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Sed0017691 (gene) of Chayote v1 genome

Gene IDSed0017691
OrganismSechium edule (Chayote v1)
Descriptionimmediate early response 3-interacting protein 1-like
Genome locationLG03:2492536..2494968
RNA-Seq ExpressionSed0017691
SyntenySed0017691
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR013880 - Yos1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON89074.1 Yos1-like [Trema orientale]5.4e-2889.61Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEGFLLLANALAILNEDRFLA RGL FSE SGGKTKSFKGQLIGLIYATQYLRVPLI+LN +CI +KFVSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

XP_022134292.1 immediate early response 3-interacting protein 1-like [Momordica charantia]9.1e-2890.91Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEG LLLANALAILNEDRFLA RGLSFSE SGG+TKSFKGQLIGLIYATQYLRVPLIMLN +CIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

XP_022952849.1 immediate early response 3-interacting protein 1-like [Cucurbita moschata]1.1e-2892.21Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEG LLLANALAILNEDRFLARRGLSFSE SGG+TKSFKGQLIGL+YATQYLRVPLIMLN LCIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

XP_022990010.1 immediate early response 3-interacting protein 1-like [Cucurbita maxima]5.4e-2890.91Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEG LLLANALAILNEDRFLARRGLSFSE SGG+TKS KGQLIGL+YATQYLRVPLIMLN LCIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

XP_023516005.1 immediate early response 3-interacting protein 1-like [Cucurbita pepo subsp. pepo]6.3e-2992.21Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSE SGG+TKS KGQLIGL+YATQYLRVPLIMLN LCIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

TrEMBL top hitse value%identityAlignment
A0A0A0KBI3 Uncharacterized protein9.9e-2889.61Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEG LLLANALAILNEDRFLA RGL+FSE SGG+TKSFKGQLIGLIYATQYLRVPLIMLN +CIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

A0A2P5EU65 Yos1-like2.6e-2889.61Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEGFLLLANALAILNEDRFLA RGL FSE SGGKTKSFKGQLIGLIYATQYLRVPLI+LN +CI +KFVSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

A0A6J1C1M0 immediate early response 3-interacting protein 1-like4.4e-2890.91Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEG LLLANALAILNEDRFLA RGLSFSE SGG+TKSFKGQLIGLIYATQYLRVPLIMLN +CIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

A0A6J1GMX2 immediate early response 3-interacting protein 1-like5.2e-2992.21Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEG LLLANALAILNEDRFLARRGLSFSE SGG+TKSFKGQLIGL+YATQYLRVPLIMLN LCIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

A0A6J1JNY1 immediate early response 3-interacting protein 1-like2.6e-2890.91Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MGLWTLLEG LLLANALAILNEDRFLARRGLSFSE SGG+TKS KGQLIGL+YATQYLRVPLIMLN LCIFVK VSG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

SwissProt top hitse value%identityAlignment
Q1JQC2 Immediate early response 3-interacting protein 17.3e-0437.18Show/hide
Query:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG
        L++LL+  LL  NA+A+L+E+RFL   G    +  G  G+    K QL+ LI + +  +RVPLI++N + I +  + G
Subjt:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG

Q3B8G7 Immediate early response 3-interacting protein 12.5e-0438.46Show/hide
Query:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG
        L+TLL+  LL  NA+A+L+E+RFL++ G       G  G+    K QL+ LI + +  +RVPLI++N + I +  + G
Subjt:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG

Q3E834 Protein transport protein YOS19.6e-0440.74Show/hide
Query:  GLWTLLEGFLLLANALAILNEDRFLARRGLSFSESS----GGKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG
        GL  L    LLL NA+A+L+E+RFL R GL  S       G    + K +++ LI A Q  LR+PLI +N+L I  + + G
Subjt:  GLWTLLEGFLLLANALAILNEDRFLARRGLSFSESS----GGKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG

Q4VBI2 Immediate early response 3-interacting protein 13.3e-0435.9Show/hide
Query:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG
        L+ L++  +L  NA+A+L+E+RFL++ G    +  G  G     K QL+ LI + +  +RVPLI +N +CI +  + G
Subjt:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG

Q9Y5U9 Immediate early response 3-interacting protein 17.3e-0437.18Show/hide
Query:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG
        L++LL+  LL  NA+A+L+E+RFL   G    +  G  G+    K QL+ LI + +  +RVPLI++N + I +  + G
Subjt:  LWTLLEGFLLLANALAILNEDRFLARRGLSFSESSG--GKTKSFKGQLIGLIYATQ-YLRVPLIMLNLLCIFVKFVSG

Arabidopsis top hitse value%identityAlignment
AT2G37975.1 Yos1-like protein9.1e-1858.97Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSE-SSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MG WTL+EG LL ANALAILNEDRFLA +G + +E    GK  S KGQ+IGLI+A  Y+R+PL++ NL+ I  K  SG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSE-SSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

AT3G54085.1 Yos1-like protein2.9e-1656.41Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSE-SSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MG WTLL+G LL ANALAILNEDRFL  RG +  E     +  S KGQ+IGLI+A QY+R+PL+++N   I +K +SG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSE-SSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG

AT3G54085.2 Yos1-like protein2.9e-1656.41Show/hide
Query:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSE-SSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG
        MG WTLL+G LL ANALAILNEDRFL  RG +  E     +  S KGQ+IGLI+A QY+R+PL+++N   I +K +SG
Subjt:  MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSE-SSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTTGGACATTACTAGAGGGTTTTCTGCTTCTCGCCAACGCGCTGGCAATTCTAAATGAAGATCGCTTTCTCGCTCGTCGAGGATTGAGCTTCTCCGAATCCTC
AGGAGGCAAAACGAAATCATTCAAGGGACAGCTTATTGGCCTCATCTACGCAACACAATATCTAAGAGTTCCTCTCATAATGCTCAATTTACTCTGCATCTTTGTTAAGT
TTGTATCTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATCACCATCGGCAGCTCTGTGGTTTCTCATCGGCGACTCAACGCTTCAAGATCTCGTTCATCCGCCCTTCTCTCGCCGACTCCAGACAAGACCGCTTTCAGTACAAAGGA
TCCCTAAAAGCCCTCGAAAGTGTGTTTCGAGTAAGTTAGAGCTCAGGTAAATGGGTCTTTGGACATTACTAGAGGGTTTTCTGCTTCTCGCCAACGCGCTGGCAATTCTA
AATGAAGATCGCTTTCTCGCTCGTCGAGGATTGAGCTTCTCCGAATCCTCAGGAGGCAAAACGAAATCATTCAAGGGACAGCTTATTGGCCTCATCTACGCAACACAATA
TCTAAGAGTTCCTCTCATAATGCTCAATTTACTCTGCATCTTTGTTAAGTTTGTATCTGGATGATGAGATGGATGCTGATGCAATATCAACTTCAACTCTCAGAAAGTTT
ATACCTACCATATTATTCTTGATTTCTCTGTGTAATGGAACTTTGAGCTGCTGTAACTTTTGAATTTGCTGAAACTGTTGTTAGAGCCAGAAAGTTTATATATCATATAT
GGCTACTTTGGTTTCATATTGGTCTTTTGCATCAAGATTACCTTATTTTGATTCTTATGCTTGTAGATTCTTGGCATGAC
Protein sequenceShow/hide protein sequence
MGLWTLLEGFLLLANALAILNEDRFLARRGLSFSESSGGKTKSFKGQLIGLIYATQYLRVPLIMLNLLCIFVKFVSG