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Sed0017653 (gene) of Chayote v1 genome

Gene IDSed0017653
OrganismSechium edule (Chayote v1)
DescriptionTF-B3 domain-containing protein
Genome locationLG08:6244578..6245132
RNA-Seq ExpressionSed0017653
SyntenySed0017653
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]2.0e-2546.48Show/hide
Query:  DNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSN
        +NN    +  + A  D   + P M    +IIG  SP FVK+LT TD++ + GR+ + KEFV  NLVP+FN DE L  GI V V+D++ R Y+MTF+ W++
Subjt:  DNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSN

Query:  KLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI
        KLYVLTK W +F   N L   +E +T+ MFRH    +LCFAI
Subjt:  KLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2846.1Show/hide
Query:  MNHVNNKEQDNNEQRPLLPLAAVGD--APEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRR
        M+  N     N ++   L +  V +  AP V P +    +IIG  SP + K+LT +D+S   GR+ V KEFV  +L+P+FNADE+ +EGIDV V++ + R
Subjt:  MNHVNNKEQDNNEQRPLLPLAAVGD--APEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRR

Query:  AYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAIT
         Y+M FK W++KLYVLTKGWN F +TNNL +    VT+ MFRH  T ++CFA+T
Subjt:  AYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAIT

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-2846.75Show/hide
Query:  MNHVNNKEQDNNEQRPLLPLAAVGD--APEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRR
        M+  N     N ++   L +  V +  AP V P +    +IIG  SP + K+LT +D+S   GR+ V KEFV  +L+P+FNADE+ +EGIDV V++ + R
Subjt:  MNHVNNKEQDNNEQRPLLPLAAVGD--APEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRR

Query:  AYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAIT
         Y+M FK W++KLYVLTKGWN F +TNNL E    VT+ MFRH  T ++CFA+T
Subjt:  AYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAIT

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]7.5e-2847.26Show/hide
Query:  NKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFK
        N + DN     +     VG      P M    +IIG  SP FVK+LT TD++ N GR+ + KEFV LNL P+FN DE+L +GI V+V+D + R Y+M FK
Subjt:  NKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFK

Query:  RWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI
         W++KLYVLTK W  F +TN+L +  E +++ MFRH  T +LCFAI
Subjt:  RWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]3.5e-2539.11Show/hide
Query:  PLSTMGSSNSNNLNEDVIEAAHTLYVIWMNHVNNKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVEL
        P++ + +  S++ +  ++     + +     VN    +NN +   + +A   D   V P M    +IIG  SP FVK+L  TD++ + GR+ + KEFV  
Subjt:  PLSTMGSSNSNNLNEDVIEAAHTLYVIWMNHVNNKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVEL

Query:  NLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI
        NL+P+FN  ENL  GI V V+D++ R Y+M FK W++KLYVLTK WN+F ++NNL    E +++ MFRH    +LCFAI
Subjt:  NLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein3.6e-2847.26Show/hide
Query:  NKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFK
        N + DN     +     VG      P M    +IIG  SP FVK+LT TD++ N GR+ + KEFV LNL P+FN DE+L +GI V+V+D + R Y+M FK
Subjt:  NKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFK

Query:  RWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI
         W++KLYVLTK W  F +TN+L +  E +++ MFRH  T +LCFAI
Subjt:  RWSNKLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI

A0A0A0LC65 TF-B3 domain-containing protein1.1e-2450.42Show/hide
Query:  MREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANE
        M    +IIG  SP FVK+L  TD++ + GR+ + KEFV  NL+P+FN  ENL  GI V V+D++ R Y+M FK W++KLYVLTK WN+F ++NNL    E
Subjt:  MREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSNKLYVLTKGWNRFVQTNNL-EANE

Query:  SVTMGMFRHANTGRLCFAI
         +++ MFRH    +LCFAI
Subjt:  SVTMGMFRHANTGRLCFAI

A0A5D3BAS8 Putative B3 domain-containing protein9.9e-2646.48Show/hide
Query:  DNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSN
        +NN    +  + A  D   + P M    +IIG  SP FVK+LT TD++ + GR+ + KEFV  NLVP+FN DE L  GI V V+D++ R Y+MTF+ W++
Subjt:  DNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSN

Query:  KLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI
        KLYVLTK W +F   N L   +E +T+ MFRH    +LCFAI
Subjt:  KLYVLTKGWNRFVQTNNL-EANESVTMGMFRHANTGRLCFAI

A0A6J1CTE7 putative B3 domain-containing protein At4g031701.7e-2241.72Show/hide
Query:  NKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFN---ADENLNEGIDVMVFDAQRRAYNM
        N   D  E+R + P+ A+              D+IG  S ++ K+LT++D++   GR+ + KEFV   L P+FN    +ENL EGI+V V++ + R + M
Subjt:  NKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFN---ADENLNEGIDVMVFDAQRRAYNM

Query:  TFKRWSNKLYVLTKGWNRFVQTNNL---EANESVTMGMFRHANTGRLCFAI
        TFK W++KLYVL KGW  F + NNL    A E +T+ MFRH  T  LCFAI
Subjt:  TFKRWSNKLYVLTKGWNRFVQTNNL---EANESVTMGMFRHANTGRLCFAI

V7BSP3 TF-B3 domain-containing protein3.0e-2240.8Show/hide
Query:  APEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSNKLYVLTKGWNRFVQTN
        +P   P M  F + I  H     KKLT +D++VN  R+ ++K  VE + +PL   DEN+  GI V V+DA +  +++TFK+W+NK YVL  GW  F Q +
Subjt:  APEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWSNKLYVLTKGWNRFVQTN

Query:  NLEANESVTMGMFRHANTGRLCFAI
         L+ ++S+T+ +FRH++  +LCFA+
Subjt:  NLEANESVTMGMFRHANTGRLCFAI

SwissProt top hitse value%identityAlignment
P82280 AP2/ERF and B3 domain-containing transcription repressor RAV24.2e-0526.77Show/hide
Query:  QDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-
        + NN+++  L + A G     S    +   ++      F K +T +D+     R+ + K+  E +  PL +    + +G+ +   D   + +   +  W 
Subjt:  QDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-

Query:  SNKLYVLTKGWNRFVQTNNLEANESVT
        S++ YVLTKGW+RFV+  NL A + VT
Subjt:  SNKLYVLTKGWNRFVQTNNLEANESVT

Q9LM90 B3 domain-containing protein At1g206008.4e-0633.33Show/hide
Query:  KKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNN-LEANESVTMG
        K+L  +D+  +  R+ +SKE V+  ++P     E+  +G+DV V+        M FK W+ +K  VLT GW +FV     L+ ++ VT G
Subjt:  KKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNN-LEANESVTMG

Q9ZR14 Putative B3 domain-containing protein At4g031701.3e-1135.65Show/hide
Query:  DIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNNLEAN-ESVTM
        ++  + S    K+L  +D+  +   + +SKE V+  ++P     EN  +GIDV V+    +   M FK W+ +K  VLT GW +FV+   L    + VT+
Subjt:  DIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNNLEAN-ESVTM

Query:  GMFRHANTGRLCFAI
         MFRH  T +LCFAI
Subjt:  GMFRHANTGRLCFAI

Arabidopsis top hitse value%identityAlignment
AT1G20600.1 AP2/B3-like transcriptional factor family protein6.0e-0733.33Show/hide
Query:  KKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNN-LEANESVTMG
        K+L  +D+  +  R+ +SKE V+  ++P     E+  +G+DV V+        M FK W+ +K  VLT GW +FV     L+ ++ VT G
Subjt:  KKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNN-LEANESVTMG

AT1G68840.1 related to ABI3/VP1 23.0e-0626.77Show/hide
Query:  QDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-
        + NN+++  L + A G     S    +   ++      F K +T +D+     R+ + K+  E +  PL +    + +G+ +   D   + +   +  W 
Subjt:  QDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-

Query:  SNKLYVLTKGWNRFVQTNNLEANESVT
        S++ YVLTKGW+RFV+  NL A + VT
Subjt:  SNKLYVLTKGWNRFVQTNNLEANESVT

AT1G68840.2 related to ABI3/VP1 23.0e-0626.77Show/hide
Query:  QDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-
        + NN+++  L + A G     S    +   ++      F K +T +D+     R+ + K+  E +  PL +    + +G+ +   D   + +   +  W 
Subjt:  QDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-

Query:  SNKLYVLTKGWNRFVQTNNLEANESVT
        S++ YVLTKGW+RFV+  NL A + VT
Subjt:  SNKLYVLTKGWNRFVQTNNLEANESVT

AT2G36080.2 AP2/B3-like transcriptional factor family protein7.3e-0526.85Show/hide
Query:  DIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-SNKLYVLTKGWNRFVQTNNLEANESVTMG
        D++      F K LT +D+     R+ + K+  E        A + + +G+ +   D + + +   +  W S++ YVLTKGW+R+V+  +L+A + V   
Subjt:  DIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRW-SNKLYVLTKGWNRFVQTNNLEANESVTMG

Query:  MFRHANTG
          RH + G
Subjt:  MFRHANTG

AT4G03170.1 AP2/B3-like transcriptional factor family protein9.5e-1335.65Show/hide
Query:  DIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNNLEAN-ESVTM
        ++  + S    K+L  +D+  +   + +SKE V+  ++P     EN  +GIDV V+    +   M FK W+ +K  VLT GW +FV+   L    + VT+
Subjt:  DIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLFNADENLNEGIDVMVFDAQRRAYNMTFKRWS-NKLYVLTKGWNRFVQTNNLEAN-ESVTM

Query:  GMFRHANTGRLCFAI
         MFRH  T +LCFAI
Subjt:  GMFRHANTGRLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAGGAGTCCACCACTTTCCACTATGGGTAGCAGTAACTCCAATAACTTAAACGAAGATGTCATTGAAGCAGCTCACACTCTTTATGTCATATGGATGAACCATGTGAA
CAATAAGGAGCAGGACAATAATGAACAACGACCACTCTTGCCATTGGCGGCGGTTGGCGATGCTCCAGAGGTGAGTCCGTGGATGCGAGAGTTCGCGGATATAATCGGAG
TGCACAGCCCATCATTCGTGAAAAAATTAACCATAACAGACATGTCAGTGAATCATGGGCGAGTTACAGTGTCTAAGGAATTTGTGGAGTTAAATTTGGTTCCATTGTTC
AATGCGGATGAGAATTTAAATGAAGGAATTGACGTTATGGTTTTTGATGCTCAAAGGAGGGCATACAACATGACGTTCAAGCGTTGGTCTAACAAGCTCTACGTGCTCAC
AAAAGGCTGGAATAGGTTTGTCCAGACAAATAATTTGGAGGCTAATGAGTCTGTGACTATGGGGATGTTCCGACATGCCAATACTGGGAGGCTTTGCTTTGCCATTACTC
AGTGA
mRNA sequenceShow/hide mRNA sequence
GAGAGGAGTCCACCACTTTCCACTATGGGTAGCAGTAACTCCAATAACTTAAACGAAGATGTCATTGAAGCAGCTCACACTCTTTATGTCATATGGATGAACCATGTGAA
CAATAAGGAGCAGGACAATAATGAACAACGACCACTCTTGCCATTGGCGGCGGTTGGCGATGCTCCAGAGGTGAGTCCGTGGATGCGAGAGTTCGCGGATATAATCGGAG
TGCACAGCCCATCATTCGTGAAAAAATTAACCATAACAGACATGTCAGTGAATCATGGGCGAGTTACAGTGTCTAAGGAATTTGTGGAGTTAAATTTGGTTCCATTGTTC
AATGCGGATGAGAATTTAAATGAAGGAATTGACGTTATGGTTTTTGATGCTCAAAGGAGGGCATACAACATGACGTTCAAGCGTTGGTCTAACAAGCTCTACGTGCTCAC
AAAAGGCTGGAATAGGTTTGTCCAGACAAATAATTTGGAGGCTAATGAGTCTGTGACTATGGGGATGTTCCGACATGCCAATACTGGGAGGCTTTGCTTTGCCATTACTC
AGTGA
Protein sequenceShow/hide protein sequence
ERSPPLSTMGSSNSNNLNEDVIEAAHTLYVIWMNHVNNKEQDNNEQRPLLPLAAVGDAPEVSPWMREFADIIGVHSPSFVKKLTITDMSVNHGRVTVSKEFVELNLVPLF
NADENLNEGIDVMVFDAQRRAYNMTFKRWSNKLYVLTKGWNRFVQTNNLEANESVTMGMFRHANTGRLCFAITQ