; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017588 (gene) of Chayote v1 genome

Gene IDSed0017588
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L26
Genome locationLG05:43256114..43257127
RNA-Seq ExpressionSed0017588
SyntenySed0017588
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]1.7e-6793.15Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQ+ RGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDR+AKGRASADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

XP_010102767.1 60S ribosomal protein L26-1 [Morus notabilis]5.9e-6893.84Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMP+RKDDEVQ+ RGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLLDR+AKGRA+ADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]1.2e-6894.52Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFTAPSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQ+ RGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDR+AKGRASADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]3.5e-6894.52Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+ RGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDR+AKGRASADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]1.3e-6793.15Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+ RGT+KGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDR+AKGRAS+DKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A6J1D6T1 60S ribosomal protein L26-1-like5.7e-6994.52Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFTAPSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQ+ RGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDR+AKGRASADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

A0A6J1EUH8 60S ribosomal protein L26-1-like1.7e-6894.52Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+ RGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDR+AKGRASADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

A0A6J1ICB8 60S ribosomal protein L26-1-like1.7e-6894.52Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+ RGT+KGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDR+AKGRASADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

A0A6J1L4P7 60S ribosomal protein L26-1-like6.4e-6893.15Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQ+ RGT+KGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDR+AKGRAS+DKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

W9RS71 60S ribosomal protein L26-12.9e-6893.84Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMP+RKDDEVQ+ RGT+KGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLLDR+AKGRA+ADKDK TKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-15.4e-6484.93Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHFTA SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQI RGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+R+AKGRA+ADK+K TKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

P61257 60S ribosomal protein L261.5e-4262.76Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQ+ RG +KG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVMITKLKLDKDRKSLLDRRAKGR-ASADKDKATKFTAEDIMQ
        PSKV+IT+LKLDKDRK +L+R+AK R    +K K  + T E + +
Subjt:  PSKVMITKLKLDKDRKSLLDRRAKGR-ASADKDKATKFTAEDIMQ

Q39411 60S ribosomal protein L261.5e-5879.31Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR++RK HFTA SS RRV MS+PLS DLR KYNVRSMPIRKDDE QI RGT+KGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSV
        +KV+ITKL+LDKDRKSLL+R+AKGRA+ADKDK TKFTA D+MQ+V
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-25.4e-6484.25Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHFTAPSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQ+ RGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+R+A GRA+ADK+K TKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

Q9UNX3 60S ribosomal protein L26-like 11.2e-4269.84Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF APS VRR +MS+PLS +LR KYNVRSMPIRKDDEVQ+ RG +KG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVMITKLKLDKDRKSLLDRRAKGR
        PSKV+IT+LKLDKDRK +L+R+AK R
Subjt:  PSKVMITKLKLDKDRKSLLDRRAKGR

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein3.8e-6584.93Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHFTA SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQI RGT+KGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+R+AKGRA+ADK+K TKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein3.8e-6584.25Show/hide
Query:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHFTAPSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQ+ RGTFKGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+R+A GRA+ADK+K TKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAACCCCAGAGTCTCAAGCTCCCGCCGCAAGAGTCGGAAGGCTCACTTCACAGCGCCGTCGAGCGTCCGGCGTGTTCTGATGAGCGCGCCCCTCTCCGGCGA
CCTCCGCTCCAAGTACAATGTCCGATCCATGCCGATCCGCAAGGACGACGAGGTTCAGATCTCGAGAGGAACCTTCAAAGGCCGCGAAGGCAAGGTCGTTCAGGTCTACC
GTCGCAAGTGGGTGATTCACATCGAGCGCATCACCAGAGAGAAGGTTAACGGCTCCACCGTCAACGTCGGAATCAATCCGTCCAAGGTTATGATCACTAAGCTGAAGCTG
GATAAGGACAGGAAGTCGCTGCTCGATCGTAGGGCCAAGGGCCGTGCTTCTGCAGATAAGGATAAGGCCACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTA
A
mRNA sequenceShow/hide mRNA sequence
TTTAAAGCCCATGAACCGTCCATTTCAATTTCCCCGATCCCCCGAGATCGGAACTGCAGAGACACCAAAACCCTAACAATGAAGTACAACCCCAGAGTCTCAAGCTCCCG
CCGCAAGAGTCGGAAGGCTCACTTCACAGCGCCGTCGAGCGTCCGGCGTGTTCTGATGAGCGCGCCCCTCTCCGGCGACCTCCGCTCCAAGTACAATGTCCGATCCATGC
CGATCCGCAAGGACGACGAGGTTCAGATCTCGAGAGGAACCTTCAAAGGCCGCGAAGGCAAGGTCGTTCAGGTCTACCGTCGCAAGTGGGTGATTCACATCGAGCGCATC
ACCAGAGAGAAGGTTAACGGCTCCACCGTCAACGTCGGAATCAATCCGTCCAAGGTTATGATCACTAAGCTGAAGCTGGATAAGGACAGGAAGTCGCTGCTCGATCGTAG
GGCCAAGGGCCGTGCTTCTGCAGATAAGGATAAGGCCACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTAAGTTCTGTTAGTTTTTATCCCCTTGCTTGTTT
TGATATCTGATTTGGCCTGGAAAGATGATACAATGATTTCATGTTTGATGCATTGAGTTCTTTTTTATTCTATGAAATTTCATTAGACTTATGTTAATATACTATTTGTT
GATCTTAGGATTGGTATTTGAATAAATATAGGCAATTGTTTAAAGGCTTGCATATTTTAGGAGGATTTGCATATTCATTGAGCTGATTGAAGCCTTTCAGCATATTCCTC
TGAAAGGATTATTTTCAAATTCTTCTACAATTGTTTGAAGTTGAGAAGGAGAGAAACAACAGAACTTTTCAAGATGAATCTCTTTCTTTTGATAAATTTAGGGAACCTAC
TTTGTATACTGCCCTTTTTTTGGTTCCATCTCTTAAAACCTTTAGTGATTATTAGCCTATCTTTGTACTGTTTCCAAGGGATTCCTCTTTTCGGATGAATGAAAGTATTG
TTTCCTATAAATAAATGTTGAAAA
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQISRGTFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKL
DKDRKSLLDRRAKGRASADKDKATKFTAEDIMQSVD