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Sed0017490 (gene) of Chayote v1 genome

Gene IDSed0017490
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain protein
Genome locationLG05:7184033..7184452
RNA-Seq ExpressionSed0017490
SyntenySed0017490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570883.1 hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1344.23Show/hide
Query:  MGN-CLRSNKVTAY---------SPAEQAKKVERIVPATGSAIG-----------------------EKREASGSDGGAG-IGRVVRIKVVMSWKELERI
        MGN C +SNKV A          SP  +AKKVE   P  GSA+                        E+ E SG  GG G    V+RIKVVMS +EL++I
Subjt:  MGN-CLRSNKVTAY---------SPAEQAKKVERIVPATGSAIG-----------------------EKREASGSDGGAG-IGRVVRIKVVMSWKELERI

Query:  LKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPEHIN
        LK+ EN   S E+LI E  VKGRT   VSDA + + VEDENG   PALE IPE ++
Subjt:  LKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPEHIN

KGN63254.1 hypothetical protein Csa_022493 [Cucumis sativus]4.4e-0850.59Show/hide
Query:  EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE
        EK E   + G +G G V+RIKVV+S KEL++ILK  EN+  S E+LI EL VKGR   V +         DE G W PALE IPE
Subjt:  EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE

TYK24218.1 hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]5.2e-0939.61Show/hide
Query:  MGN-CLRSNKVTAYS------PAEQ---AKKVERIVPATGSAIGEKREA-------------------------SGSDGGAGIGRVVRIKVVMSWKELER
        MGN C R+NKV A        P +Q   A+KVE      GSA+ + +                           SG D GAG   V+RIKVV+S KEL+ 
Subjt:  MGN-CLRSNKVTAYS------PAEQ---AKKVERIVPATGSAIGEKREA-------------------------SGSDGGAGIGRVVRIKVVMSWKELER

Query:  ILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE
        ILK+ EN+  S E+LI EL VKGR             V DE G W PALE IPE
Subjt:  ILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE

XP_022140639.1 uncharacterized protein LOC111011249 [Momordica charantia]3.1e-1443.05Show/hide
Query:  MGNCLRSNKVTAYSPA----------EQAKKVERIVPATGSAIG-------------------EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGE
        MGNCLR+N+V A   A          E   KVE   PA GSA+                    ++RE   S GG G   V+RIKVV+S KEL++ILKD E
Subjt:  MGNCLRSNKVTAYSPA----------EQAKKVERIVPATGSAIG-------------------EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGE

Query:  NDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPEHIN
        ++  + E+L+ EL +KGRT   +SDA  +   EDENG W PALESIPE ++
Subjt:  NDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPEHIN

XP_038902397.1 uncharacterized protein LOC120089037 [Benincasa hispida]1.2e-1647.14Show/hide
Query:  NCLRSNKVTAYS------PAEQAKKVERIVPATGSAIGEKREASGSDGGA-----------------GIGRVVRIKVVMSWKELERILKDGENDCGSFEK
        NC +SNKV A        P  +AKKVE   P  GSA+ + + A    GGA                 G G V+RIKVVMS KEL+++LKD EN+  + E+
Subjt:  NCLRSNKVTAYS------PAEQAKKVERIVPATGSAIGEKREASGSDGGA-----------------GIGRVVRIKVVMSWKELERILKDGENDCGSFEK

Query:  LIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE
        LI EL VKGRT   +SD  + +AVEDENGRW P LE IPE
Subjt:  LIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE

TrEMBL top hitse value%identityAlignment
A0A0A0LQE9 Uncharacterized protein2.1e-0850.59Show/hide
Query:  EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE
        EK E   + G +G G V+RIKVV+S KEL++ILK  EN+  S E+LI EL VKGR   V +         DE G W PALE IPE
Subjt:  EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE

A0A4V3WQ11 Uncharacterized protein2.9e-0530.94Show/hide
Query:  MGNCLRSNKVTAYSPAEQAKKVERIVPATGSAIG--------------EKREASGSDG------GAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKL
        MGNC+ SNK+      ++  + ER +  +   +               E+ E    DG      G   G  VRI+VV++ +EL RIL + ++   S E++
Subjt:  MGNCLRSNKVTAYSPAEQAKKVERIVPATGSAIG--------------EKREASGSDG------GAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKL

Query:  IGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE
        +GE+ +K R    +  +      E  NG W PALESIPE
Subjt:  IGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE

A0A5B7A6T3 Uncharacterized protein9.9e-0630.77Show/hide
Query:  MGNCLRSNKVTAYS----PAEQAKKVERIVPATGSAIGEKREASGSDGGA---------GIGR---------VVRIKVVMSWKELERILKDGENDCGSFE
        MGNC+ +N +   +    P  +A+ ++     T S +G  R A+G              G+GR         VVRI+VV++ +EL +IL + E++  S E
Subjt:  MGNCLRSNKVTAYS----PAEQAKKVERIVPATGSAIGEKREASGSDGGA---------GIGR---------VVRIKVVMSWKELERILKDGENDCGSFE

Query:  KLIGELMVKGR--TRMVVSDAGVEEAVEDENGRWSPALESIPE
        +L+  + ++ R  +++ ++D G+       NG W PALESIPE
Subjt:  KLIGELMVKGR--TRMVVSDAGVEEAVEDENGRWSPALESIPE

A0A5D3DKZ8 Uncharacterized protein2.5e-0939.61Show/hide
Query:  MGN-CLRSNKVTAYS------PAEQ---AKKVERIVPATGSAIGEKREA-------------------------SGSDGGAGIGRVVRIKVVMSWKELER
        MGN C R+NKV A        P +Q   A+KVE      GSA+ + +                           SG D GAG   V+RIKVV+S KEL+ 
Subjt:  MGN-CLRSNKVTAYS------PAEQ---AKKVERIVPATGSAIGEKREA-------------------------SGSDGGAGIGRVVRIKVVMSWKELER

Query:  ILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE
        ILK+ EN+  S E+LI EL VKGR             V DE G W PALE IPE
Subjt:  ILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPE

A0A6J1CG85 uncharacterized protein LOC1110112491.5e-1443.05Show/hide
Query:  MGNCLRSNKVTAYSPA----------EQAKKVERIVPATGSAIG-------------------EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGE
        MGNCLR+N+V A   A          E   KVE   PA GSA+                    ++RE   S GG G   V+RIKVV+S KEL++ILKD E
Subjt:  MGNCLRSNKVTAYSPA----------EQAKKVERIVPATGSAIG-------------------EKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGE

Query:  NDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPEHIN
        ++  + E+L+ EL +KGRT   +SDA  +   EDENG W PALESIPE ++
Subjt:  NDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPEHIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21680.1 unknown protein2.0e-0634.43Show/hide
Query:  MGNCLRSNKVTAYSPAEQAKK---VERIVPATGSAIGEKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDA
        MGNCLR +   A    +       V+ +     S  GE+     ++  +   +VVRIKVV++ KEL +IL   +N   S ++L+  L   GR   + S  
Subjt:  MGNCLRSNKVTAYSPAEQAKK---VERIVPATGSAIGEKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDA

Query:  GVEEAVEDENGRWSPALESIPE
          E+   DEN  W P LESIPE
Subjt:  GVEEAVEDENGRWSPALESIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTGTTTGAGGAGCAACAAAGTTACGGCGTATTCGCCCGCCGAGCAAGCGAAGAAGGTAGAGCGCATCGTCCCGGCTACTGGATCGGCGATCGGCGAGAAGCG
AGAAGCGAGTGGCAGCGACGGCGGTGCCGGGATTGGTAGAGTGGTGAGGATTAAAGTGGTGATGTCTTGGAAAGAGTTGGAGCGGATTTTGAAGGATGGAGAGAATGATT
GTGGTAGTTTTGAGAAATTGATTGGTGAATTGATGGTTAAAGGCAGGACGAGGATGGTTGTTTCAGATGCTGGAGTTGAAGAAGCTGTTGAGGATGAAAATGGAAGATGG
AGTCCGGCTTTGGAAAGTATTCCCGAACATATAAATTAA
mRNA sequenceShow/hide mRNA sequence
CATTTCTTGAAAACCAAGAAACACAAACTCAGTGAATTCTTTGCTTTCCCCATGGGAAACTGTTTGAGGAGCAACAAAGTTACGGCGTATTCGCCCGCCGAGCAAGCGAA
GAAGGTAGAGCGCATCGTCCCGGCTACTGGATCGGCGATCGGCGAGAAGCGAGAAGCGAGTGGCAGCGACGGCGGTGCCGGGATTGGTAGAGTGGTGAGGATTAAAGTGG
TGATGTCTTGGAAAGAGTTGGAGCGGATTTTGAAGGATGGAGAGAATGATTGTGGTAGTTTTGAGAAATTGATTGGTGAATTGATGGTTAAAGGCAGGACGAGGATGGTT
GTTTCAGATGCTGGAGTTGAAGAAGCTGTTGAGGATGAAAATGGAAGATGGAGTCCGGCTTTGGAAAGTATTCCCGAACATATAAATTAA
Protein sequenceShow/hide protein sequence
MGNCLRSNKVTAYSPAEQAKKVERIVPATGSAIGEKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRW
SPALESIPEHIN