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Sed0017556 (gene) of Chayote v1 genome

Gene IDSed0017556
OrganismSechium edule (Chayote v1)
DescriptionPrefoldin
Genome locationLG04:35350232..35353518
RNA-Seq ExpressionSed0017556
SyntenySed0017556
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593773.1 hypothetical protein SDJN03_13249, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2984.34Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN
        M TGGGFGTAAA PSRT+EEQKLEITKE+RSHEV+IAELNHLSS+RAV+QKNGN+FFRT +QKATT+EQKKLD ARAKL+KLN
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN

KAG7026105.1 Mechanosensitive ion channel protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2883.13Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN
        M TGGGFGTAAA PS T+EEQKLEITKE+RSHEV+IAELNHLSS+RAV+QKNGN+FFRT +QKATT+EQKKLD ARAKL+KLN
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN

XP_022964526.1 uncharacterized protein LOC111464527 [Cucurbita moschata]2.4e-2984.34Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN
        M TGGGFGTAAA PSRT+EEQKLEITKE+RSHEV+IAELNHLSS+RAV+QKNGN+FFRT +QKATT+EQKKLD ARAKL+KLN
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN

XP_023000435.1 uncharacterized protein LOC111494702 [Cucurbita maxima]6.9e-2982.14Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS
        M TGGGFGTA+  PSRT+EEQKLEITKE+RSHEV+IAELNHLSS+RAV+QKNGN+FFRT +QKATT+EQKKLD ARAKL+KLNS
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS

XP_023514719.1 uncharacterized protein LOC111778937 [Cucurbita pepo subsp. pepo]4.1e-2983.33Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS
        M TGGGFGTAA  PSRT+EEQKLEITKE+RSHEV+IAELNHLSS+RAV+QKNGN+FFRT +QKATT+EQKKLD ARAKL+KLNS
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS

TrEMBL top hitse value%identityAlignment
A0A0A0LK18 Uncharacterized protein2.5e-2479.76Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS
        M   GG  T AASPS TMEEQKLEITK++RS EVAIAELNHLSS+RAV+QKNGNLFFRT +QKATT+EQKKLD ARAKLE LNS
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS

A0A1S3C672 uncharacterized protein LOC1034969171.2e-2377.38Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS
        M   GGF T AA PS T EEQKLEITK++RS EVAIAELNHLSS+RAVYQKNGNLFFRT +QKATT+EQKKLD A+A+LE+LNS
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS

A0A6J1DN63 uncharacterized protein LOC1110227694.5e-2681.4Show/hide
Query:  MDTGGGFGT--AAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS
        M  GGGF T  A ASPSRT+EEQKLEI K +RSHEVAIAELNHLSS RAV+QKNGNLFFRT +QKATT+EQKKLD ARAKLEKLNS
Subjt:  MDTGGGFGT--AAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS

A0A6J1HJ49 uncharacterized protein LOC1114645271.2e-2984.34Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN
        M TGGGFGTAAA PSRT+EEQKLEITKE+RSHEV+IAELNHLSS+RAV+QKNGN+FFRT +QKATT+EQKKLD ARAKL+KLN
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLN

A0A6J1KIB7 uncharacterized protein LOC1114947023.3e-2982.14Show/hide
Query:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS
        M TGGGFGTA+  PSRT+EEQKLEITKE+RSHEV+IAELNHLSS+RAV+QKNGN+FFRT +QKATT+EQKKLD ARAKL+KLNS
Subjt:  MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49245.1 Prefoldin chaperone subunit family protein4.8e-1248.53Show/hide
Query:  TMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS
        T  +++ E+ KEI+  EV++ EL+ LSSSR++YQKNGNLFF T  +KA  + QK+LD A++++ K+ S
Subjt:  TMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACCGGCGGCGGGTTTGGCACGGCGGCGGCGTCTCCGTCGAGAACGATGGAAGAGCAGAAACTGGAAATTACAAAAGAGATTCGAAGTCATGAGGTCGCCATTGC
AGAGCTCAATCATCTTTCCTCTTCCAGAGCTGTCTATCAGAAAAATGGAAACTTGTTTTTCCGCACACCTATTCAAAAGGCAACAACCGCGGAACAGAAAAAACTTGATA
CGGCAAGAGCAAAGCTTGAGAAACTGAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
CTAAACAAAGCAATCGAATCGAGAGTGAGAGATCAGTCGGAGAATGGATACCGGCGGCGGGTTTGGCACGGCGGCGGCGTCTCCGTCGAGAACGATGGAAGAGCAGAAAC
TGGAAATTACAAAAGAGATTCGAAGTCATGAGGTCGCCATTGCAGAGCTCAATCATCTTTCCTCTTCCAGAGCTGTCTATCAGAAAAATGGAAACTTGTTTTTCCGCACA
CCTATTCAAAAGGCAACAACCGCGGAACAGAAAAAACTTGATACGGCAAGAGCAAAGCTTGAGAAACTGAATTCTTGATATGGGTGGAGTTCAAACTCACATGGGAGCAG
ATCATATAAATTTATCTCAATATTCAAAGGAAATTCAGGAGCCAAGCTTTGATTTATAGGTTGAAAAATCTGCATACAAAATTTATTTGCTCAAATCTAATCCAACAACT
TGAAAAGCTTGTGTTTTGTTCAGAATATGAATCAAAAGTAGCATATTGTTCTGAACATCTTTGATCAGACAGTCATGCCTCAATGTAAGTTTGAGTTGTTATGATAGAAA
TTTTAAAATGTTAGTCTAATCTTTAGGGCAGA
Protein sequenceShow/hide protein sequence
MDTGGGFGTAAASPSRTMEEQKLEITKEIRSHEVAIAELNHLSSSRAVYQKNGNLFFRTPIQKATTAEQKKLDTARAKLEKLNS