CuGenDBv2

Gene ID	Sed0017571
Organism	Sechium edule (Chayote v1)
Description	Squalene synthase
Genome location	LG01:2038096..2045186
RNA-Seq Expression	Sed0017571
Synteny	Sed0017571
Gene Ontology terms	GO:0008610 - lipid biosynthetic process (biological process) GO:0045338 - farnesyl diphosphate metabolic process (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004310 - farnesyl-diphosphate farnesyltransferase activity (molecular function) GO:0051996 - squalene synthase activity (molecular function)
InterPro domains	IPR002060 - Squalene/phytoene synthase IPR006449 - Squalene synthase-like IPR008949 - Isoprenoid synthase domain superfamily IPR019845 - Squalene/phytoene synthase, conserved site IPR033904 - Trans-isoprenyl diphosphate synthases, head-to-head IPR044844 - Trans-isoprenyl diphosphate synthases, eukaryotic-type

Homology

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GenBank top hits

e value

%identity

Alignment

ARE29880.1 squalene synthase [Trichosanthes pubera subsp. rubriflos]

1.0e-226

93.29

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Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGS GAILRHPDD YPLLKLKMAAR+AEKQIP +PHWGFCY+MLHKVSRSFALVIQQL P+LRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KYADKLEDFK +ENSVKAVQCLND V NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNVEVFRGVVKMRRGLTAKIID TKTIADVYG+FFDFSVMLKAKVN++DPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRS PMYNPA IV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAK+L ANQPI
Subjt:  IILAYLSAKRLTANQPI

ARE29881.1 squalene synthase [Trichosanthes truncata]

1.1e-228

94.24

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAILRHPDD YPLLKLKMAAR  EKQIPP+PHWGFCYTMLHKVSRSFALVIQQL+PELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        I++RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KY DKLEDFK +ENS KAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNVEVFRGVVKMRRGLTAKIID TKTIADVYGAFFDFSVMLKAKVN SDPNAAKTLSRIEAIQKTCKESGLLNKR LYVVRS PMYNPAVIV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAKRL ANQPI
Subjt:  IILAYLSAKRLTANQPI

ARE29883.1 squalene synthase [Trichosanthes kirilowii]

5.5e-228

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Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAILRHPDD YPLLKLKMAAR+AEKQIP +PHWGFCY+MLHKVSRSFALVIQQL PELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KYADKLEDFK +ENSVKAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNVEVFRGVVKMRRGLTAKIID TKTIADVYG+FFDFSVMLKAKVN++ PNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRS PMYNPAVIV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAK+L ANQPI
Subjt:  IILAYLSAKRLTANQPI

ARE29890.1 squalene synthase [Luffa acutangula]

3.8e-229

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Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAILRHPDD YPLLKLKMAAR+AEKQIPP+PHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPIL AFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KYADKLEDFK ++NSVKAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNV+VFRGVVKMRRGLTAK+ID TKT+ADVYGAFFDFSVMLKAKVNNSDPNA+KTLSRIEAIQKTCK+SGLLNKRKLYVV S PMYNPAVIV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAKRL ANQPI
Subjt:  IILAYLSAKRLTANQPI

XP_038902127.1 squalene synthase 12-like [Benincasa hispida]

6.1e-227

92.33

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Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAIL+HPDD YPLLKLKMAAR+AEKQIPP+PHWGFCYTMLH+VSRSFALVIQQL+PELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHA+KLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W KYADKLEDFK +ENSVKAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNN+EVFRGVVKMRRGLTAK+ID TKT+ADVYGAFFDFSVMLKAKVN+SDPNA+KTLSRIEAIQ+TCK+SGLLNKRKLYVVRS PMYNPAVIV+LFSL+C
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAK+L ANQ +
Subjt:  IILAYLSAKRLTANQPI

TrEMBL top hits

e value

%identity

Alignment

A0A2R2WEV3 Squalene synthase

5.0e-227

93.29

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGS GAILRHPDD YPLLKLKMAAR+AEKQIP +PHWGFCY+MLHKVSRSFALVIQQL P+LRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KYADKLEDFK +ENSVKAVQCLND V NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNVEVFRGVVKMRRGLTAKIID TKTIADVYG+FFDFSVMLKAKVN++DPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRS PMYNPA IV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAK+L ANQPI
Subjt:  IILAYLSAKRLTANQPI

A0A2R2WEV4 Squalene synthase

2.7e-228

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Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAILRHPDD YPLLKLKMAAR+AEKQIP +PHWGFCY+MLHKVSRSFALVIQQL PELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KYADKLEDFK +ENSVKAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNVEVFRGVVKMRRGLTAKIID TKTIADVYG+FFDFSVMLKAKVN++ PNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRS PMYNPAVIV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAK+L ANQPI
Subjt:  IILAYLSAKRLTANQPI

A0A2R2WEW0 Squalene synthase

1.1e-226

92.09

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAIL+HPDD YPLLKLK+AAR+AEKQIPP+PHWGFCYTMLHKVSRSFALVIQQL+PELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHA++LEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W KYADKLEDFK +ENSVKAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNVEVFRGVVKMRRGLTAK+ID TKT+ADVYGAFFDFSVMLKAKVN++DPNA+KTLSRIEAIQKTCK+SG+LN+RKLYVVRS PM+NPAVIV+LFSL+C
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAKRL ANQ +
Subjt:  IILAYLSAKRLTANQPI

A0A2R2WEW6 Squalene synthase

1.9e-229

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Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAILRHPDD YPLLKLKMAAR+AEKQIPP+PHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPIL AFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY+RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KYADKLEDFK ++NSVKAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNV+VFRGVVKMRRGLTAK+ID TKT+ADVYGAFFDFSVMLKAKVNNSDPNA+KTLSRIEAIQKTCK+SGLLNKRKLYVV S PMYNPAVIV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAKRL ANQPI
Subjt:  IILAYLSAKRLTANQPI

A0A2R2WEZ7 Squalene synthase

5.4e-229

94.24

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Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAILRHPDD YPLLKLKMAAR  EKQIPP+PHWGFCYTMLHKVSRSFALVIQQL+PELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        I++RDWHFSCGTK YKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W+KY DKLEDFK +ENS KAVQCLNDLV NALNH EDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        YNNVEVFRGVVKMRRGLTAKIID TKTIADVYGAFFDFSVMLKAKVN SDPNAAKTLSRIEAIQKTCKESGLLNKR LYVVRS PMYNPAVIV+LFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQPI
        IILAYLSAKRL ANQPI
Subjt:  IILAYLSAKRLTANQPI

SwissProt top hits

e value

%identity

Alignment

A0A1P7Y0A8 Squalene synthase 12

2.6e-196

78.55

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAIL+HPDD YPLLKLK+AAR+AEKQIP +PHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++KVPI+ AFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY  DWHFSCGTK YKVLMDEFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGLSKLFHAS  EDLA DSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR++W+KY DKLED K +ENS KAVQCLND+V +AL HAEDCL YMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        +NN +VFRGVVKMRRGLTAK+ID TKT++DVYGAFFDFS +LK+KV+N+DPNA KTLSR+EAIQKTCKESG L+KRK Y++ S   +N A+I ++F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQ
        I+ AYLS+  L   Q
Subjt:  IILAYLSAKRLTANQ

A0A1P7Y0D0 Squalene synthase 13

2.6e-196

78.55

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAIL+HPDD YPLLKLK+AAR+AEKQIP +PHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++KVPI+ AFHCH
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY  DWHFSCGTK YKVLMDEFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGLSKLFHAS  EDLA DSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR++W+KY DKLED K +ENS KAVQCLND+V +AL HAEDCL YMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        +NN +VFRGVVKMRRGLTAK+ID TKT++DVYGAFFDFS +LK+KV+N+DPNA KTLSR+EAIQKTCKESG L+KRK Y++ S   +N A+I ++F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQ
        I+ AYLS+  L   Q
Subjt:  IILAYLSAKRLTANQ

D0VFU8 Squalene synthase

4.9e-195

78.78

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MG+L AIL++PDD+YPL+KLK+AAR+AEKQIPP+PHWGFCY ML KVSRSFALVIQQL  ELR+AVCIFYLVLRALDTVEDDTSI TD+KVPIL +FH H
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        +Y R+WHF+CGTK YKVLMD+FHHVSTAFLELGK YQ+AIEDIT RMGAGMAKFIC+EVET DDYDEYCHYVAGLVGLGLSKLFHAS  EDLA DSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINE+PK RMFWPRE+W+KY +KLED K +ENSVKAVQCLND+V NAL+H EDCL YM NL D +IFRFCAIPQ+MAIGTLA+C
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        Y+N+EVFRGVVKMRRGLTAK+ID TKT+ADVYGAFFDFS MLK+KVNN+DPNA KTL R++AI KTC++SG LNKRK Y++R+ P Y+P +IVV+F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKR
        IILA L   R
Subjt:  IILAYLSAKR

O48666 Squalene synthase 1

1.2e-196

79.04

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLGAIL+HP+D YPLLKLK AAR+AEKQIPP+PHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++KVPIL AFH H
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        IY +DWHFSCGTK YKVLMDEFHHVS AFLELG GYQEAIEDIT RMGAGMAKFIC+EVET++DYDEYCHYVAGLVGLGLSKLFHAS  EDLA DSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR++W+KY DKLED K +ENS KAVQCLND+V +AL HAEDCL YMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        +NN +VFRGVVKMRRGLTAK+ID TKT++DVYGAFFDFS +LK+KV+N+DPNA KTLSR+EAIQKTCKESG L+KRK Y++ S   +N A+I ++F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKRLTANQ
        I+ AYLS+  L   Q
Subjt:  IILAYLSAKRLTANQ

P53800 Squalene synthase

6.4e-195

79.02

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSL AIL++P+D+YPL+KLK+AAR+AEKQIPP P+WGFCY+MLHKVSRSFALVIQQL  ELR+AVCIFYLVLRALDTVEDDTSI TD+KVPIL +FH H
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS
        +Y R+WHFSCGTK YKVLMD+FHHVSTAFLEL K YQ+AIEDIT RMGAGMAKFIC+EVET DDYDEYCHYVAGLVGLGLSKLFHAS+ EDLA DSLSNS
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINE+PK RMFWPRE+W+KY +KLE+ K ++NS KAVQCLND+V NAL H EDCL YMS LRD SIFRFCAIPQ+MAIGTLA+C
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC
        Y+N+EVFRGVVKMRRGLTAK+ID T+TIADVYGAFFDFS MLK+KVNN+DPNA KTL R+E I KTC++SG LNKRK Y++RS P Y+P +IVV+F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLIC

Query:  IILAYLSAKR
        IILA LS  R
Subjt:  IILAYLSAKR

Arabidopsis top hits

e value

%identity

Alignment

AT4G34640.1 squalene synthase 1

3.1e-184

76.1

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSLG +LR+PDDIYPLLK+K A   AEKQIPP+PHWGFCY+MLHKVSRSF+LVIQQL  ELRNAVC+FYLVLRALDTVEDDTSI TD KVPIL AFH H
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPD--SLS
        IY  DWH+SCGTK YK+LMD+FHHVS AFLEL KGYQEAIE+IT+RMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLF A+  E L PD  ++S
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA
        NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRE+W KYADKLED K +EN+ K+VQCLN++V NAL H EDCL YM +LRD SIFRFCAIPQIMAIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSL
        LCYNN +VFRGVVK+RRGLTAK+ID TKT+ADVYGAF+DFS MLK KV+ +DPNA+KTL+R+EA+QK C+++G+L  RK YV   G   N   I+++  L
Subjt:  LCYNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSL

Query:  ICIILAYLSA
        + I+ AYL A
Subjt:  ICIILAYLSA

AT4G34650.1 squalene synthase 2

9.9e-175

71.43

Show/hide

Query:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH
        MGSL  ILRHPD++YPLLKLK+A   A+KQIP +PH  FCY++LHKVS+SF+LVIQQL  ELRNAVC+FYL+LRALDTVEDDTS+  +IKVPIL AFH H
Subjt:  MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCH

Query:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPD--SLS
        IY  DWHFSCGTK YK+LMD+FHHVS AFL+L KGYQEAIEDITKRMGAGMAKFIC+EVET+DDYDEYCHY AGLVGLGLSK+F AS+LE L PD   +S
Subjt:  IYSRDWHFSCGTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA
        NS GLFLQKTNII+DYLEDINE PKSRMFWPRE+W KY DKLEDFK++E + KAVQCLN++V NALNH EDCL  +++LRD +IF+ CAIPQI+AIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLF-S
        LCYNNV+VFRGVV++RRGL AK+ID TKT+ DVYGAF+DFS ML+ KV+N+DPNA KTL+R+E I+K CKE+G L+KRK YV  +    + A+ VV+F  
Subjt:  LCYNNVEVFRGVVKMRRGLTAKIIDGTKTIADVYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLF-S

Query:  LICIILAYLSAKR
        L+ I++ YL A +
Subjt:  LICIILAYLSAKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAGTTTGGGGGCGATTTTGAGACACCCAGATGATATTTATCCGCTTTTGAAGCTGAAAATGGCGGCTAGAAATGCGGAGAAGCAGATCCCGCCGGACCCTCATTG
GGGATTCTGCTACACAATGCTGCATAAGGTCTCCAGAAGTTTTGCTCTCGTTATTCAGCAGCTTCAGCCCGAGCTCAGAAATGCTGTATGTATATTTTATCTTGTTCTGC
GAGCTCTCGACACTGTTGAGGATGATACAAGCATACAAACAGATATCAAAGTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAGCCGTGATTGGCACTTTTCATGT
GGCACAAAGCACTATAAAGTTCTTATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTAGAACTTGGGAAGGGGTACCAAGAAGCAATTGAGGATATTACGAAACGGAT
GGGTGCTGGAATGGCTAAGTTTATTTGCCAGGAGGTAGAGACAGTTGATGATTATGATGAATATTGCCACTACGTAGCTGGACTTGTCGGACTAGGTTTGTCTAAGTTAT
TCCATGCTTCAAAGTTGGAGGATTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACGAACATAATTCGAGATTACTTGGAGGACATCAATGAG
ATACCGAAATCTCGAATGTTTTGGCCTCGTGAGGTTTGGAACAAATATGCTGATAAATTAGAGGATTTTAAAGATAAGGAGAACTCAGTCAAGGCCGTGCAATGCCTCAA
TGATTTGGTCAATAATGCTTTGAATCATGCTGAGGATTGTCTGATATACATGTCTAACTTAAGAGATCTTTCCATATTTCGGTTTTGTGCAATTCCTCAGATTATGGCAA
TTGGAACCCTAGCATTATGCTACAACAACGTAGAAGTCTTCAGGGGGGTGGTCAAAATGCGTCGAGGTCTTACTGCAAAGATCATTGATGGAACGAAAACGATTGCGGAT
GTCTATGGAGCTTTCTTTGATTTTTCTGTTATGCTGAAGGCTAAGGTCAATAACAGTGATCCTAATGCTGCTAAAACCTTGAGCAGGATTGAGGCAATACAGAAAACATG
CAAGGAGTCGGGTCTCTTGAACAAAAGGAAGTTATATGTGGTAAGAAGTGGCCCAATGTACAATCCAGCTGTGATTGTCGTACTTTTCAGCCTAATATGCATCATTCTTG
CATATCTCTCTGCCAAACGGTTAACAGCTAACCAACCCATATGA

mRNA sequence

Show/hide mRNA sequence

GTAAAATGAACATTGGAGGGAAAATAATAGTTACTAAATAATAGCGGCCAATAAATTGTCTGCATTTTAGTACTACAAAATAATAAACAAGAGGCTGGAAACTATCATTT
GAATTTGGGTCCTCATTTTTTTTTTGTGACAGATTTGTATTTGCTTTGTAAAAACTCGTCTGTAAACCACTACCCTTCATGTCGGCTTGAACCCTTCTGTGTTTTTTTGT
TTTTTTTTTTTTTGCTGTTGTTCGAATCTGTCATCGTCGATTGAAGAAGAAGAACCCCATTTGAGGAATTAATCAGGGTGTTTGAAATGGGGAGTTTGGGGGCGATTTTG
AGACACCCAGATGATATTTATCCGCTTTTGAAGCTGAAAATGGCGGCTAGAAATGCGGAGAAGCAGATCCCGCCGGACCCTCATTGGGGATTCTGCTACACAATGCTGCA
TAAGGTCTCCAGAAGTTTTGCTCTCGTTATTCAGCAGCTTCAGCCCGAGCTCAGAAATGCTGTATGTATATTTTATCTTGTTCTGCGAGCTCTCGACACTGTTGAGGATG
ATACAAGCATACAAACAGATATCAAAGTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAGCCGTGATTGGCACTTTTCATGTGGCACAAAGCACTATAAAGTTCTT
ATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTAGAACTTGGGAAGGGGTACCAAGAAGCAATTGAGGATATTACGAAACGGATGGGTGCTGGAATGGCTAAGTTTAT
TTGCCAGGAGGTAGAGACAGTTGATGATTATGATGAATATTGCCACTACGTAGCTGGACTTGTCGGACTAGGTTTGTCTAAGTTATTCCATGCTTCAAAGTTGGAGGATT
TGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACGAACATAATTCGAGATTACTTGGAGGACATCAATGAGATACCGAAATCTCGAATGTTTTGG
CCTCGTGAGGTTTGGAACAAATATGCTGATAAATTAGAGGATTTTAAAGATAAGGAGAACTCAGTCAAGGCCGTGCAATGCCTCAATGATTTGGTCAATAATGCTTTGAA
TCATGCTGAGGATTGTCTGATATACATGTCTAACTTAAGAGATCTTTCCATATTTCGGTTTTGTGCAATTCCTCAGATTATGGCAATTGGAACCCTAGCATTATGCTACA
ACAACGTAGAAGTCTTCAGGGGGGTGGTCAAAATGCGTCGAGGTCTTACTGCAAAGATCATTGATGGAACGAAAACGATTGCGGATGTCTATGGAGCTTTCTTTGATTTT
TCTGTTATGCTGAAGGCTAAGGTCAATAACAGTGATCCTAATGCTGCTAAAACCTTGAGCAGGATTGAGGCAATACAGAAAACATGCAAGGAGTCGGGTCTCTTGAACAA
AAGGAAGTTATATGTGGTAAGAAGTGGCCCAATGTACAATCCAGCTGTGATTGTCGTACTTTTCAGCCTAATATGCATCATTCTTGCATATCTCTCTGCCAAACGGTTAA
CAGCTAACCAACCCATATGAACATCAAACTCTGGATTCAAATTTTAACAGAGCACGTTGTAAACTTGGACGATACGACTAAGTTTTTGGCTCCATTGTCTTCCTTAGAAG
CTTTGTTTGAGTGATTCCATGGCTGTAAGTTACTGTTTGTTTAGTACACACCAGGAAACAAATGAGATTGAAATTGTGAGAATGCATCCATTCTTACCTTGTATGCTTGA
CTTATTCAAATATCAGCAAAATGAATAA

Protein sequence

Show/hide protein sequence

MGSLGAILRHPDDIYPLLKLKMAARNAEKQIPPDPHWGFCYTMLHKVSRSFALVIQQLQPELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYSRDWHFSC
GTKHYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE
IPKSRMFWPREVWNKYADKLEDFKDKENSVKAVQCLNDLVNNALNHAEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALCYNNVEVFRGVVKMRRGLTAKIIDGTKTIAD
VYGAFFDFSVMLKAKVNNSDPNAAKTLSRIEAIQKTCKESGLLNKRKLYVVRSGPMYNPAVIVVLFSLICIILAYLSAKRLTANQPI

Sed0017571 (gene) of Chayote v1 genome