACAGGATCG
TCTTCATCGGATCATAACTCATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAVAEEPILSRLDRLDKMVRRLEEIRGCGKSPESSCASTPSSGTLTSDYHTSSVDLSPKSLDKHRRPISHVVKVTELKGSLVERMGEIERGRDMTMKSFKQLVQQCMTGS
SSSDHNS

Sed0017474 (gene) of Chayote v1 genome