; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017530 (gene) of Chayote v1 genome

Gene IDSed0017530
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L12, chloroplastic-like
Genome locationLG03:812633..813190
RNA-Seq ExpressionSed0017530
SyntenySed0017530
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000206 - Ribosomal protein L7/L12
IPR008932 - Ribosomal protein L7/L12, oligomerisation
IPR013823 - Ribosomal protein L7/L12, C-terminal
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR036235 - Ribosomal protein L7/L12, oligomerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033112.1 50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-6886.39Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+STLTTLRSP HL  SH S S+ S   T+LQ PF+ S    SHRAT LRPI+AVSAPEKIEKLGADIS+LTLEEARILVDFLQDKLGVSAA+FAPA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP AAAGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_022960313.1 50S ribosomal protein L12, chloroplastic-like [Cucurbita moschata]2.6e-6886.39Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+STLTTLRSP HL  SH S S+ S   T+LQ PF+ S    SHRAT LRPI+AVSAPEKIEKLGADIS+LTLEEARILVDFLQDKLGVSAA+FAPA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP AAAGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_022989905.1 50S ribosomal protein L12, chloroplastic [Cucurbita maxima]1.3e-6785.86Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+STLT+LRSP HL  SH S S+ S   T+LQ PF+ S    SHRATLLRPI+AVSAPEKIEKLGADIS+LTLEEARILVDFLQDKLGVSAA+FAPA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
         VVAAP AAAGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_023536532.1 50S ribosomal protein L12, chloroplastic-like [Cucurbita pepo subsp. pepo]2.6e-6886.39Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+STLTTLRSP+HL  SH S S+ S   T+LQ PF+ S    SHRAT LRPI+AVSAPEKIEKLGADIS+LTLEEARILVDFLQDKLGVSAA+FAPA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP AAAGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_038890576.1 50S ribosomal protein L12, chloroplastic-like [Benincasa hispida]1.3e-6482.81Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+S L TL SPSHL  SH S S+HS K T+LQ P H S    SHRAT LRPI+A+SAPEKIEKLG+DIS+LTLEEAR+LVDFLQDKLGVSAASFAPA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP   A G+AAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

TrEMBL top hitse value%identityAlignment
A0A5A7T262 50S ribosomal protein L124.3e-6180.85Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPAAVVA
        MAS++STL TL +P  L  SH   S HS + T+L  P+     RATLLRPI+AVSAPEKIEKLG+DISSLTLEEAR+LVDFLQDKLGVSAA+FAPAAVVA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPAAVVA

Query:  AP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AP  A  GDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1BXR2 50S ribosomal protein L12, chloroplastic-like3.2e-6482.9Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS-----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAP
        MAST+STL TLRSPS+L  S  S S+HS K +++Q PF+ S     SHRATLLRPI+AVSAPEKIEKLG+DIS+LTLEEAR+LVDFLQDKLGVSAA+FAP
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS-----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAP

Query:  AAVVAAP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AAVVAAP  A AGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AAVVAAP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1H8H9 50S ribosomal protein L12, chloroplastic-like1.2e-6886.39Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+STLTTLRSP HL  SH S S+ S   T+LQ PF+ S    SHRAT LRPI+AVSAPEKIEKLGADIS+LTLEEARILVDFLQDKLGVSAA+FAPA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP AAAGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1JNN0 50S ribosomal protein L12, chloroplastic6.2e-6885.86Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+STLT+LRSP HL  SH S S+ S   T+LQ PF+ S    SHRATLLRPI+AVSAPEKIEKLGADIS+LTLEEARILVDFLQDKLGVSAA+FAPA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHS----SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
         VVAAP AAAGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP-AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1JTI3 50S ribosomal protein L12, chloroplastic6.6e-6282.98Show/hide
Query:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPAAVVA
        MAST+STL TLR+PS L  SH S S+ S K T+L  P    SHRAT LRPI+AVSAPEKIEKLG+DIS+LTLEEARILVDFLQDKLGVSAA+FAPAAVVA
Subjt:  MASTISTLTTLRSPSHLPISHLS-SSHSPKFTSLQLPFHHSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPAAVVA

Query:  AP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AP   A GD AAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALT+LALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKI IV
Subjt:  AP--AAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

SwissProt top hitse value%identityAlignment
P02398 50S ribosomal protein L12, chloroplastic3.5e-5269.43Show/hide
Query:  MASTISTLTTLRSPSHLPISHLSSSHSPKFTS-LQLPFHH-------SSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASF
        MA+T +T+ TL  PS    SH +SS  PK    LQ PF         SS R T LRPI+AV APEKIE+LG  +S LTLEEAR+LVD+LQDKLGVSAASF
Subjt:  MASTISTLTTLRSPSHLPISHLSSSHSPKFTS-LQLPFHH-------SSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASF

Query:  APAAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        APAA VAAP A  D AA AVEEKTEFDV I+EVPSNARI+VIK+VRALTSL LKEAKELIEGLPKK KEG+SK++AEDAKKQLE+AGAK++IV
Subjt:  APAAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

P24929 50S ribosomal protein L12, chloroplastic2.3e-5168.25Show/hide
Query:  MASTISTLTTLRSPSHLPISHLSSSHSPKFTSLQLP-----FHHSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA
        MAST+ST+ TLRSPS    S   +S      +L+ P      HH   RAT LRP++AV APEK+ +LG +IS+LTL +A+ LV++LQDKLGV+AASFAPA
Subjt:  MASTISTLTTLRSPSHLPISHLSSSHSPKFTSLQLP-----FHHSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPA

Query:  AVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        AV AAP AA +A A  VEEKTEFDVVI+EVPSNARIA IK+VRALTSLALKEAKELIEGLPKKFKEG+SK+EAEDAKKQLEEAGAK++I
Subjt:  AVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

P36210 50S ribosomal protein L12-1, chloroplastic3.6e-4965.62Show/hide
Query:  ASTISTLTTLRSPSHLPISHLSSSHSP-KFTSLQLPFHHS-------SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFA
        ++T+S  TT+RS S+  ++  S +H P + T+++ P           +HRAT LRPI+AV APEKIEK+G++ISSLTLEEARILVD+LQDK GVS  S A
Subjt:  ASTISTLTTLRSPSHLPISHLSSSHSP-KFTSLQLPFHHS-------SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFA

Query:  P-AAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        P AA VAAPA  G  AA  VEE+TEFDVVI EVPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  P-AAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

P36212 50S ribosomal protein L12-3, chloroplastic3.9e-5169.15Show/hide
Query:  ASTISTLTTLRSPSHLPISHLSSSH-SPKFTSLQLPFH---HSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAP-AA
        ++T+S  TT+RS S  P++  S+ H   K T+++ PF     SSHRA  LRPISAV APEKIEK+G++ISSLTLEEARILVD+LQDK GVS  S AP AA
Subjt:  ASTISTLTTLRSPSHLPISHLSSSH-SPKFTSLQLPFH---HSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAP-AA

Query:  VVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
         VAAPA  G  AA  VEE+TEFDVVI EVPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  VVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

P36688 50S ribosomal protein L12, chloroplastic1.3e-5169.11Show/hide
Query:  MASTISTLTTLRSPSHLPISHLSSSHS----PKFTSLQLPFHH---SSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFA
        MAST+ST+ TLRSPS    S  +S+H+    PK T L+ P       + RAT LRP++AV APEK+ +LG +IS+LTL +A+ LV++LQDKLGV+AASFA
Subjt:  MASTISTLTTLRSPSHLPISHLSSSHS----PKFTSLQLPFHH---SSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFA

Query:  PAAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        PAAVVAAP AA +A A  VEEKTEFDVVI+EVPSNARIA IK+VRALTSLALKEAKELIEGLPKKFKEG+SK+EAEDAKKQLEEAGAK++I
Subjt:  PAAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

Arabidopsis top hitse value%identityAlignment
AT3G27830.1 ribosomal protein L12-A2.6e-5065.62Show/hide
Query:  ASTISTLTTLRSPSHLPISHLSSSHSP-KFTSLQLPFHHS-------SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFA
        ++T+S  TT+RS S+  ++  S +H P + T+++ P           +HRAT LRPI+AV APEKIEK+G++ISSLTLEEARILVD+LQDK GVS  S A
Subjt:  ASTISTLTTLRSPSHLPISHLSSSHSP-KFTSLQLPFHHS-------SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFA

Query:  P-AAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        P AA VAAPA  G  AA  VEE+TEFDVVI EVPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  P-AAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

AT3G27840.1 ribosomal protein L12-B1.1e-4054.4Show/hide
Query:  ASTISTLTTLRSPSHLPISHLSSSH--SPKFTSLQLPFHHS-------SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASF
        A+T+S  TT+RS S    S L+S+H    +  S++ PF          SHRA  L PISAV  P+KI+K+G++ISSLTLEE+RILVD++QDK GVS    
Subjt:  ASTISTLTTLRSPSHLPISHLSSSH--SPKFTSLQLPFHHS-------SHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASF

Query:  APAAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        APAA    P      A  +VE +T FDVVI +VP   RIAVI ++RA+TSL+L E+KELIEG PKKFKEG++K+EAE+ K QLEEAGAK++IV
Subjt:  APAAVVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

AT3G27850.1 ribosomal protein L12-C2.7e-5269.15Show/hide
Query:  ASTISTLTTLRSPSHLPISHLSSSH-SPKFTSLQLPFH---HSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAP-AA
        ++T+S  TT+RS S  P++  S+ H   K T+++ PF     SSHRA  LRPISAV APEKIEK+G++ISSLTLEEARILVD+LQDK GVS  S AP AA
Subjt:  ASTISTLTTLRSPSHLPISHLSSSH-SPKFTSLQLPFH---HSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAP-AA

Query:  VVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
         VAAPA  G  AA  VEE+TEFDVVI EVPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  VVAAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

AT4G36420.1 Ribosomal protein L12 family protein6.6e-1437.32Show/hide
Query:  SAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVS----AASFAPAAVV----AAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTS
        S  +  E + K+  ++S+LTL E   L + L+ KL +S     A+  P   +    A+ +A G+   +  E KT FDV+++   + ++I VIK VR +T+
Subjt:  SAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVS----AASFAPAAVV----AAPAAAGDAAAEAVEEKTEFDVVIEEVPSNARIAVIKSVRALTS

Query:  LALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        L LKEAK+L+E  P   K+G+SKEEAE   ++L+  GAK+A+
Subjt:  LALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

AT4G37660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.8e-1135.06Show/hide
Query:  HHSSHRATLLRPISAVSAPE----KIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPAAVVAAPAAAGDAAAEA---VEEKTEFDVVIEEVPSNAR
        H ++  ++  R + AV++PE    K+E++  D+  L   E          K+G++    A    VA   + GDA+A       EKT FDV +E+  + ++
Subjt:  HHSSHRATLLRPISAVSAPE----KIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPAAVVAAPAAAGDAAAEA---VEEKTEFDVVIEEVPSNAR

Query:  IAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        I VIK +RA T L LKEAK L+E  P   K G++KEEAE   ++L+  GA +A+
Subjt:  IAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACAATCTCCACTCTCACCACTCTCCGTTCCCCTTCTCACCTTCCCATTTCCCATCTCTCTTCCTCTCACTCTCCCAAATTCACATCCCTCCAACTCCCATT
CCACCATTCCTCCCACCGCGCCACCCTCCTCCGCCCCATCTCCGCCGTGTCCGCCCCCGAGAAAATCGAAAAGCTCGGCGCCGACATCTCCAGCCTCACCCTTGAAGAAG
CCCGCATTCTGGTGGACTTCCTCCAGGACAAGCTGGGTGTCTCCGCCGCCTCCTTCGCCCCTGCGGCAGTCGTGGCAGCGCCAGCGGCTGCCGGGGATGCGGCTGCCGAG
GCGGTCGAGGAGAAGACGGAGTTCGACGTGGTGATTGAGGAGGTGCCAAGTAATGCCAGAATTGCAGTGATCAAGTCAGTGAGAGCATTGACAAGCTTGGCTCTGAAGGA
AGCCAAAGAACTAATTGAAGGTCTGCCCAAGAAGTTCAAGGAAGGAATTTCCAAAGAAGAGGCTGAGGATGCAAAGAAACAGCTTGAAGAAGCTGGAGCTAAAATCGCCA
TTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACAATCTCCACTCTCACCACTCTCCGTTCCCCTTCTCACCTTCCCATTTCCCATCTCTCTTCCTCTCACTCTCCCAAATTCACATCCCTCCAACTCCCATT
CCACCATTCCTCCCACCGCGCCACCCTCCTCCGCCCCATCTCCGCCGTGTCCGCCCCCGAGAAAATCGAAAAGCTCGGCGCCGACATCTCCAGCCTCACCCTTGAAGAAG
CCCGCATTCTGGTGGACTTCCTCCAGGACAAGCTGGGTGTCTCCGCCGCCTCCTTCGCCCCTGCGGCAGTCGTGGCAGCGCCAGCGGCTGCCGGGGATGCGGCTGCCGAG
GCGGTCGAGGAGAAGACGGAGTTCGACGTGGTGATTGAGGAGGTGCCAAGTAATGCCAGAATTGCAGTGATCAAGTCAGTGAGAGCATTGACAAGCTTGGCTCTGAAGGA
AGCCAAAGAACTAATTGAAGGTCTGCCCAAGAAGTTCAAGGAAGGAATTTCCAAAGAAGAGGCTGAGGATGCAAAGAAACAGCTTGAAGAAGCTGGAGCTAAAATCGCCA
TTGTTTAA
Protein sequenceShow/hide protein sequence
MASTISTLTTLRSPSHLPISHLSSSHSPKFTSLQLPFHHSSHRATLLRPISAVSAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAASFAPAAVVAAPAAAGDAAAE
AVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV