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Sed0017532 (gene) of Chayote v1 genome

Gene IDSed0017532
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG04:47045232..47045754
RNA-Seq ExpressionSed0017532
SyntenySed0017532
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]5.5e-3479.52Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND
        M L HLLKR++GVSA+PKGYCAVYVG+ QKKRF+IPI +LN+PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF + IS +ND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]3.2e-3487.5Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISR
        MG+  LLKR+QGVS IPKGYCAVYVGE QKKRFVIPITHLNQ CFQELL QTEE+FGYHHPMGGLTIHCRDDIF DLISR
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISR

KAE8645661.1 hypothetical protein Csa_020412 [Cucumis sativus]5.9e-2876.25Show/hide
Query:  HLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLNDQ
        H +KR   VS +PKGYCAVYVGE QKKRFVIPIT+LNQPCFQ+LL QT EEF Y+HPMGGLT HC DDIF DLIS LN+Q
Subjt:  HLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLNDQ

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]2.2e-3585.54Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND
        M L HLLKRSQGVS+IPKGYCAVYVGE QKKRF+IPI++LNQPCFQELL QTEEEFGYHHPMGGLTIHC+D IF +LISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]9.0e-3787.95Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND
        MGL  LLKR+QGVSA+PKGYCAVYVGE QKKRFVIPI++LNQPCFQELLCQ EEEFGY+HPMGGLTIHCRDDIF DLISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein1.7e-3685.54Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND
        M L HLLKR+QGVSA+PKGYCAVYVGE QKKRFVIPIT+LN+PCFQ+LLCQTEEEFGY+HPMGGLTIHCRDDIF DLIS +ND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND

A0A0A0K5U4 Uncharacterized protein1.1e-3585.54Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND
        M L HLLKRSQGVS+IPKGYCAVYVGE QKKRF+IPI++LNQPCFQELL QTEEEFGYHHPMGGLTIHC+D IF +LISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND

A0A0A0K5V1 Uncharacterized protein6.7e-3074.16Show/hide
Query:  MGLFHLLKRS-----QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLNDQ
        MGL  LL+RS     Q VS +PKGYCAVYVGE QKKRFVIPIT+LNQPCFQ+LL QT EEF Y+HPMGGLT HC DDIF DLIS LN+Q
Subjt:  MGLFHLLKRS-----QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLNDQ

A0A5A7U363 Auxin-induced protein 15A-like2.6e-3479.52Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND
        M L HLLKR++GVSA+PKGYCAVYVG+ QKKRF+IPI +LN+PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF + IS +ND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND

A0A6J1C4W2 auxin-responsive protein SAUR24-like4.4e-3787.95Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND
        MGL  LLKR+QGVSA+PKGYCAVYVGE QKKRFVIPI++LNQPCFQELLCQ EEEFGY+HPMGGLTIHCRDDIF DLISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLND

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.2e-2259.74Show/hide
Query:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLN
        L + +  VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D FI++ SRL+
Subjt:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLN

Q9FJF7 Auxin-responsive protein SAUR221.3e-2258.54Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL
        +G   +L RS   VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++E+EFG+ HPMGGLTI C +D FI++ SRL
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL

Q9FJF9 Auxin-responsive protein SAUR211.1e-2158.02Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL
        +G   +L RS   SA PKG+ AVYVGE QKKR+++P+++L+QP FQ LL ++EEEFG+ HPMGGLTI C +D FI++ SRL
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL

Q9FJG0 Auxin-responsive protein SAUR205.0e-2259.26Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISR
        +G   +L RS    SA PKG+ AVYVGE QKKR+++PI++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D FI++ SR
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISR

Q9FK62 Auxin-responsive protein SAUR244.5e-2359.76Show/hide
Query:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL
        +G   +L RS G  SA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D FI++ SRL
Subjt:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.1e-2361.73Show/hide
Query:  LFHLLKRSQGVSAIPKGYCAVYVGE-GQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLN
        L   L  S    AIPKG+ AVYVGE  QK+RFV+P+T+L+ PCFQ+LL + EEEFG+ HPMGGLTI C + IFIDL SRL+
Subjt:  LFHLLKRSQGVSAIPKGYCAVYVGE-GQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLN

AT5G18020.1 SAUR-like auxin-responsive protein family3.5e-2359.26Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISR
        +G   +L RS    SA PKG+ AVYVGE QKKR+++PI++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D FI++ SR
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISR

AT5G18050.1 SAUR-like auxin-responsive protein family9.3e-2458.54Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL
        +G   +L RS   VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++E+EFG+ HPMGGLTI C +D FI++ SRL
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL

AT5G18060.1 SAUR-like auxin-responsive protein family1.6e-2359.74Show/hide
Query:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLN
        L + +  VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D FI++ SRL+
Subjt:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLN

AT5G18080.1 SAUR-like auxin-responsive protein family3.2e-2459.76Show/hide
Query:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL
        +G   +L RS G  SA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D FI++ SRL
Subjt:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTTTCCATCTTCTCAAAAGAAGTCAAGGAGTTTCAGCAATTCCCAAGGGCTATTGTGCAGTCTATGTCGGAGAGGGCCAAAAGAAGCGGTTCGTGATCCCGAT
TACTCACTTGAATCAACCGTGTTTTCAAGAGTTGCTTTGTCAGACTGAGGAAGAATTCGGTTACCATCATCCGATGGGCGGTCTTACTATTCATTGCAGAGATGATATCT
TCATTGATCTCATCTCCCGTTTGAATGATCAATGA
mRNA sequenceShow/hide mRNA sequence
CAAGTTTTTGCATTCTAAGTCGAAACAAACTTCCTTCTCTCCCGTTTTACGATCTTCTTGTTGCTCTAAAACATGGGGCTTTTCCATCTTCTCAAAAGAAGTCAAGGAGT
TTCAGCAATTCCCAAGGGCTATTGTGCAGTCTATGTCGGAGAGGGCCAAAAGAAGCGGTTCGTGATCCCGATTACTCACTTGAATCAACCGTGTTTTCAAGAGTTGCTTT
GTCAGACTGAGGAAGAATTCGGTTACCATCATCCGATGGGCGGTCTTACTATTCATTGCAGAGATGATATCTTCATTGATCTCATCTCCCGTTTGAATGATCAATGAGAG
ATGTTAACAGTTATAGTATACAACCAATCTAATAGAATATAGACATTAGAAATAACCAAAACCATGTACATTTTTTTCATTTTCCTCACTTTTTTTGTTTCCTTTAGTGG
GGAGTAAAATAATGTTCCCCTGCTAGAGGAAGTTACCCAATGATGAAAATGAAATGGCCACACTTTTACAGGAAATTTAAGAG
Protein sequenceShow/hide protein sequence
MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFIDLISRLNDQ