; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017561 (gene) of Chayote v1 genome

Gene IDSed0017561
OrganismSechium edule (Chayote v1)
DescriptionUPF0047 protein YjbQ
Genome locationLG13:17702808..17721492
RNA-Seq ExpressionSed0017561
SyntenySed0017561
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001602 - Uncharacterised protein family UPF0047
IPR035917 - YjbQ-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591177.1 hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia]5.6e-7181.88Show/hide
Query:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS
        G VL A++P+RV+        +G PS  AG+GNPS MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIG+DLSEFKCGLAH FLQHTSASLTINENYDS
Subjt:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS

Query:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        DVRSDTETFLN IV EGT+APW HTLEGPDDMPAHIKSSMFGCALT+PITNGKFN+GTWQ
Subjt:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

XP_008453044.1 PREDICTED: UPF0047 protein YjbQ [Cucumis melo]1.1e-6980.62Show/hide
Query:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS
        G ++ A++P+RV+        +G PS  AGS NPS MAAAGPKWAQKTVTL PHR+GCHLITPKIMKEIGQDLSEFKCGLAH FLQHTSASLTINENYDS
Subjt:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS

Query:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        DV+SDTETFLNKIV EGT+APW HTLEGPDDMPAHIKSS+FGCALTIPITNGKFN+GTWQ
Subjt:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

XP_022936473.1 uncharacterized protein LOC111443082 [Cucurbita moschata]5.6e-7181.88Show/hide
Query:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS
        G VL A++P+RV+        +G PS  AG+GNPS MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIG+DLSEFKCGLAH FLQHTSASLTINENYDS
Subjt:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS

Query:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        DVRSDTETFLN IV EGT+APW HTLEGPDDMPAHIKSSMFGCALT+PITNGKFN+GTWQ
Subjt:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

XP_022976235.1 uncharacterized protein LOC111476694 [Cucurbita maxima]7.3e-7181.88Show/hide
Query:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS
        G VL A++P+RV+        +G PS  AG+GNPS MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIG DLSEFKCGLAH FLQHTSASLTINENYDS
Subjt:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS

Query:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        DVRSDTETFLN IV EGT+APW HTLEGPDDMPAHIKSSMFGCALT+PITNGKFN+GTWQ
Subjt:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

XP_038897717.1 UPF0047 protein C4A8.02c [Benincasa hispida]3.6e-7076.5Show/hide
Query:  MSGKRISFVWGGLWVATYIMQVGGVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFK
        MSGK     + GLWV   IMQ  G +L A++P+R++        +G  S  A SGN S MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIG DLSEFK
Subjt:  MSGKRISFVWGGLWVATYIMQVGGVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFK

Query:  CGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        CGLAH FLQHTSASLTINENYDSDVRSDTETFLNKIV EGT+APW HTLEGPDDMPAHIKSSMFGCALTIPITNGKFN+GTWQ
Subjt:  CGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

TrEMBL top hitse value%identityAlignment
A0A1S3BUP9 UPF0047 protein YjbQ5.1e-7080.62Show/hide
Query:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS
        G ++ A++P+RV+        +G PS  AGS NPS MAAAGPKWAQKTVTL PHR+GCHLITPKIMKEIGQDLSEFKCGLAH FLQHTSASLTINENYDS
Subjt:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS

Query:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        DV+SDTETFLNKIV EGT+APW HTLEGPDDMPAHIKSS+FGCALTIPITNGKFN+GTWQ
Subjt:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

A0A6J1DDZ9 uncharacterized protein LOC111019630 isoform X11.1e-6981.1Show/hide
Query:  GVVLFA--SKPVRVRF-------QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINE
        G VL A  ++PVRV+          SG PS  AGSG PS MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIGQDL+EFKCGLAH FLQHTSASLTINE
Subjt:  GVVLFA--SKPVRVRF-------QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINE

Query:  NYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        NYDSDVRSDTETFLN+IV EGT+APW HTLEGPDDMPAHIKSSMFGCALTIPITNG FN+GTWQ
Subjt:  NYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

A0A6J1DE78 uncharacterized protein LOC111019630 isoform X28.7e-7080.61Show/hide
Query:  GVVLFA--SKPVRVRF-------QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINE
        G VL A  ++PVRV+          SG PS  AGSG PS MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIGQDL+EFKCGLAH FLQHTSASLTINE
Subjt:  GVVLFA--SKPVRVRF-------QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINE

Query:  NYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQL
        NYDSDVRSDTETFLN+IV EGT+APW HTLEGPDDMPAHIKSSMFGCALTIPITNG FN+GTWQ+
Subjt:  NYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQL

A0A6J1FDC5 uncharacterized protein LOC1114430822.7e-7181.88Show/hide
Query:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS
        G VL A++P+RV+        +G PS  AG+GNPS MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIG+DLSEFKCGLAH FLQHTSASLTINENYDS
Subjt:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS

Query:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        DVRSDTETFLN IV EGT+APW HTLEGPDDMPAHIKSSMFGCALT+PITNGKFN+GTWQ
Subjt:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

A0A6J1IIX0 uncharacterized protein LOC1114766943.6e-7181.88Show/hide
Query:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS
        G VL A++P+RV+        +G PS  AG+GNPS MAAAGPKWAQKTVTLPPHR+GCHLITPKIMKEIG DLSEFKCGLAH FLQHTSASLTINENYDS
Subjt:  GVVLFASKPVRVRF-----QCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDS

Query:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        DVRSDTETFLN IV EGT+APW HTLEGPDDMPAHIKSSMFGCALT+PITNGKFN+GTWQ
Subjt:  DVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ

