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Sed0017525 (gene) of Chayote v1 genome

Gene IDSed0017525
OrganismSechium edule (Chayote v1)
DescriptionTPD1 protein homolog 1-like
Genome locationLG14:21881789..21883119
RNA-Seq ExpressionSed0017525
SyntenySed0017525
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
GO:0009408 - response to heat (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022949891.1 TPD1 protein homolog 1-like [Cucurbita moschata]1.1e-5973.62Show/hide
Query:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS
        MN G    R F+ C   S FLA   V L  VQAAA     GI+WMSLQSS + R M+R+GSECSKD+V+VFQGQ APLPDGIP++ VQILNSC+SGCSIS
Subjt:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS

Query:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        NIH+KCGWFSSARLVNPR+F+R+ YDDCLIN+GKALGPGQTLSFQYANTFPYPLSVSSVTCSS
Subjt:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

XP_022978329.1 TPD1 protein homolog 1-like [Cucurbita maxima]2.8e-5875.16Show/hide
Query:  FCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKC
        F RFF   +  S FLA   V L  VQAAA     GI+WMSLQSS + R M+R+GSECSKDDV+VFQGQ APLPDGIP++ VQILNSC+SGCSISNIH+KC
Subjt:  FCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKC

Query:  GWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        GWFSSARLVNPR+F+R+ YDDCLIN+GKALGPGQTLSFQYANTF YPLSVSSVTCSS
Subjt:  GWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

XP_023544807.1 TPD1 protein homolog 1-like [Cucurbita pepo subsp. pepo]4.3e-5973.01Show/hide
Query:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS
        M GG    R F+ C   S FLA   V L  VQAAA     GI+WMSLQSS + R M+R+GSECSKD+V+VFQGQ APLPDGIP++ VQILNSC+SGCSIS
Subjt:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS

Query:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        NIH+KCGWFSSARLVNPR+F+R+ YDDCLIN+GKAL PGQTLSFQYANTFPYPLSVSSVTCSS
Subjt:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

XP_038880860.1 TPD1 protein homolog 1-like isoform X1 [Benincasa hispida]6.2e-5875.32Show/hide
Query:  FFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWF
        FF+  +W S F     VHL  VQAAA   R GI+ MSLQSS S +EM+RIGSECSKDDV++FQGQ  PLPDGIP Y VQILNSCAS CSISNIH+KCGWF
Subjt:  FFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWF

Query:  SSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        SSARLVNPR+F+R++YDDCL++NG+ALGPGQTLSFQYANTFPYPLSVSSVTCSS
Subjt:  SSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

XP_038880861.1 TPD1 protein homolog 1-like isoform X2 [Benincasa hispida]1.9e-5974.23Show/hide
Query:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS
        M GG  F RF   C  L+ FL    VHL  VQAAA   R GI+ MSLQSS S +EM+RIGSECSKDDV++FQGQ  PLPDGIP Y VQILNSCAS CSIS
Subjt:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS

Query:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        NIH+KCGWFSSARLVNPR+F+R++YDDCL++NG+ALGPGQTLSFQYANTFPYPLSVSSVTCSS
Subjt:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

TrEMBL top hitse value%identityAlignment
A0A0A0KL27 Uncharacterized protein2.1e-5668.9Show/hide
Query:  MNGGVVFCRF-FWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSI
        M GG  F RF  WF + +        VHL  +QAAA   R GI+ MSLQSS S +EM+RIGS C+KDD+++FQG   PLP GIP Y VQILNSCAS CSI
Subjt:  MNGGVVFCRF-FWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSI

Query:  SNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        SNIHVKCGWFSSARLVNPR+FKR++YDDCL+N+G+ALGPG+TLSFQYANTFPYPLSVSS TCSS
Subjt:  SNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

A0A1S3B0B6 TPD1 protein homolog 1-like isoform X22.5e-5770.99Show/hide
Query:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS
        M GG  F R F  C  L+ FL    VHL  +QAAA   R GI+ MSLQSS S +EM+RIGSECSK D+++FQG   PLP GIP Y VQILNSCAS CSIS
Subjt:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS

Query:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCS
        NIHVKCGWFSSARLVNPR+FKR++YDDCL+N+G+ALGPG+TLSFQYANTFPYPLSVSS TCS
Subjt:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCS

A0A5D3CRM1 TPD1 protein-like protein 1-like isoform X21.1e-5770.99Show/hide
Query:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS
        M GG  F R F  C  L+ FL    VHL  +QAAA   R GI+ MSLQSS S +EM+RIGSECSK+D+++FQG   PLP GIP Y VQILNSCAS CSIS
Subjt:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS

Query:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCS
        NIHVKCGWFSSARLVNPR+FKR++YDDCL+N+G+ALGPG+TLSFQYANTFPYPLSVSS TCS
Subjt:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCS

A0A6J1GDB1 TPD1 protein homolog 1-like5.4e-6073.62Show/hide
Query:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS
        MN G    R F+ C   S FLA   V L  VQAAA     GI+WMSLQSS + R M+R+GSECSKD+V+VFQGQ APLPDGIP++ VQILNSC+SGCSIS
Subjt:  MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSIS

Query:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        NIH+KCGWFSSARLVNPR+F+R+ YDDCLIN+GKALGPGQTLSFQYANTFPYPLSVSSVTCSS
Subjt:  NIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

A0A6J1ITT0 TPD1 protein homolog 1-like1.3e-5875.16Show/hide
Query:  FCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKC
        F RFF   +  S FLA   V L  VQAAA     GI+WMSLQSS + R M+R+GSECSKDDV+VFQGQ APLPDGIP++ VQILNSC+SGCSISNIH+KC
Subjt:  FCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKC

Query:  GWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS
        GWFSSARLVNPR+F+R+ YDDCLIN+GKALGPGQTLSFQYANTF YPLSVSSVTCSS
Subjt:  GWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058354.4e-0637.5Show/hide
Query:  YSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYD--DCLINNGKALGPGQTLSFQYANTFPYPL
        + V+++N C   C I N+ +KC  F  + LV+P   + L+    +C++N+G  L P QTLSF Y+NT  + L
Subjt:  YSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYD--DCLINNGKALGPGQTLSFQYANTFPYPL

Q1G3T1 TPD1 protein homolog 14.9e-4268.57Show/hide
Query:  DRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSV
        +RIG +CSKDD+++FQG   PLP G+P+Y+V+I NSC S C+I+ IHV CGWFSS RLVNPRVF+RL+YDDCL+N+G+ LGPGQ+LSFQYAN+F YPLSV
Subjt:  DRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSV

Query:  SSVTC
        +SV+C
Subjt:  SSVTC

Q2QR54 TPD1 protein homolog 1A2.3e-3153.15Show/hide
Query:  RIGSECS-KDDVLVFQGQKAPLPDGIPAYSVQILNSCASG------CSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTF
        R+   C+  DD+ ++QG+  PLP G+PAY+V ++N CA G      C+I+ IHV+CGWFSS  LV+PRVF+RL +DDCL+N+G+ L  G+T+SF+Y N+F
Subjt:  RIGSECS-KDDVLVFQGQKAPLPDGIPAYSVQILNSCASG------CSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTF

Query:  PYPLSVSSVTC
        PY LSVS  TC
Subjt:  PYPLSVSSVTC

Q6TLJ2 Protein TAPETUM DETERMINANT 12.8e-3762.73Show/hide
Query:  SREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPY
        S E +RIG +C   D++V Q    P+P+GIP Y V+I N C SGC IS IH+ CGWFSSA+L+NPRVFKR++YDDCL+NNGK L  G TLSF YANTFPY
Subjt:  SREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPY

Query:  PLSVSSVTCS
         LSV+ VTC+
Subjt:  PLSVSSVTCS

Q8S6P9 TPD1 protein homolog 1B4.2e-2547.47Show/hide
Query:  CSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTC
        CS+ +V+V+Q     LP GIP YSV+I+N C + C++ ++H+ CG F+SA LV+P  F+R+ ++DCL+  G  LGP + +SFQY+N+F YPL+V++V C
Subjt:  CSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein3.1e-0737.5Show/hide
Query:  YSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYD--DCLINNGKALGPGQTLSFQYANTFPYPL
        + V+++N C   C I N+ +KC  F  + LV+P   + L+    +C++N+G  L P QTLSF Y+NT  + L
Subjt:  YSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYD--DCLINNGKALGPGQTLSFQYANTFPYPL

AT1G32583.1 FUNCTIONS IN: molecular_function unknown3.5e-4368.57Show/hide
Query:  DRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSV
        +RIG +CSKDD+++FQG   PLP G+P+Y+V+I NSC S C+I+ IHV CGWFSS RLVNPRVF+RL+YDDCL+N+G+ LGPGQ+LSFQYAN+F YPLSV
Subjt:  DRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSV

Query:  SSVTC
        +SV+C
Subjt:  SSVTC

AT4G24972.1 tapetum determinant 12.0e-3862.73Show/hide
Query:  SREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPY
        S E +RIG +C   D++V Q    P+P+GIP Y V+I N C SGC IS IH+ CGWFSSA+L+NPRVFKR++YDDCL+NNGK L  G TLSF YANTFPY
Subjt:  SREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFSSARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPY

Query:  PLSVSSVTCS
         LSV+ VTC+
Subjt:  PLSVSSVTCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGTGGTGTTGTTTTCTGCAGATTTTTCTGGTTTTGTGTTTGGCTTTCATGGTTTCTTGCTATCATGGCTGTTCATTTGGGAGCAGTTCAGGCAGCTGCAAGTGT
AACAAGAGGTGGCATTGCTTGGATGTCTCTTCAATCTTCTATCAGTAGTAGAGAGATGGACCGAATTGGATCGGAATGTTCGAAAGACGACGTCCTAGTATTTCAAGGCC
AAAAAGCTCCACTTCCAGATGGGATTCCAGCATACAGTGTTCAGATATTAAATTCGTGTGCTTCAGGCTGCAGCATCTCCAACATTCATGTCAAATGTGGGTGGTTCAGC
TCAGCCAGATTGGTGAATCCTAGAGTTTTCAAGAGACTCAATTATGATGATTGCCTTATCAACAATGGCAAGGCTCTTGGTCCTGGTCAAACTCTGTCATTTCAATATGC
TAACACTTTTCCTTACCCTCTTTCTGTATCTTCTGTAACTTGTTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGTGGTGTTGTTTTCTGCAGATTTTTCTGGTTTTGTGTTTGGCTTTCATGGTTTCTTGCTATCATGGCTGTTCATTTGGGAGCAGTTCAGGCAGCTGCAAGTGT
AACAAGAGGTGGCATTGCTTGGATGTCTCTTCAATCTTCTATCAGTAGTAGAGAGATGGACCGAATTGGATCGGAATGTTCGAAAGACGACGTCCTAGTATTTCAAGGCC
AAAAAGCTCCACTTCCAGATGGGATTCCAGCATACAGTGTTCAGATATTAAATTCGTGTGCTTCAGGCTGCAGCATCTCCAACATTCATGTCAAATGTGGGTGGTTCAGC
TCAGCCAGATTGGTGAATCCTAGAGTTTTCAAGAGACTCAATTATGATGATTGCCTTATCAACAATGGCAAGGCTCTTGGTCCTGGTCAAACTCTGTCATTTCAATATGC
TAACACTTTTCCTTACCCTCTTTCTGTATCTTCTGTAACTTGTTCTTCTTAACTTGACCAGCCCATGTGGGCCATCATAATTGTGAATTGTCATTTAGTTTTCAAAGAAT
TTCATCTTCTGGGTTATATATATAAATTTATAATACATGGTTGAGGTGTGAATTCATATTCTTCTCACATTATAACATTTGATAAGTCATGAAGTTCAC
Protein sequenceShow/hide protein sequence
MNGGVVFCRFFWFCVWLSWFLAIMAVHLGAVQAAASVTRGGIAWMSLQSSISSREMDRIGSECSKDDVLVFQGQKAPLPDGIPAYSVQILNSCASGCSISNIHVKCGWFS
SARLVNPRVFKRLNYDDCLINNGKALGPGQTLSFQYANTFPYPLSVSSVTCSS