; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017612 (gene) of Chayote v1 genome

Gene IDSed0017612
OrganismSechium edule (Chayote v1)
DescriptionPAP_fibrillin domain-containing protein
Genome locationLG06:46522299..46538439
RNA-Seq ExpressionSed0017612
SyntenySed0017612
Gene Ontology termsNA
InterPro domainsIPR006843 - Plastid lipid-associated protein/fibrillin conserved domain
IPR039633 - Plastid-lipid-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581758.1 Pumilio-like 5, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8989.01Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VETYNMG PIDL KLDGTWRLQYTSAPDVL+LL+AA+ LPFFQIGQIFQKFECR+ SN+GIVRNVVRWSIPSLLEEQEGA LLVSAKFSVVSLRNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQ
        L+FE+ISVQN+KISEELQALIAPAILPRSFISL+ILQFLRGF+A VPVRNS R R VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQ
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQ

XP_022145750.1 probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Momordica charantia]4.0e-8885.57Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VE YNMG PIDL KLDGTWRLQYTSAPDVL+LL+AAS LPFFQ+GQIFQKFEC + SN+GIVRNVVRWSIPSLLEEQEGA L+VSAKFSVVS+RNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGRE--VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+ISVQNLKISEELQALIAPAILPRSFISL+ILQFLRGF+A +PVR+SGR R   VGGLYYLSYLDGNMLLGR+VGGGGVFVFTRAQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGRE--VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

XP_022956189.1 probable plastid-lipid-associated protein 10, chloroplastic [Cucurbita moschata]1.1e-9089.06Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VETYNMG PIDL KLDGTWRLQYTSAPDVL+LL+AA+ LPFFQIGQIFQKFECR+ SN+GIVRNVVRWSIPSLLEEQEGA LLVSAKFSVVSLRNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+ISVQN+KISEELQALIAPAILPRSFISL+ILQFLRGF+A VPVRNS R R VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

XP_023527019.1 probable plastid-lipid-associated protein 10, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]1.5e-9089.06Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VETYNMG PIDL KLDGTWRLQYTSAPDVL+LL+AA+ LPFFQIGQIFQKFECR+ SN+GIVRNVVRWSIPSLLEEQEGA LLVSAKFSVVSLRNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+ISVQN+KISEELQALIAPAILPRSFISL+ILQFLRGF+A VPVRNS R R VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

XP_038897398.1 probable plastid-lipid-associated protein 10, chloroplastic [Benincasa hispida]2.5e-9087.5Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VE YNMG PIDL KLDGTWRLQYTSAPDVL+LL+AA+ LPFFQIGQIFQKFECR+ SN+GIVRNVVRWSIPSLLEE EGA LLVSAKFSVVSLRNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+IS+QN+KISEELQALIAPAILPRSF+SL+ILQFLRGF+AGVPVRNSGR R VGGLYYLSYLDGNMLLGRAVGGGGVFVFT+AQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

TrEMBL top hitse value%identityAlignment
A0A0A0L8Y5 PAP_fibrillin domain-containing protein2.5e-8885.42Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VE Y+MG PIDL KLDGTWRLQYTSAPDVL+LL+AA  LPFFQIGQIFQKFEC++ SN+GIVRNVVRWSIPSLLEEQEGA LLVSAKFSVVSLRNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+ISVQN+KISE+LQALIAPAILPRSF+SL+ILQFLR F+ GVPVRNSG  R VGGLYYLSYLDGNMLLGRAVGGGGVFVFT+AQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

A0A6J1CVF1 probable plastid-lipid-associated protein 10, chloroplastic isoform X11.9e-8885.57Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VE YNMG PIDL KLDGTWRLQYTSAPDVL+LL+AAS LPFFQ+GQIFQKFEC + SN+GIVRNVVRWSIPSLLEEQEGA L+VSAKFSVVS+RNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGRE--VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+ISVQNLKISEELQALIAPAILPRSFISL+ILQFLRGF+A +PVR+SGR R   VGGLYYLSYLDGNMLLGR+VGGGGVFVFTRAQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGRE--VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