SwissProt top hitse value%identityAlignment
O14155 UPF0047 protein C4A8.02c8.0e-2851.3Show/hide
Query:  QKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCAL
        Q+ +TL    +G ++IT  ++K++  +L  F  G  +FF+QHTSA+LTINEN+D+D R+D    L+KIV E  +A + HT EG DDMPAH+KSS+ G +L
Subjt:  QKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCAL

Query:  TIPITNGKFNVGTWQ
        T+PITNGK ++GTWQ
Subjt:  TIPITNGKFNVGTWQ

P0A2L1 UPF0047 protein YjbQ1.3e-2246.15Show/hide
Query:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC
        W Q+T+TL    +G HLIT +I  ++   L   + GL H  L HTSASLT+NEN D  VR+D E    K V +   A + H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNVGTWQ
        +L +P+  G+  +GTWQ
Subjt:  ALTIPITNGKFNVGTWQ

P0A2L2 UPF0047 protein YjbQ1.3e-2246.15Show/hide
Query:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC
        W Q+T+TL    +G HLIT +I  ++   L   + GL H  L HTSASLT+NEN D  VR+D E    K V +   A + H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNVGTWQ
        +L +P+  G+  +GTWQ
Subjt:  ALTIPITNGKFNVGTWQ

P0AF48 UPF0047 protein YjbQ1.1e-2447.01Show/hide
Query:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC
        W QKT+TL    +G HL+T +I+ ++  D+     GL H  LQHTSASLT+NEN D  VR D E F  + V +     + H  EG DDMP+HIKSSM G 
Subjt:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNVGTWQ
        +L +P+  G+   GTWQ
Subjt:  ALTIPITNGKFNVGTWQ

P0AF49 UPF0047 protein YjbQ1.1e-2447.01Show/hide
Query:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC
        W QKT+TL    +G HL+T +I+ ++  D+     GL H  LQHTSASLT+NEN D  VR D E F  + V +     + H  EG DDMP+HIKSSM G 
Subjt:  WAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNVGTWQ
        +L +P+  G+   GTWQ
Subjt:  ALTIPITNGKFNVGTWQ

Arabidopsis top hitse value%identityAlignment
AT1G21065.1 unknown protein4.9e-5761.45Show/hide
Query:  VWGGLWVATYIMQVGGVVLFASKPVRVRFQCSGKPSVRAGS----GNP-----SSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLA
        V GG+ +A  ++ +G  +    K +   F  SG   +R  S     NP     S  +++G KWAQKT+TLPP R+GCHLITPKI+KEI +DLS+F CGLA
Subjt:  VWGGLWVATYIMQVGGVVLFASKPVRVRFQCSGKPSVRAGS----GNP-----SSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLA

Query:  HFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ
        H FLQHTSASLTINENYD DV++DTETFLN+IV EG +APW HT+EGPDDMPAHIKSSMFGC LTIPIT GK ++GTWQ
Subjt:  HFFLQHTSASLTINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGTAAGCGTATTAGCTTTGTGTGGGGTGGGCTTTGGGTTGCAACATACATAATGCAAGTAGGAGGTGTTGTTCTATTTGCTTCAAAACCAGTCCGCGTAAGGTT
CCAGTGTAGCGGTAAACCGTCCGTCAGAGCAGGCTCAGGCAATCCAAGCTCGATGGCGGCCGCCGGTCCTAAGTGGGCTCAAAAGACTGTTACGCTGCCTCCGCATAGGC
AGGGCTGTCATCTCATCACCCCCAAGATAATGAAGGAAATTGGGCAAGATTTGTCAGAATTCAAATGTGGCCTTGCTCATTTCTTCCTGCAGCATACGAGTGCCTCTCTC
ACCATCAATGAAAACTATGATTCCGATGTTCGTAGTGATACTGAAACCTTCCTCAACAAGATAGTGTCTGAAGGGACAACTGCTCCTTGGAACCATACACTTGAAGGCCC
GGATGACATGCCAGCACACATTAAATCATCCATGTTTGGCTGTGCACTCACGATTCCAATTACAAATGGGAAGTTTAATGTGGGTACTTGGCAGTTGAATTATTGGCGTT
TAGGCATTTTGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGTAAGCGTATTAGCTTTGTGTGGGGTGGGCTTTGGGTTGCAACATACATAATGCAAGTAGGAGGTGTTGTTCTATTTGCTTCAAAACCAGTCCGCGTAAGGTT
CCAGTGTAGCGGTAAACCGTCCGTCAGAGCAGGCTCAGGCAATCCAAGCTCGATGGCGGCCGCCGGTCCTAAGTGGGCTCAAAAGACTGTTACGCTGCCTCCGCATAGGC
AGGGCTGTCATCTCATCACCCCCAAGATAATGAAGGAAATTGGGCAAGATTTGTCAGAATTCAAATGTGGCCTTGCTCATTTCTTCCTGCAGCATACGAGTGCCTCTCTC
ACCATCAATGAAAACTATGATTCCGATGTTCGTAGTGATACTGAAACCTTCCTCAACAAGATAGTGTCTGAAGGGACAACTGCTCCTTGGAACCATACACTTGAAGGCCC
GGATGACATGCCAGCACACATTAAATCATCCATGTTTGGCTGTGCACTCACGATTCCAATTACAAATGGGAAGTTTAATGTGGGTACTTGGCAGTTGAATTATTGGCGTT
TAGGCATTTTGGATTGA
Protein sequenceShow/hide protein sequence
MSGKRISFVWGGLWVATYIMQVGGVVLFASKPVRVRFQCSGKPSVRAGSGNPSSMAAAGPKWAQKTVTLPPHRQGCHLITPKIMKEIGQDLSEFKCGLAHFFLQHTSASL
TINENYDSDVRSDTETFLNKIVSEGTTAPWNHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNVGTWQLNYWRLGILD