; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017502 (gene) of Chayote v1 genome

Gene IDSed0017502
OrganismSechium edule (Chayote v1)
Descriptionserine/arginine-rich splicing factor RS31-like
Genome locationLG12:450924..453587
RNA-Seq ExpressionSed0017502
SyntenySed0017502
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR029537 - Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019084.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-11987.35Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFE+ERDAED+IR+LDN PFGYDRRRLSVEWARGERGR RDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDD ERG  YD SPRR AYGR GDSP+RRSPSP   R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR
        RPSPDYGRARSPAYDRY  PYERRRSPDYGRNRS    PDYGRNRSPE GR R
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR

XP_022924566.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita moschata]3.5e-11987.35Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFE+ERDAED+IR+LDN PFGYDRRRLSVEWARGERGR RDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDD ERG  YD SPRR AYGR GDSP+RRSPSP   R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR
        RPSPDYGRARSPAYDRY  PYERRRSPDYGRNRS    PDYGRNRSPE GR R
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR

XP_022979301.1 serine/arginine-rich splicing factor RS31A-like isoform X1 [Cucurbita maxima]2.6e-11985.99Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFE+ERDAED+IR+LDN PFGYDRRRLSVEWARGERGR RDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDD ERG  YD SPRR AYGR GDSP+RRSPSP   R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEV----RPDYGRNRSPEYGRVR
        RPSPDYGRARSPAYDRY  PYERRRSPDYGRNRSPE      P+ GRNRSPE+GR R
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEV----RPDYGRNRSPEYGRVR

XP_023527368.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp. pepo]7.0e-12085.99Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFE+ERDAED+IR+LDN PFGYDRRRLSVEWARGERGR RDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR  DIE HFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDD ERG  YD SPRR AYGR GDSP+RRSPSP   R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEV----RPDYGRNRSPEYGRVR
        RPSPDYGRARSPAYDRY  PYERRRSPDYGRNRSP+      PDYGRNRSP+YGR R
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEV----RPDYGRNRSPEYGRVR

XP_038893478.1 serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida]1.0e-11887.85Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFEDERDAEDAIR LDN PFGYDRRRLSVEWARGERGRHRDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDD ERG P+D SPRR  YGRPGDSP+RRSPSP  RR
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSP
        RPSPDYGRARSPAYDRY  PYERRRSPDYGRNRSPE      R+RSP
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSP

TrEMBL top hitse value%identityAlignment
A0A5D3DBI0 Serine/arginine-rich splicing factor RS31 isoform X23.9e-11686.69Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLF+KYGRV+RIDMKSGFAFVYFEDERDAEDAIR LDN PFGYDRRRLSVEWARGERGRHRDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRT-AYGRPGDSPHRRSPSPALR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDD ERG P+D SPRR   YGRPGDSP+RRSPSP  R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRT-AYGRPGDSPHRRSPSPALR

Query:  RRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSP
        RRPSPDYGRA SPAYDRY  PYERRRSPDYGRNRSPE    + R+RSP
Subjt:  RRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSP

A0A6J1D279 serine/arginine-rich splicing factor RS31-like isoform X14.6e-11788.26Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFEDERDAEDAIR LDN  FGYDRRRLSVEWARGERGRHRDGSKS+AN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGD-SPHRRSPSPALR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDD ERG P+D SPRR AYGRPGD SP+RRSPSPA R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGD-SPHRRSPSPALR

Query:  RRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRS
        RRPSPDYGRARSPAYDRY  PYERRRSPDYGRNRSPE    YGR RS
Subjt:  RRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRS

A0A6J1ECU9 serine/arginine-rich splicing factor RS31-like isoform X11.7e-11987.35Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFE+ERDAED+IR+LDN PFGYDRRRLSVEWARGERGR RDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDD ERG  YD SPRR AYGR GDSP+RRSPSP   R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR
        RPSPDYGRARSPAYDRY  PYERRRSPDYGRNRS    PDYGRNRSPE GR R
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR

A0A6J1FYP8 serine/arginine-rich splicing factor RS31-like isoform X12.3e-11686.56Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        MKP+FVGNFG+DTRQSELER FAKYGRVDRIDMKSGFAFVYFEDERDA+DAIR LDN PFG+DRRRLSVEWARGERGRHRDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR RDIE HFEPYGKVLNVRIRRNF+FVQFETQEEATKALECTHMSKILDRVVSVEYALRDD ERG PYD SPRRTAYGRPGDSP+RRSPSP LRR
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR
        RPSPDYG  RSPAYDRY  P ERR+SPD  R +S    PDY RNRSPEYGR R
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR

A0A6J1IQE3 serine/arginine-rich splicing factor RS31A-like isoform X11.3e-11985.99Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNFG+DTRQSELERLFAKYGRV+RIDMKSGFAFVYFE+ERDAED+IR+LDN PFGYDRRRLSVEWARGERGR RDGSKSMAN+RPTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR
        DP  TR RDIE HFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDD ERG  YD SPRR AYGR GDSP+RRSPSP   R
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRR

Query:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEV----RPDYGRNRSPEYGRVR
        RPSPDYGRARSPAYDRY  PYERRRSPDYGRNRSPE      P+ GRNRSPE+GR R
Subjt:  RPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEV----RPDYGRNRSPEYGRVR

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS312.3e-9471.04Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNF ++TRQS+LERLF KYGRVDR+DMKSG+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDG-SPRRT---AYGRPGDSPHRRSPSP
        DP  T++ DIE HFEPYGKV NVRIRRNF+FVQFETQE+ATKALE T  SKILDRVVSVEYAL+DDDER     G SPRR+    Y R     + R PSP
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDG-SPRRT---AYGRPGDSPHRRSPSP

Query:  ALRRRPSPDYGRARSPAYDRYTAP--YERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR
           RRPSPDYGRARSP YDRY  P  YERRRSPDYGR  S     DYGR RSP Y R R
Subjt:  ALRRRPSPDYGRARSPAYDRYTAP--YERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR

P92965 Serine/arginine-rich splicing factor RS407.3e-7258.53Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERG---RHRDGS-KSMANRRPTKTLF
        MKP+F GNF +D R+ +LERLF KYG+V+R+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERG---RHRDGS-KSMANRRPTKTLF

Query:  VINFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSP
        VINFD + TR RD+E HFEPYGK++NVRIRRNFAF+Q+E QE+AT+AL+ ++ SK++D+V+SVEYA++DDD RG  +  SP R     P     RRSPSP
Subjt:  VINFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSP

Query:  ALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVRR
          R R SPDYGR  SP      A  + R SPDYGR RSP       R  SPEYGR RR
Subjt:  ALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVRR

P92966 Serine/arginine-rich splicing factor RS414.0e-7056.3Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGER---GRHRDGSKSMANRRPTKTLFV
        MKP+F GNF +D R+S+LERLF KYG+V+R+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGER---GRHRDGSKSMANRRPTKTLFV

Query:  INFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPA
        INFD   TR RD+E HFEPYGK++NVRIRRNFAF+Q+E QE+AT+AL+ T+ SK++D+V+SVEYA++DDD RG  Y  SP R     P     RRSPSP 
Subjt:  INFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPA

Query:  LRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNR---SPEVR----PDYGRN-------RSPEYGRVR
         R R SPDYGR  SP      A    R SPDYGR R   SP  R    PDY R+        SPE G VR
Subjt:  LRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNR---SPEVR----PDYGRN-------RSPEYGRVR

Q9NEW6 Probable splicing factor, arginine/serine-rich 34.4e-1630.92Show/hide
Query:  MFVGNFGFDTRQSELERLFAKYGRVDRIDMKSG----FAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARG------------ERGRH--------
        ++VGN   D R+ E+E +F KYGR+  +D+KSG    FAFV FED RDAEDA+R  D   + +D RR+ VE+ RG            + G H        
Subjt:  MFVGNFGFDTRQSELERLFAKYGRVDRIDMKSG----FAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARG------------ERGRH--------

Query:  RDGSKSMANRRPTKTLFVINFDPNCTRDRDIEGHFEPYGKVLNVRIRRN-FAFVQFETQEEATKALECTHMSKILDRVVSVEY-ALRDDDERGGPYDGSP
        R G +    +R T    ++   P     +D++ H    G V    + R+    V+F   E+   A+     +K         Y  +R+D+  GG   G  
Subjt:  RDGSKSMANRRPTKTLFVINFDPNCTRDRDIEGHFEPYGKVLNVRIRRN-FAFVQFETQEEATKALECTHMSKILDRVVSVEY-ALRDDDERGGPYDGSP

Query:  RRTAYGRPGDSPHRRSPSPALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRP
                G     RS SP   RR SP Y   RS +  R      R RS     +RSP   P
Subjt:  RRTAYGRPGDSPHRRSPSPALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRP

Q9ZPX8 Serine/arginine-rich splicing factor RS31A3.1e-8667.31Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWAR---GERGRHRDGSKSMANRRPTKTLFV
        M+ ++VGNF +DTR S+LERLF+K+GRV R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++N+RPTKTLFV
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWAR---GERGRHRDGSKSMANRRPTKTLFV

Query:  INFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPA
        INFDP  TR+RD+E HFEPYGKVLNVR+RRNFAFVQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+  ER   Y GS R            RRSPSP 
Subjt:  INFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPA

Query:  LRRRPSPDYGRARSPAYDRY--TAPYERRRSPDYGRNRSPEVRPDYG--RNRSPEYGRVR
         RRRPSPDY R RSP YDRY   APYERR+SPDYGR  S     DYG  R RSP Y R R
Subjt:  LRRRPSPDYGRARSPAYDRY--TAPYERRRSPDYGRNRSPEVRPDYG--RNRSPEYGRVR

Arabidopsis top hitse value%identityAlignment
AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-8767.31Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWAR---GERGRHRDGSKSMANRRPTKTLFV
        M+ ++VGNF +DTR S+LERLF+K+GRV R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++N+RPTKTLFV
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWAR---GERGRHRDGSKSMANRRPTKTLFV

Query:  INFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPA
        INFDP  TR+RD+E HFEPYGKVLNVR+RRNFAFVQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+  ER   Y GS R            RRSPSP 
Subjt:  INFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPA

Query:  LRRRPSPDYGRARSPAYDRY--TAPYERRRSPDYGRNRSPEVRPDYG--RNRSPEYGRVR
         RRRPSPDY R RSP YDRY   APYERR+SPDYGR  S     DYG  R RSP Y R R
Subjt:  LRRRPSPDYGRARSPAYDRY--TAPYERRRSPDYGRNRSPEVRPDYG--RNRSPEYGRVR

AT2G46610.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-7266.09Show/hide
Query:  IDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWAR---GERGRHRDGSKSMANRRPTKTLFVINFDPNCTRDRDIEGHFEPYGKVLNVRIRR
        + + +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++N+RPTKTLFVINFDP  TR+RD+E HFEPYGKVLNVR+RR
Subjt:  IDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWAR---GERGRHRDGSKSMANRRPTKTLFVINFDPNCTRDRDIEGHFEPYGKVLNVRIRR

Query:  NFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRRRPSPDYGRARSPAYDRY--TAPYERRR
        NFAFVQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+  ER   Y GS R            RRSPSP  RRRPSPDY R RSP YDRY   APYERR+
Subjt:  NFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRRRPSPDYGRARSPAYDRY--TAPYERRR

Query:  SPDYGRNRSPEVRPDYG--RNRSPEYGRVR
        SPDYGR  S     DYG  R RSP Y R R
Subjt:  SPDYGRNRSPEVRPDYG--RNRSPEYGRVR

AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-9571.04Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF
        M+P+FVGNF ++TRQS+LERLF KYGRVDR+DMKSG+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINF

Query:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDG-SPRRT---AYGRPGDSPHRRSPSP
        DP  T++ DIE HFEPYGKV NVRIRRNF+FVQFETQE+ATKALE T  SKILDRVVSVEYAL+DDDER     G SPRR+    Y R     + R PSP
Subjt:  DPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDG-SPRRT---AYGRPGDSPHRRSPSP

Query:  ALRRRPSPDYGRARSPAYDRYTAP--YERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR
           RRPSPDYGRARSP YDRY  P  YERRRSPDYGR  S     DYGR RSP Y R R
Subjt:  ALRRRPSPDYGRARSPAYDRYTAP--YERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVR

AT4G25500.1 arginine/serine-rich splicing factor 355.2e-7358.53Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERG---RHRDGS-KSMANRRPTKTLF
        MKP+F GNF +D R+ +LERLF KYG+V+R+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERG---RHRDGS-KSMANRRPTKTLF

Query:  VINFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSP
        VINFD + TR RD+E HFEPYGK++NVRIRRNFAF+Q+E QE+AT+AL+ ++ SK++D+V+SVEYA++DDD RG  +  SP R     P     RRSPSP
Subjt:  VINFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSP

Query:  ALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVRR
          R R SPDYGR  SP      A  + R SPDYGR RSP       R  SPEYGR RR
Subjt:  ALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVRR

AT4G25500.4 arginine/serine-rich splicing factor 355.2e-7358.53Show/hide
Query:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERG---RHRDGS-KSMANRRPTKTLF
        MKP+F GNF +D R+ +LERLF KYG+V+R+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERG---RHRDGS-KSMANRRPTKTLF

Query:  VINFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSP
        VINFD + TR RD+E HFEPYGK++NVRIRRNFAF+Q+E QE+AT+AL+ ++ SK++D+V+SVEYA++DDD RG  +  SP R     P     RRSPSP
Subjt:  VINFDPNCTRDRDIEGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSP

Query:  ALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVRR
          R R SPDYGR  SP      A  + R SPDYGR RSP       R  SPEYGR RR
Subjt:  ALRRRPSPDYGRARSPAYDRYTAPYERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCGATGTTTGTTGGGAACTTTGGATTTGACACCCGGCAATCTGAGTTGGAGCGGTTGTTCGCCAAATATGGGAGAGTCGATAGAATCGACATGAAATCTGGTTT
TGCTTTTGTTTACTTTGAAGATGAGAGAGATGCTGAAGATGCCATTCGTAACCTTGATAACGCACCGTTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGG
GTGAGCGAGGTCGTCATCGTGATGGATCCAAGTCGATGGCGAATCGAAGGCCAACCAAAACCTTGTTTGTGATCAATTTTGACCCTAATTGTACTAGAGATCGTGACATT
GAAGGACACTTTGAACCTTATGGAAAGGTCCTCAACGTTCGCATAAGAAGGAACTTTGCATTTGTACAATTTGAGACACAAGAGGAAGCAACCAAAGCCCTTGAGTGTAC
CCACATGAGCAAAATATTAGACAGGGTCGTGTCAGTTGAATATGCTTTGAGGGACGATGATGAGAGGGGTGGCCCTTATGATGGTAGCCCTCGAAGAACAGCATATGGGC
GGCCTGGGGATAGTCCTCACCGGAGGTCACCTAGTCCTGCATTGCGACGTCGACCAAGTCCTGACTATGGACGAGCTCGCAGTCCTGCTTATGATAGGTACACTGCGCCT
TACGAACGACGCCGAAGTCCTGATTATGGGAGGAATCGAAGCCCTGAAGTGCGTCCTGATTATGGTAGGAATCGAAGCCCTGAATATGGTAGAGTTCGCAGGTATGTTTT
GTTCCTTGATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCGATGTTTGTTGGGAACTTTGGATTTGACACCCGGCAATCTGAGTTGGAGCGGTTGTTCGCCAAATATGGGAGAGTCGATAGAATCGACATGAAATCTGGTTT
TGCTTTTGTTTACTTTGAAGATGAGAGAGATGCTGAAGATGCCATTCGTAACCTTGATAACGCACCGTTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGG
GTGAGCGAGGTCGTCATCGTGATGGATCCAAGTCGATGGCGAATCGAAGGCCAACCAAAACCTTGTTTGTGATCAATTTTGACCCTAATTGTACTAGAGATCGTGACATT
GAAGGACACTTTGAACCTTATGGAAAGGTCCTCAACGTTCGCATAAGAAGGAACTTTGCATTTGTACAATTTGAGACACAAGAGGAAGCAACCAAAGCCCTTGAGTGTAC
CCACATGAGCAAAATATTAGACAGGGTCGTGTCAGTTGAATATGCTTTGAGGGACGATGATGAGAGGGGTGGCCCTTATGATGGTAGCCCTCGAAGAACAGCATATGGGC
GGCCTGGGGATAGTCCTCACCGGAGGTCACCTAGTCCTGCATTGCGACGTCGACCAAGTCCTGACTATGGACGAGCTCGCAGTCCTGCTTATGATAGGTACACTGCGCCT
TACGAACGACGCCGAAGTCCTGATTATGGGAGGAATCGAAGCCCTGAAGTGCGTCCTGATTATGGTAGGAATCGAAGCCCTGAATATGGTAGAGTTCGCAGGTATGTTTT
GTTCCTTGATAGTTGA
Protein sequenceShow/hide protein sequence
MKPMFVGNFGFDTRQSELERLFAKYGRVDRIDMKSGFAFVYFEDERDAEDAIRNLDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANRRPTKTLFVINFDPNCTRDRDI
EGHFEPYGKVLNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDDERGGPYDGSPRRTAYGRPGDSPHRRSPSPALRRRPSPDYGRARSPAYDRYTAP
YERRRSPDYGRNRSPEVRPDYGRNRSPEYGRVRRYVLFLDS