A0A6J1CX90 probable plastid-lipid-associated protein 10, chloroplastic isoform X21.9e-8885.57Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VE YNMG PIDL KLDGTWRLQYTSAPDVL+LL+AAS LPFFQ+GQIFQKFEC + SN+GIVRNVVRWSIPSLLEEQEGA L+VSAKFSVVS+RNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGRE--VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+ISVQNLKISEELQALIAPAILPRSFISL+ILQFLRGF+A +PVR+SGR R   VGGLYYLSYLDGNMLLGR+VGGGGVFVFTRAQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGRE--VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

A0A6J1GYC1 probable plastid-lipid-associated protein 10, chloroplastic5.4e-9189.06Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V+VETYNMG PIDL KLDGTWRLQYTSAPDVL+LL+AA+ LPFFQIGQIFQKFECR+ SN+GIVRNVVRWSIPSLLEEQEGA LLVSAKFSVVSLRNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        L+FE+ISVQN+KISEELQALIAPAILPRSFISL+ILQFLRGF+A VPVRNS R R VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

A0A6J1IS33 probable plastid-lipid-associated protein 10, chloroplastic8.0e-8789.67Show/hide
Query:  MGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIYLQFEKISV
        MG PIDL KLDGTWRLQYTSAPDVL+LL+AA+ LPFFQIGQIFQKFECR+ SN+GIVRNVVRWSIPSLLEEQEGA LLVSAKFSVVSLRNIYL+FE+ISV
Subjt:  MGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIYLQFEKISV

Query:  QNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
        QN+KISEELQALIAPAILPRSFISL+ILQFLRGF+A VPVRNS R R VGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC
Subjt:  QNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC

SwissProt top hitse value%identityAlignment
Q8W4F1 Probable plastid-lipid-associated protein 10, chloroplastic1.2e-7471.88Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V VE +N G  ID  KLDGTWRLQYTSAPDV+VL +AAS LPFFQ+GQ+FQKFECR+ S+ GI+RNVV+WS+PSLLEEQEGA L+V+AKF  VS RNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRG-REVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQ
        LQFE+ISV+N+ I+E+LQALIAPAILPRSF+SL++LQF+R F+A +PV  +  G R VGGLYYLSYLD NMLLGR+VGGGGVFVFT++QPL+
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRG-REVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQ

Arabidopsis top hitse value%identityAlignment
AT2G46910.1 Plastid-lipid associated protein PAP / fibrillin family protein8.2e-7671.88Show/hide
Query:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY
        +V VE +N G  ID  KLDGTWRLQYTSAPDV+VL +AAS LPFFQ+GQ+FQKFECR+ S+ GI+RNVV+WS+PSLLEEQEGA L+V+AKF  VS RNIY
Subjt:  MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIY

Query:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRG-REVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQ
        LQFE+ISV+N+ I+E+LQALIAPAILPRSF+SL++LQF+R F+A +PV  +  G R VGGLYYLSYLD NMLLGR+VGGGGVFVFT++QPL+
Subjt:  LQFEKISVQNLKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRG-REVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATGTAGAGACGTATAACATGGGTTTCCCTATTGACCTTACGAAGTTGGATGGTACATGGCGCCTACAGTATACTTCTGCTCCTGATGTTCTTGTTCTTCTACA
AGCTGCATCCACCCTTCCTTTCTTTCAGATTGGCCAAATCTTCCAGAAATTTGAATGTCGTGAAGGTTCGAATCAAGGAATTGTTCGAAATGTCGTTCGCTGGAGTATCC
CATCACTGTTAGAGGAACAGGAAGGAGCAGCACTGCTTGTTTCTGCTAAATTTTCTGTTGTTTCTTTGCGTAATATCTACCTCCAATTTGAGAAGATTAGTGTCCAAAAT
TTAAAGATAAGCGAAGAGTTGCAGGCTTTAATTGCTCCAGCAATACTACCACGGTCATTTATAAGTCTTGAGATCTTGCAATTTCTTCGGGGTTTTGAAGCTGGAGTTCC
GGTGAGAAATTCAGGGAGAGGACGAGAAGTGGGTGGTCTGTATTATCTTTCATATTTGGATGGAAATATGCTATTGGGTCGAGCAGTGGGCGGCGGCGGAGTTTTTGTGT
TTACCAGAGCTCAACCTCTCCAATGCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAATTATGTTATTATAAGATATACCATAATATTAAATTATTTTTTGTTTAAAAAAAATTGAAGTTAAATGAAAGAAACATGCACATATATTTGAAATAGCAATTAA
ACAAATCAATATCCTTAATAAAGACTTCGCATAGTTGTTGGACTTCTTCATAAACTAATTCTAGGTTCTTTTTGTGGATATTAAGTTAGGATATTGATAAATAAATAAAA
ATTTAACAAGGTGCATGCCTTGGCCTGAGGCGAAGGTGATGCAGGGCGCAAAATAGCGAGGAAAGGTGAGGGCCTGATTGAAGGAGCTCGCCTTAGCTACTTTAGAGGCG
CAATACCTACCTATGTGCAAGGCGATGGCCATAGGCGAGGAAAGGCGATAGCCTTGAAAACACTGCATGGAAGAGAGGTGATAGTTTGCACCAGGAAATAACAGTAATGG
TGGATGTAGAGACGTATAACATGGGTTTCCCTATTGACCTTACGAAGTTGGATGGTACATGGCGCCTACAGTATACTTCTGCTCCTGATGTTCTTGTTCTTCTACAAGCT
GCATCCACCCTTCCTTTCTTTCAGATTGGCCAAATCTTCCAGAAATTTGAATGTCGTGAAGGTTCGAATCAAGGAATTGTTCGAAATGTCGTTCGCTGGAGTATCCCATC
ACTGTTAGAGGAACAGGAAGGAGCAGCACTGCTTGTTTCTGCTAAATTTTCTGTTGTTTCTTTGCGTAATATCTACCTCCAATTTGAGAAGATTAGTGTCCAAAATTTAA
AGATAAGCGAAGAGTTGCAGGCTTTAATTGCTCCAGCAATACTACCACGGTCATTTATAAGTCTTGAGATCTTGCAATTTCTTCGGGGTTTTGAAGCTGGAGTTCCGGTG
AGAAATTCAGGGAGAGGACGAGAAGTGGGTGGTCTGTATTATCTTTCATATTTGGATGGAAATATGCTATTGGGTCGAGCAGTGGGCGGCGGCGGAGTTTTTGTGTTTAC
CAGAGCTCAACCTCTCCAATGCTAAACCGCCCTCACCTTGGTGGCGTTCTCAAATCAACACATCCTTCATTTGTAAGACAGGTGTCGTTGAACGTGTCAACTCGGATGTT
TCGTGGGACATCCACCGAATTTGCATAGTATACCACTAGTGTCTTTTGTTATCTCTGTCGTTTTTTAGATCATGAGCACATATTTATTATGTCAATTGGGCTGTCAATTG
AGCCAAACTTTCATGGGCTCACCTCTATCATTTAAGTTGTTGCTTCTTTATCGTGTTTTTATTGTATTAATCATTCTATTATATCACTCCCACGGACCCACACCCAGCTC
TCATTTCCTTGCATTAAGGGTAAGTACGCTATTAGATAAGCAGCAAGATGAGC
Protein sequenceShow/hide protein sequence
MVDVETYNMGFPIDLTKLDGTWRLQYTSAPDVLVLLQAASTLPFFQIGQIFQKFECREGSNQGIVRNVVRWSIPSLLEEQEGAALLVSAKFSVVSLRNIYLQFEKISVQN
LKISEELQALIAPAILPRSFISLEILQFLRGFEAGVPVRNSGRGREVGGLYYLSYLDGNMLLGRAVGGGGVFVFTRAQPLQC