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Sed0017633 (gene) of Chayote v1 genome

Gene IDSed0017633
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationLG01:1845670..1849015
RNA-Seq ExpressionSed0017633
SyntenySed0017633
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4593.75Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT
        MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVF+NLTSRLQT
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT

KAG6605018.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4593.75Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT
        MGIRLPSLLLNAKQ VKMHTASSRN+CGVPKGHIAVYVGDIERKRFVVPI+YLNHPSFSALL SAEEEFGFKHPTGGLTIPCREDVF+NLTSRLQ+
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT

KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]1.6e-4595.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        MGIRLPSLLLNAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVF+NLTSRLQ
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]4.7e-4594.74Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVF+NLTSRLQ
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]4.7e-4594.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT
        MGIRLPSLLLNAKQVVKM T  SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVF+NLTSRLQT
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein7.8e-4695.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        MGIRLPSLLLNAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVF+NLTSRLQ
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

A0A1S3C787 auxin-responsive protein SAUR21-like2.3e-4594.74Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVF+NLTSRLQ
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

A0A5D3BMR1 Auxin-responsive protein SAUR21-like2.3e-4594.74Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVF+NLTSRLQ
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

A0A6J1FVH4 auxin-responsive protein SAUR21-like2.9e-4593.75Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT
        MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVF+NLTSRLQT
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT

A0A6J1JGW3 auxin-responsive protein SAUR21-like2.3e-4594.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT
        MGIRLPSLLLNAKQVVKM T  SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVF+NLTSRLQT
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.6e-2458.62Show/hide
Query:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        LL AK+++   TA+       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED F+N+TSRLQ
Subjt:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.6e-2459.77Show/hide
Query:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        LL AK+++   TAS+      PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED F+N+TSRLQ
Subjt:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.8e-2458.62Show/hide
Query:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        LL AK+++   T ++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED F+N+TSR Q
Subjt:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.8e-2458.62Show/hide
Query:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        LL AK+++   TA+       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED F+N+TSRLQ
Subjt:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.6e-2458.62Show/hide
Query:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED F+N+TSRLQ
Subjt:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.7e-2755.67Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT
        M IR+  +L ++KQ++K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +F++L SRL T
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQT

AT4G34810.1 SAUR-like auxin-responsive protein family3.0e-2655.24Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTASSRNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNL-
        MG+   ++    KQ++K+++ ++RN+        VPKGH+AVYVG   ++E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLNAKQVVKMHTASSRNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.0e-2654.64Show/hide
Query:  MGIRLPSLLLNAKQVVK----MHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSR
        M IR+P +L ++KQ+++    + ++SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E++F++L SR
Subjt:  MGIRLPSLLLNAKQVVK----MHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSR

AT5G18050.1 SAUR-like auxin-responsive protein family1.1e-2558.62Show/hide
Query:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        LL AK+++   TA+       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED F+N+TSRLQ
Subjt:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.1e-2558.62Show/hide
Query:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED F+N+TSRLQ
Subjt:  LLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGGTTACCTTCACTTCTCCTTAATGCCAAGCAAGTTGTCAAAATGCATACCGCTTCTTCGAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATTGAAAGAAAGCGATTCGTAGTTCCGATATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAAAGTGCAGAAGAAGAGTTTGGATTTAAACATC
CAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTATTCGTCAACCTCACATCCAGGCTGCAAACTTTCTGA
mRNA sequenceShow/hide mRNA sequence
CAAACACATTCTATTTCGAGTACGAAAATACCCAACTTCTAGATCTACACCTCCGTTCAAAAGTAAACATGGGAATCAGGTTACCTTCACTTCTCCTTAATGCCAAGCAA
GTTGTCAAAATGCATACCGCTTCTTCGAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATTGAAAGAAAGCGATTCGTAGTTCCGATATC
ATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAAAGTGCAGAAGAAGAGTTTGGATTTAAACATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTATTCG
TCAACCTCACATCCAGGCTGCAAACTTTCTGAAAGAAAGAACAAAAATCCTCCACAGTTCTGTTAGATTCAATGTATAGTTATTTTCAACAAGTTAGTGATCAAGCAGCT
GATAGGTTACATATTGCCTATCCACCTGAACATCATTTACCTAACCTAGGATTACAGAGTTGTAAACATGAACATAGAAATACAATCACATTTTCTTAC
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQVVKMHTASSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFVNLTSRLQTF