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Sed0017526 (gene) of Chayote v1 genome

Gene IDSed0017526
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:39414275..39414788
RNA-Seq ExpressionSed0017526
SyntenySed0017526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035234.1 hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa]4.5e-2583.54Show/hide
Query:  MAARCVPPSAPSTIVKPL-HTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD
        M ARCVPPSAPSTIV+PL  TP+  EDYETVKPQL +RKRLVFGG+EVKSCLPKGFRRSSAPSRFVNYHT GGCS T D
Subjt:  MAARCVPPSAPSTIVKPL-HTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD

KAE8646888.1 hypothetical protein Csa_020968, partial [Cucumis sativus]4.5e-3376.64Show/hide
Query:  MSMSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCS
        M M+SLFP F IYL   LL+SSPT SM ARCVPPSAPSTIV+PL TP+  E YETVKPQL +RKRLVFGG+EVKSCLPKGFRRSSAPSRFVNYHT GGCS
Subjt:  MSMSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCS

Query:  STADSTE
         T D ++
Subjt:  STADSTE

KAF3961747.1 hypothetical protein CMV_013666 [Castanea mollissima]2.9e-1655.24Show/hide
Query:  MSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLDRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD
        MS+ F  + + L + LL+SS   +MAAR +P SAPSTIV+PL   E +DY T+KP    K  VF G EVKSCLPKGFR SSAPSRFVNYH  GG  +   
Subjt:  MSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLDRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD

Query:  STETP
        S + P
Subjt:  STETP

KAG6570806.1 hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3682.08Show/hide
Query:  MSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLDRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD
        M+SLFP FL YL   LL+SSP+ SMAARCVPPSAPSTIV PL TPE EDYETVKPQL+RKRLVFGG+EVKSCLPKGFRRSSAPSRFVNYHT GGCSST D
Subjt:  MSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLDRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD

Query:  -STETP
         S  TP
Subjt:  -STETP

PON66506.1 hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii]2.2e-1653.77Show/hide
Query:  MSMS-SLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLD-RKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG---
        MSM+ SL+ + L+Y  I LL+SS  +SMA R +P SAPST+V+PL T   +DY +++P L+  +  VF G E K CLPKGFR +SAPSRFVNYH  G   
Subjt:  MSMS-SLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLD-RKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG---

Query:  -GCSST
         GCSS+
Subjt:  -GCSST

TrEMBL top hitse value%identityAlignment
A0A0A0KDD3 Uncharacterized protein4.9e-3379.41Show/hide
Query:  MSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSST
        M+SLFP F IYL   LL+SSPT SM ARCVPPSAPSTIV+PL TP+  E YETVKPQL +RKRLVFGG+EVKSCLPKGFRRSSAPSRFVNYHT GGCS T
Subjt:  MSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSST

Query:  AD
         D
Subjt:  AD

A0A2P5CZN8 Uncharacterized protein (Fragment)1.1e-1653.77Show/hide
Query:  MSMS-SLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLD-RKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG---
        MSM+ SL+ + L+Y  I LL+SS  +SMA R +P SAPST+V+PL T   +DY +++P L+  +  VF G E K CLPKGFR +SAPSRFVNYH  G   
Subjt:  MSMS-SLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLD-RKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG---

Query:  -GCSST
         GCSS+
Subjt:  -GCSST

A0A2P5FTP0 Uncharacterized protein1.9e-1653.77Show/hide
Query:  MSMS-SLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLD-RKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG---
        MSM+ SL+ + L+Y  I LL+SS  +SMA R +P SAPST+V+PL T   +DY +++P L+  +  VF G E K CLPKGFR +SAPSRFVNYH  G   
Subjt:  MSMS-SLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLD-RKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG---

Query:  -GCSST
         GCSS+
Subjt:  -GCSST

A0A314ZL66 Uncharacterized protein9.2e-1656.12Show/hide
Query:  SSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQ-LDRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG-GCSS
        SS+F + LIY  +F       +S+AAR +P SAPST+V+PL T   + Y ++KPQ L+ K+ VF G+EVK CLPKGFR +SAPSR+VNYHT G GCSS
Subjt:  SSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQ-LDRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFG-GCSS

A0A5D3DGK4 Uncharacterized protein2.2e-2583.54Show/hide
Query:  MAARCVPPSAPSTIVKPL-HTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD
        M ARCVPPSAPSTIV+PL  TP+  EDYETVKPQL +RKRLVFGG+EVKSCLPKGFRRSSAPSRFVNYHT GGCS T D
Subjt:  MAARCVPPSAPSTIVKPL-HTPE-PEDYETVKPQL-DRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGTCTTCTCTTTTCCCATTATTCCTCATTTACCTCTTTATTTTCCTACTCGTTTCTTCTCCCACACTATCCATGGCTGCCCGGTGCGTCCCACCGAGCGCGCC
TAGCACCATCGTTAAACCACTCCACACGCCCGAGCCCGAAGACTATGAGACTGTAAAGCCTCAGCTGGACCGGAAGAGGCTCGTTTTTGGTGGCAGTGAAGTCAAAAGCT
GCCTCCCTAAAGGCTTCCGTCGCTCGTCTGCGCCTAGCCGCTTTGTTAACTACCATACTTTTGGCGGCTGTTCTTCAACCGCTGACTCTACCGAGACTCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAATGTCAATGTCTTCTCTTTTCCCATTATTCCTCATTTACCTCTTTATTTTCCTACTCGTTTCTTCTCCCACACTATCCATGGCTGCCCGGTGCGTCCCACCGAGCGCG
CCTAGCACCATCGTTAAACCACTCCACACGCCCGAGCCCGAAGACTATGAGACTGTAAAGCCTCAGCTGGACCGGAAGAGGCTCGTTTTTGGTGGCAGTGAAGTCAAAAG
CTGCCTCCCTAAAGGCTTCCGTCGCTCGTCTGCGCCTAGCCGCTTTGTTAACTACCATACTTTTGGCGGCTGTTCTTCAACCGCTGACTCTACCGAGACTCCTTGAGAAT
AGCACACATTATATGTTGTTCAATTTTTGTTGTATATGCTTCCTCTTGTTTTTTTTAATATGTTGCTCATATAATTTACTTTTGTTTACTGGATTCTTATTTGTCTCTCT
CTTTATGTATGATTTGTTCTCCAAGAATTGTGGCACTCCAAGTCATGAAGCTTGATTATATTATATGATTAATT
Protein sequenceShow/hide protein sequence
MSMSSLFPLFLIYLFIFLLVSSPTLSMAARCVPPSAPSTIVKPLHTPEPEDYETVKPQLDRKRLVFGGSEVKSCLPKGFRRSSAPSRFVNYHTFGGCSSTADSTETP