; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017657 (gene) of Chayote v1 genome

Gene IDSed0017657
OrganismSechium edule (Chayote v1)
DescriptionGibberellin-regulated family protein
Genome locationLG14:17756540..17757298
RNA-Seq ExpressionSed0017657
SyntenySed0017657
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026958.1 Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3987.5Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK G +SLVLVSLVLSSF LQHAI  ADSS T  PS CDSKCG RCL AGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_008440339.1 PREDICTED: peamaclein-like [Cucumis melo]1.6e-3783.33Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V+LVL+S +LSSFFLQ+    ADSSTT  PS+CDSKCGVRCL AGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_022963307.1 peamaclein-like [Cucurbita moschata]8.4e-3986.46Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK G +SLVLVSLVLSSF LQHAI  ADS  T  PS CDSKCG RCL AGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_023003134.1 peamaclein-like [Cucurbita maxima]2.5e-3884.38Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK G +SLVLVSL+LSSF L HAI  ADSS T  PS CDSKCG RCL AGVKDRC+KYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742788.1 peamaclein-like isoform X2 [Cucumis sativus]1.4e-3885.42Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V+LVL+SL+LSSFFLQ+A   ADSSTT  PS+CDSKCGVRCL AGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein5.0e-3783.51Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTP-SLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V+LVL+SL+LSSFFLQ+A   ADSSTT  P  +CDSKCGVRCL AGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTP-SLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like7.7e-3883.33Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V+LVL+S +LSSFFLQ+    ADSSTT  PS+CDSKCGVRCL AGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A5N6QNF2 Uncharacterized protein1.0e-2966Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVD----ADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK    +L+L+S++L S FLQ A+ D    A   T    S CDSKCG RC  AGVKDRCL+YCG+CC QCKCVPSGTYGNKSECPCYRD LNSKGK+KCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVD----ADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like4.1e-3986.46Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK G +SLVLVSLVLSSF LQHAI  ADS  T  PS CDSKCG RCL AGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like1.2e-3884.38Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK G +SLVLVSL+LSSF L HAI  ADSS T  PS CDSKCG RCL AGVKDRC+KYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 83.3e-2255.21Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V   ++SL+L+S F    +  ADSS       C  KC VRC KAG  + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 72.6e-2256.38Show/hide
Query:  VSLVLVSLVLSSFFLQHAIVDADSSTTNTPSL---CDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +S  L S  +S  F   A+  A  S  + P+L   C  KC  RC +AG+KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VSLVLVSLVLSSFFLQHAIVDADSSTTNTPSL---CDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

P86888 Peamaclein9.4e-2577.05Show/hide
Query:  SLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        S CDSKCGVRC KAG ++RCLKYCG+CC++C CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  SLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 104.4e-2256.84Show/hide
Query:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        P    L++  L+ SS F+   +  ADSS       C  KC VRC KAG +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-16.9e-2861.46Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   ++L+LV+LV++   +Q        +T    S CDSKC +RC KAG+ DRCLKYCG+CC++CKCVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein3.8e-2153.68Show/hide
Query:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        P  V   ++SL+L+S F  + +  ADSS       C  KC VRC KA    + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein4.9e-2153.68Show/hide
Query:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        P  V   ++SL+L+S F  + +  ADSS       C  KC VRC KA    + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein1.8e-2356.38Show/hide
Query:  VSLVLVSLVLSSFFLQHAIVDADSSTTNTPSL---CDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +S  L S  +S  F   A+  A  S  + P+L   C  KC  RC +AG+KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VSLVLVSLVLSSFFLQHAIVDADSSTTNTPSL---CDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein2.4e-2355.21Show/hide
Query:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V   ++SL+L+S F    +  ADSS       C  KC VRC KAG  + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein3.1e-2356.84Show/hide
Query:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        P    L++  L+ SS F+   +  ADSS       C  KC VRC KAG +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  PGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTGGTTTTGTCAGTTTGGTTCTTGTTTCATTGGTTCTGAGCTCTTTCTTCCTCCAACATGCCATTGTTGATGCTGATTCCTCTACAACCAATACTCCAAGTCT
TTGTGATTCAAAATGTGGGGTAAGGTGTTTGAAAGCAGGGGTGAAGGACAGGTGTCTTAAGTATTGTGGACTCTGCTGCCAACAATGCAAGTGTGTGCCCTCTGGAACCT
ATGGAAACAAGTCAGAGTGCCCTTGTTACAGAGACAAGTTGAACTCCAAGGGCAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
TCCTACTGAATCATACCCCACTTTCCCATTAATAAAACATTCTTTACAGACTCTTTCCAATTATAAATATCAGATAGAAACTGTTGATACCTTAAAAACACAAGGAGAAA
AATGAAACCTGGTTTTGTCAGTTTGGTTCTTGTTTCATTGGTTCTGAGCTCTTTCTTCCTCCAACATGCCATTGTTGATGCTGATTCCTCTACAACCAATACTCCAAGTC
TTTGTGATTCAAAATGTGGGGTAAGGTGTTTGAAAGCAGGGGTGAAGGACAGGTGTCTTAAGTATTGTGGACTCTGCTGCCAACAATGCAAGTGTGTGCCCTCTGGAACC
TATGGAAACAAGTCAGAGTGCCCTTGTTACAGAGACAAGTTGAACTCCAAGGGCAAATCTAAATGCCCTTGATTTCATTTTCCATTAATGTTCCTTCACTTGAAATCTAT
CATGTTTTCAATTCTCAGTCACTAGAACAAATTTATTTTCTTTCCTGCAGTTTCTTTAATGTGAGTGTGTGTCTGTAACAGGAACAAATCAATTTGTTGAATCAGACTGA
AACATATTCAAGCTAAAGACCATACAGAGTGGAAGCACCTTAACTACTTAGGGTGTGTTTGGGCCCCCGTTTATGTAAA
Protein sequenceShow/hide protein sequence
MKPGFVSLVLVSLVLSSFFLQHAIVDADSSTTNTPSLCDSKCGVRCLKAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP