; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017540 (gene) of Chayote v1 genome

Gene IDSed0017540
OrganismSechium edule (Chayote v1)
DescriptionF-box domain-containing protein
Genome locationLG01:7045349..7048677
RNA-Seq ExpressionSed0017540
SyntenySed0017540
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23778.1 F-box protein SKP2A isoform X1 [Cucumis melo var. makuwa]1.2e-14773.39Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV
        MVG+ NLRTE LNLCFEKLMML      + G +GVKMD G +IAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGL H+SLSWCKKNMNNLV
Subjt:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV

Query:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A
        LSL PKF KLQ LILRQD+PQL+D AVETIASYCHDLQ                                                             A
Subjt:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A

Query:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
         SDTALQAIGQYCNHLQ VNLGWCE V+DVGVMSLAYGCPDLR+LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Subjt:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG

Query:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIAL
         GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACAV AHR  + L
Subjt:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIAL

XP_004144256.1 F-box protein SKP2A isoform X1 [Cucumis sativus]2.2e-14973.21Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV
        MVG+ NLRTE LNLCFEK MML      + G KGV+MD G ++AGWKDIPMELLLQI+SLVDDRTVIVASGVCRGWRDAICFGLAH+SLSWC+KNMNNLV
Subjt:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV

Query:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A
        LSL PKFA+LQ LILRQD+PQL DDAVETIASYCHDLQ                                                             A
Subjt:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A

Query:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
         SDTALQAIGQYCNHLQ VNLGWCE V+DVGVMSLAYGCPDLR LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Subjt:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG

Query:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
         GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNL+SVHCACAV AHRA  A LHSAH
Subjt:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

XP_008441569.1 PREDICTED: F-box protein SKP2A isoform X1 [Cucumis melo]5.9e-15073.74Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV
        MVG+ NLRTE LNLCFEKLMML      + G +GVKMD G +IAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGL H+SLSWCKKNMNNLV
Subjt:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV

Query:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A
        LSL PKF KLQ LILRQD+PQL+D AVETIASYCHDLQ                                                             A
Subjt:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A

Query:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
         SDTALQAIGQYCNHLQ VNLGWCE V+DVGVMSLAYGCPDLR+LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Subjt:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG

Query:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
         GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACAV AHRA  A  HSAH
Subjt:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

XP_023550072.1 F-box protein SKP2A-like [Cucurbita pepo subsp. pepo]3.6e-14773.28Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV
        MVG+ NLRTE LNLCFEKLMML      + G KGVKMD G +IAGWKDIPMELLLQI+SLVDDRTVIVASGVC GWRDAICFGL H+SLSWCKKNMNNLV
Subjt:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV

Query:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A
        LSL PKFAKLQTLILRQD+PQLADDAVETIASYCHDLQ                                                             A
Subjt:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A

Query:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
         SDTALQAIGQYCN LQ VNLGWCE VSDVGVMSLAYGC DLR+LDLCGCVLITDDSVIA+ANMCPHLRSLGLYYCQNITDRAMYSLAHSCIK+KPTKWG
Subjt:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG

Query:  -PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
          GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACAV AHRAP A  + AH
Subjt:  -PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

XP_038884756.1 F-box protein SKP2A isoform X1 [Benincasa hispida]5.7e-15374.87Show/hide
Query:  MVGQGNLRTEALNLCFEKLMM-------LEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNL
        MVG+ NLRTE LNLCFEKLMM       ++ G KGVKMD GL IAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGL H+SLSWCKKNMNNL
Subjt:  MVGQGNLRTEALNLCFEKLMM-------LEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNL

Query:  VLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------
        VLSL PKFAKLQTLILRQD+PQLADDAVETIASYCHDLQ                                                             
Subjt:  VLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------

Query:  ATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW
        A SDTALQAIGQYCNHLQ VNLGWCE VSDVGVMSLAYGCPDLR+LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSC KNKPTKW
Subjt:  ATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW

Query:  GPGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
        G GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACA+ AHRAP A  HSAH
Subjt:  GPGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

TrEMBL top hitse value%identityAlignment
A0A0A0KFD6 F-box domain-containing protein1.1e-14973.21Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV
        MVG+ NLRTE LNLCFEK MML      + G KGV+MD G ++AGWKDIPMELLLQI+SLVDDRTVIVASGVCRGWRDAICFGLAH+SLSWC+KNMNNLV
Subjt:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV

Query:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A
        LSL PKFA+LQ LILRQD+PQL DDAVETIASYCHDLQ                                                             A
Subjt:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A

Query:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
         SDTALQAIGQYCNHLQ VNLGWCE V+DVGVMSLAYGCPDLR LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Subjt:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG

Query:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
         GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNL+SVHCACAV AHRA  A LHSAH
Subjt:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

A0A1S3B3Q3 F-box protein SKP2A isoform X12.8e-15073.74Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV
        MVG+ NLRTE LNLCFEKLMML      + G +GVKMD G +IAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGL H+SLSWCKKNMNNLV
Subjt:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV

Query:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A
        LSL PKF KLQ LILRQD+PQL+D AVETIASYCHDLQ                                                             A
Subjt:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A

Query:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
         SDTALQAIGQYCNHLQ VNLGWCE V+DVGVMSLAYGCPDLR+LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Subjt:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG

Query:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
         GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACAV AHRA  A  HSAH
Subjt:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

A0A5D3DJV0 F-box protein SKP2A isoform X15.9e-14873.39Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV
        MVG+ NLRTE LNLCFEKLMML      + G +GVKMD G +IAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGL H+SLSWCKKNMNNLV
Subjt:  MVGQGNLRTEALNLCFEKLMML------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLV

Query:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A
        LSL PKF KLQ LILRQD+PQL+D AVETIASYCHDLQ                                                             A
Subjt:  LSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------A

Query:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
         SDTALQAIGQYCNHLQ VNLGWCE V+DVGVMSLAYGCPDLR+LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Subjt:  TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG

Query:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIAL
         GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACAV AHR  + L
Subjt:  PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIAL

A0A6J1FF47 F-box protein SKP2A-like2.9e-14772.89Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML--------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNN
        MVG+ NLRTE LNLCFEKLMML        + G KGVKMD G +IAGWKDIPMELLLQI+SLVDDRTVIVASGVC GWRDAICFGL H+SLSWCKKNMNN
Subjt:  MVGQGNLRTEALNLCFEKLMML--------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNN

Query:  LVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ------------------------------------------------------------
        LVLSL PKFAKLQTLILRQD+PQLADDAVETIASYCHDLQ                                                            
Subjt:  LVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ------------------------------------------------------------

Query:  -ATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTK
         A SDTALQAIGQYCN LQ VNLGWCE VSDVGVMSLAYGC DLR+LDLCGCVLITDDSVIA+ANMCPHLRSLGLYYCQNITDRAMYSLAHSCIK+KPTK
Subjt:  -ATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTK

Query:  WG-PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
        WG  GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACAV AHRAP A  + AH
Subjt:  WG-PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

A0A6J1JU65 F-box protein SKP2A-like3.8e-14772.7Show/hide
Query:  MVGQGNLRTEALNLCFEKLMML---------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMN
        MVG+ NLRTE LNLCFEKLMML         + G KGVKMD G +IAGWKDIPMELLLQI+SLVDDRTVIVASGVC GWRDAICFGL H+SLSWCKKNMN
Subjt:  MVGQGNLRTEALNLCFEKLMML---------EFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMN

Query:  NLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-----------------------------------------------------------
        NLVLSL PKFAKLQTLILRQD+PQLADDAVETIASYCHDLQ                                                           
Subjt:  NLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQ-----------------------------------------------------------

Query:  --ATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPT
          A SDTALQAIGQYCN LQ VNLGWCE VSDVGVMSLAYGC DLR+LDLCGCVLITDDSVIA+ANMCPHLRSLGLYYCQNITDRAMYSLAHSCIK+KPT
Subjt:  --ATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPT

Query:  KWG-PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
        KWG  GK KNDDDGLRTLNISQCTALTP AVQAVCDSFP LHTCSGRHSLIMSGCLNLMSVHCACAV AHRAP A  + AH
Subjt:  KWG-PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

SwissProt top hitse value%identityAlignment
A6H779 F-box/LRR-repeat protein 21.6e-1730Show/hide
Query:  CFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPD
        C  L +++LSWC +   + V +LV     L+ L+LR    QL D+A++ I +YCH+L +                  +NL  C +V+D GV+ L  GCP 
Subjt:  CFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPD

Query:  LRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCS
        L++L L GC  +TD S+ ALA  CP L+ L    C ++TD     LA +C                   L  +++ +C  +T R +  +    P L   S
Subjt:  LRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCS

Query:  GRHSLIMS--GCLNLMSVHC
          H  +++  G L+L +  C
Subjt:  GRHSLIMS--GCLNLMSVHC

O49286 F-box protein SKP2B5.0e-11256.72Show/hide
Query:  MVGQGNLRTEALNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPK
        MV +G  R E LNLCFE + M            G++I+ WKDIP+ELL++I++LVDDRTVI+AS +C GWRDA+  GL  +SLSWCKKNMN+LVLSL PK
Subjt:  MVGQGNLRTEALNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPK

Query:  FAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTAL
        F KLQTL+LRQD+PQL D+AVE IA++CH+LQ                                                             A SD  L
Subjt:  FAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTAL

Query:  QAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAK
        QAIG+ CN LQ +NLGWCE +SD GVMSLAYGCPDLR+LDLC CVLITD+SV+ALAN C HLRSLGLYYC+NITDRAMYSLA S +KNK   W    K K
Subjt:  QAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAK

Query:  NDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
         D++GLR+LNISQCT LTP AVQAVCD+FP LHTCSGRHSL+MSGCLNL SVHCAC + AHR      H AH
Subjt:  NDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

Q58DG6 F-box/LRR-repeat protein 201.2e-1527.8Show/hide
Query:  CFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQA--------TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVM
        C GL  + L  C +  +  +  +     +L TL L Q   Q+ D+ + TI   CH LQ+         +D  L A+GQ C  L+ + +  C +++DVG  
Subjt:  CFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQA--------TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVM

Query:  SLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAV--C
        +LA  C +L  +DL  CV ITD ++I L+  CP L+ L L +C+ ITD  +  L +    +              D L  + +  C  +T  +++ +  C
Subjt:  SLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAV--C

Query:  DSFP--GLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPI
         S     L+ C     +  +G   L +      VHA+ AP+
Subjt:  DSFP--GLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPI

Q96IG2 F-box/LRR-repeat protein 201.2e-1527.8Show/hide
Query:  CFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQA--------TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVM
        C GL  + L  C +  +  +  +     +L TL L Q   Q+ D+ + TI   CH LQ+         +D  L A+GQ C  L+ + +  C +++DVG  
Subjt:  CFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQDRPQLADDAVETIASYCHDLQA--------TSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVM

Query:  SLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAV--C
        +LA  C +L  +DL  CV ITD ++I L+  CP L+ L L +C+ ITD  +  L +    +              D L  + +  C  +T  +++ +  C
Subjt:  SLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAV--C

Query:  DSFP--GLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPI
         S     L+ C     +  +G   L +      VHA+ AP+
Subjt:  DSFP--GLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPI

Q9LPL4 F-box protein SKP2A3.3e-11157.89Show/hide
Query:  LNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQ
        L+ CF+K+ M            G+ I  WKDIP+ELL++I+SLVDDR VIVASGVC GWRDAI FGL  + LSWC  NMN+LVLSLVPKF KLQTL LRQ
Subjt:  LNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQ

Query:  DRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTALQAIGQYCNHLQ
        D+PQL D+AVE IA++CH+LQ                                                             A +D AL+AIG  CN +Q
Subjt:  DRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTALQAIGQYCNHLQ

Query:  FVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAKNDDDGLRTLNI
         +NLGWCE +SD GVMSLAYGCPDLR+LDLCGCVLITD+SV+ALA+ C HLRSLGLYYC+NITDRAMYSLA S +KNKP  W    K K D++GLR+LNI
Subjt:  FVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAKNDDDGLRTLNI

Query:  SQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
        SQCTALTP AVQAVCDSFP LHTCSGRHSL+MSGCLNL +VHCAC + AHRA  A+ H AH
Subjt:  SQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

Arabidopsis top hitse value%identityAlignment
AT1G21410.1 F-box/RNI-like superfamily protein2.3e-11257.89Show/hide
Query:  LNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQ
        L+ CF+K+ M            G+ I  WKDIP+ELL++I+SLVDDR VIVASGVC GWRDAI FGL  + LSWC  NMN+LVLSLVPKF KLQTL LRQ
Subjt:  LNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILRQ

