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Sed0017508 (gene) of Chayote v1 genome

Gene IDSed0017508
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Genome locationLG03:7941223..7945607
RNA-Seq ExpressionSed0017508
SyntenySed0017508
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038863 - Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147198.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus]5.9e-6493.7Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAGKL NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EALAWLCGGL FFASLGFLAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KASKIPFAPKVYPYDNLRVELGG+PE+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
XP_022950674.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata]9.4e-6291.34Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L NLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EAL WLCGGL FFASLG LAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KAS+IPFAPKVYPYDNLRVELGGE E+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
XP_022965223.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]9.4e-6290.55Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L NLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EALAWLCGGL FFASLGFLAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KASKIPFAPKVYPYDNLRVELGGEPE+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
XP_023005602.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita maxima]9.4e-6291.34Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L NLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EAL WLCGGL FFASLG LAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KAS+IPFAPKVYPYDNLRVELGGE E+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
XP_038903151.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]5.0e-6392.13Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L NL S++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EALAWLCGGL FFASLGFLAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KASKIPFAPKVYPYDNLRVELGGEPE+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
TrEMBL top hitse value%identityAlignment
A0A0A0L5J8 Uncharacterized protein2.8e-6493.7Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAGKL NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EALAWLCGGL FFASLGFLAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KASKIPFAPKVYPYDNLRVELGG+PE+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
A0A1S3BK37 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial2.8e-6493.7Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAGKL NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EALAWLCGGL FFASLGFLAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KASKIPFAPKVYPYDNLRVELGG+PE+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
A0A6J1GGJ2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like4.5e-6291.34Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L NLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EAL WLCGGL FFASLG LAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KAS+IPFAPKVYPYDNLRVELGGE E+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
A0A6J1HN93 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial4.5e-6290.55Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L NLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EALAWLCGGL FFASLGFLAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KASKIPFAPKVYPYDNLRVELGGEPE+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
A0A6J1KTK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like4.5e-6291.34Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L NLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP +DELVWDNGTPFPEPCIDRIADTVGK+EAL WLCGGL FFASLG LAVWND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPES
        KAS+IPFAPKVYPYDNLRVELGGE E+
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPES
SwissProt top hitse value%identityAlignment
Q9FGK0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial3.4e-5477.6Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L  + S+++GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL  +DEL+WDNGT FPEPCIDRIADTVGK+EALAWL GGL FF  LG LAV ND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP
Arabidopsis top hitse value%identityAlignment
AT5G47570.1 unknown protein2.4e-5577.6Show/hide
Query:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND
        MAG+L  + S+++GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL  +DEL+WDNGT FPEPCIDRIADTVGK+EALAWL GGL FF  LG LAV ND
Subjt:  MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCAAGCTCTGCAACTTGGGATCAAAGGTTCTTGGCGGAAATGGCGTCGTTGGCCGCTCCATCGCCTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGT
CGGCAAACACATCGTCCCCGATAAACCACTTCCGGCGGACGACGAACTGGTTTGGGATAATGGAACCCCTTTTCCCGAGCCCTGTATTGATCGCATCGCAGATACGGTTG
GGAAGTTCGAAGCCTTGGCGTGGTTGTGTGGGGGACTGAGTTTTTTCGCATCTCTAGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATTCCATTTGCGCCAAAA
GTGTATCCGTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCCGAATCATAA
mRNA sequenceShow/hide mRNA sequence
ATTTAATTTAACTGACTCCGATTGACCTTATCAAAAAACCGACCGACCGACCTTGATTCGGTCGGTTTTGGTCGGTCGGTTCGATTTTCGGATAAAATGTGAACACCCCT
AATTGTTCCAAAGAACAAAAACTCAAAAACAAGAATTTGGGAATTTCGAAGAGGGAAAATCACCGAAAATGGCAGGCAAGCTCTGCAACTTGGGATCAAAGGTTCTTGGC
GGAAATGGCGTCGTTGGCCGCTCCATCGCCTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGTCGGCAAACACATCGTCCCCGATAAACCACTTCCGGCGGACGA
CGAACTGGTTTGGGATAATGGAACCCCTTTTCCCGAGCCCTGTATTGATCGCATCGCAGATACGGTTGGGAAGTTCGAAGCCTTGGCGTGGTTGTGTGGGGGACTGAGTT
TTTTCGCATCTCTAGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATTCCATTTGCGCCAAAAGTGTATCCGTATGACAACCTAAGAGTGGAGCTTGGTGGAGAA
CCCGAATCATAAATAGACATACTCGCGTTGAATGACCATACCGGCACCGTTTCTTCGGATACAAGTTGTTGAATTGTAAGCCTTTGGAATGTGCTGTGCTTCATAATAAT
TTATTTTGTTGCCTCTGATGAAATTTCTCTTTAGCAGTGTGTAAATCACTTCTATGTTTTGATTCTTAACAATGAGGGCCCTAAAGACTTAGGCATCCATGCTGAATAAG
TTATCATTTTTAGATGAGATGGTAAATTCTATGAAATTCTGTCACCTTGCAATTGAACTCAGATTGATTAATTATGTGTCTATTGGTAGTTTTATATGATTTTAAGTTTA
TCTCGAC
Protein sequenceShow/hide protein sequence
MAGKLCNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPADDELVWDNGTPFPEPCIDRIADTVGKFEALAWLCGGLSFFASLGFLAVWNDKASKIPFAPK
VYPYDNLRVELGGEPES