Query:  DRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTALQAIGQYCNHLQ
        D+PQL D+AVE IA++CH+LQ                                                             A +D AL+AIG  CN +Q
Subjt:  DRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTALQAIGQYCNHLQ

Query:  FVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAKNDDDGLRTLNI
         +NLGWCE +SD GVMSLAYGCPDLR+LDLCGCVLITD+SV+ALA+ C HLRSLGLYYC+NITDRAMYSLA S +KNKP  W    K K D++GLR+LNI
Subjt:  FVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAKNDDDGLRTLNI

Query:  SQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
        SQCTALTP AVQAVCDSFP LHTCSGRHSL+MSGCLNL +VHCAC + AHRA  A+ H AH
Subjt:  SQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

AT1G77000.1 RNI-like superfamily protein3.6e-11356.72Show/hide
Query:  MVGQGNLRTEALNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPK
        MV +G  R E LNLCFE + M            G++I+ WKDIP+ELL++I++LVDDRTVI+AS +C GWRDA+  GL  +SLSWCKKNMN+LVLSL PK
Subjt:  MVGQGNLRTEALNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPK

Query:  FAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTAL
        F KLQTL+LRQD+PQL D+AVE IA++CH+LQ                                                             A SD  L
Subjt:  FAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTAL

Query:  QAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAK
        QAIG+ CN LQ +NLGWCE +SD GVMSLAYGCPDLR+LDLC CVLITD+SV+ALAN C HLRSLGLYYC+NITDRAMYSLA S +KNK   W    K K
Subjt:  QAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAK

Query:  NDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
         D++GLR+LNISQCT LTP AVQAVCD+FP LHTCSGRHSL+MSGCLNL SVHCAC + AHR      H AH
Subjt:  NDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

AT1G77000.2 RNI-like superfamily protein3.6e-11356.72Show/hide
Query:  MVGQGNLRTEALNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPK
        MV +G  R E LNLCFE + M            G++I+ WKDIP+ELL++I++LVDDRTVI+AS +C GWRDA+  GL  +SLSWCKKNMN+LVLSL PK
Subjt:  MVGQGNLRTEALNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPK

Query:  FAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTAL
        F KLQTL+LRQD+PQL D+AVE IA++CH+LQ                                                             A SD  L
Subjt:  FAKLQTLILRQDRPQLADDAVETIASYCHDLQ-------------------------------------------------------------ATSDTAL

Query:  QAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAK
        QAIG+ CN LQ +NLGWCE +SD GVMSLAYGCPDLR+LDLC CVLITD+SV+ALAN C HLRSLGLYYC+NITDRAMYSLA S +KNK   W    K K
Subjt:  QAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GPGKAK

Query:  NDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH
         D++GLR+LNISQCT LTP AVQAVCD+FP LHTCSGRHSL+MSGCLNL SVHCAC + AHR      H AH
Subjt:  NDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH

AT3G58530.1 RNI-like superfamily protein3.2e-1325.51Show/hide
Query:  QLADDAVETIASYCHDLQATS--------DTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGL
        +++D+ +E I S C  L+  S        D  ++ + + C H+  +NL  C+ ++D  +  +A   PDL SL++  CV ITDD ++ +   C  L++L L
Subjt:  QLADDAVETIASYCHDLQATS--------DTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGL

Query:  YYCQNITDRAMYSLA--------HSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSL-IMSGCLNLMSVHCA
        Y     TD+A   ++          C     +  G G     +  L +LN++ C  +T   V  + +S   L   S    + +   CL  +S  C+
Subjt:  YYCQNITDRAMYSLA--------HSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSL-IMSGCLNLMSVHCA

AT5G23340.1 RNI-like superfamily protein2.1e-2033.14Show/hide
Query:  HDLQATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIK--
        H+ +  +DT L +IG+  + LQF+++ +C K+SD G+ ++A GC DLR+L L GC  ITD+S+ +L+  C  L +LGL  C NITD  +  L   C K  
Subjt:  HDLQATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIK--

Query:  ----NKPTKWG----PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNL
            NK +  G       AK     L+TL +  C  +   ++ ++         C    +LI+ GC ++
Subjt:  ----NKPTKWG----PGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGTCAAGGAAATTTGAGGACGGAGGCCTTGAACTTGTGCTTTGAGAAACTAATGATGCTTGAGTTTGGTGGTAAAGGAGTTAAAATGGATGCTGGGTTGATGAT
AGCAGGATGGAAGGACATTCCTATGGAGCTGCTCTTGCAAATTGTATCTCTTGTTGATGATCGAACGGTTATCGTGGCTTCGGGCGTGTGTCGTGGATGGAGGGATGCTA
TTTGCTTTGGCCTCGCCCATGTTTCTCTCTCATGGTGCAAAAAGAACATGAACAACTTGGTCCTTTCCCTAGTTCCTAAATTTGCAAAACTGCAAACTCTAATCTTGCGC
CAGGATCGACCTCAGCTTGCAGATGATGCTGTTGAGACCATTGCTAGTTACTGCCATGATCTGCAGGCTACGTCCGACACCGCATTGCAGGCTATTGGACAATATTGTAA
TCACTTACAGTTTGTAAATCTTGGATGGTGTGAAAAAGTGAGTGATGTGGGTGTGATGAGTTTGGCATATGGATGTCCTGATCTTCGAAGCCTAGATTTGTGTGGCTGCG
TCCTGATTACAGATGATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTCGGCCTCTACTATTGTCAGAACATAACAGATAGAGCAATGTACTCTTTG
GCACATAGCTGTATCAAGAACAAGCCAACAAAATGGGGACCAGGGAAAGCCAAAAACGACGACGATGGACTTCGAACGCTTAACATCAGTCAATGCACAGCTCTTACTCC
CCGTGCCGTCCAAGCAGTTTGTGATTCGTTTCCTGGTCTTCACACCTGCTCAGGTCGCCATTCTCTCATCATGAGTGGCTGTCTAAATCTGATGTCTGTGCATTGTGCTT
GTGCAGTCCATGCTCACCGTGCTCCCATTGCTCTTCTTCATTCGGCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGTCAAGGAAATTTGAGGACGGAGGCCTTGAACTTGTGCTTTGAGAAACTAATGATGCTTGAGTTTGGTGGTAAAGGAGTTAAAATGGATGCTGGGTTGATGAT
AGCAGGATGGAAGGACATTCCTATGGAGCTGCTCTTGCAAATTGTATCTCTTGTTGATGATCGAACGGTTATCGTGGCTTCGGGCGTGTGTCGTGGATGGAGGGATGCTA
TTTGCTTTGGCCTCGCCCATGTTTCTCTCTCATGGTGCAAAAAGAACATGAACAACTTGGTCCTTTCCCTAGTTCCTAAATTTGCAAAACTGCAAACTCTAATCTTGCGC
CAGGATCGACCTCAGCTTGCAGATGATGCTGTTGAGACCATTGCTAGTTACTGCCATGATCTGCAGGCTACGTCCGACACCGCATTGCAGGCTATTGGACAATATTGTAA
TCACTTACAGTTTGTAAATCTTGGATGGTGTGAAAAAGTGAGTGATGTGGGTGTGATGAGTTTGGCATATGGATGTCCTGATCTTCGAAGCCTAGATTTGTGTGGCTGCG
TCCTGATTACAGATGATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTCGGCCTCTACTATTGTCAGAACATAACAGATAGAGCAATGTACTCTTTG
GCACATAGCTGTATCAAGAACAAGCCAACAAAATGGGGACCAGGGAAAGCCAAAAACGACGACGATGGACTTCGAACGCTTAACATCAGTCAATGCACAGCTCTTACTCC
CCGTGCCGTCCAAGCAGTTTGTGATTCGTTTCCTGGTCTTCACACCTGCTCAGGTCGCCATTCTCTCATCATGAGTGGCTGTCTAAATCTGATGTCTGTGCATTGTGCTT
GTGCAGTCCATGCTCACCGTGCTCCCATTGCTCTTCTTCATTCGGCTCATTGA
Protein sequenceShow/hide protein sequence
MVGQGNLRTEALNLCFEKLMMLEFGGKGVKMDAGLMIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLAHVSLSWCKKNMNNLVLSLVPKFAKLQTLILR
QDRPQLADDAVETIASYCHDLQATSDTALQAIGQYCNHLQFVNLGWCEKVSDVGVMSLAYGCPDLRSLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSL
AHSCIKNKPTKWGPGKAKNDDDGLRTLNISQCTALTPRAVQAVCDSFPGLHTCSGRHSLIMSGCLNLMSVHCACAVHAHRAPIALLHSAH