; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017707 (gene) of Chayote v1 genome

Gene IDSed0017707
OrganismSechium edule (Chayote v1)
DescriptionKH domain-containing protein
Genome locationLG04:15733072..15740360
RNA-Seq ExpressionSed0017707
SyntenySed0017707
Gene Ontology termsGO:0048024 - regulation of mRNA splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily
IPR045071 - KH domain-containing BBP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017179.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-12584.1Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI ++ D DS YLSELL                       ILRVSGMMSNQGFSDLERLR RSPSPM SSNL+SN SG GFGG
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E  LSGNPGMTMDWQGAPASPSSFTVKRIL+LEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        EPLHVLIEADLP N +DIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSN REESPGPS GSVSPFNSSGMKRAKTGR
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

XP_004137670.3 KH domain-containing protein At3g08620 [Cucumis sativus]3.3e-13087.28Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI T+ D DSQYLSELL                       ILRVSGMMSNQGFS+ ERLRHRSPSPMASSNL+SNISGTGFG 
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTGR
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

XP_022157317.1 KH domain-containing protein At3g08620-like [Momordica charantia]3.7e-12986.57Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI ++ D DSQYLSELL                       ILRVSGMMSNQGFSD ERLRHRSPSPMASSNL+SNISGTGFGG
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSG+ GMTMDWQGAPASPSSFTVKRILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTGR
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

XP_022941600.1 KH domain-containing protein At2g38610 [Cucurbita moschata]6.7e-13186.88Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI T+ D DSQYLSELL                       ILRVSGMMSNQGFSD +RLRHRSPSPMASSNLMSNISGTGFG 
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSGNPG TMDWQGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG
        EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG

XP_038905002.1 KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida]1.5e-13087.28Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI ++ D DSQYLSELL                       ILRVSGMMSNQGFSD ERLRHRSPSPMAS+NL+SNISGTGFGG
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTGR
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

TrEMBL top hitse value%identityAlignment
A0A2P5B9Y0 Polyribonucleotide nucleotidyltransferase6.5e-12483.04Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI +T D DSQYLSELL                       ILRVSGMMSNQGF D +RLRHRSPSPMASSNLMSN++G+G GG
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSG PGMTMDWQGAPASPSS+TVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDP+KEEKLRGR GYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        EPLH+LIEADLPANI+DIRLRQAQEIIEELLKPVDE  D+IKRQQLRELAMLNSNFREESPGPS GSVSPFN+SGMKRAKTGR
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

A0A6J1DU72 KH domain-containing protein At3g08620-like1.8e-12986.57Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI ++ D DSQYLSELL                       ILRVSGMMSNQGFSD ERLRHRSPSPMASSNL+SNISGTGFGG
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSG+ GMTMDWQGAPASPSSFTVKRILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTGR
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

A0A6J1FU50 KH domain-containing protein At2g386103.2e-13186.88Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI T+ D DSQYLSELL                       ILRVSGMMSNQGFSD +RLRHRSPSPMASSNLMSNISGTGFG 
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSGNPG TMDWQGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG
        EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG

A0A6J1I3I7 KH domain-containing protein At2g38610-like3.2e-13186.88Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI T+ D DSQYLSELL                       ILRVSGMMSNQGFSD +RLRHRSPSPMASSNLMSNISGTGFG 
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E RLSGNPG TMDWQGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKLRGRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG
        EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG

A0A6J1IZS3 KH domain-containing protein At3g08620-like isoform X11.6e-12583.39Show/hide
Query:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG
        MSGLYNPNFSPARAASPQI ++ D DS YLSELL                       ILR+SGMMSNQGFSDLERLR RSPSPM SSNL+SN+SG GFGG
Subjt:  MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGG

Query:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN
        WNGLP E  LSGNPGMTMDWQGAPASPSSFTVKRIL+LEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDP+KEEKL GRLGYEHLN
Subjt:  WNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLN

Query:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        EPLHVLIEADLP NI+DIRLRQAQEIIEELLKPVDEPND+IKRQQLRELAMLNSN REESPGPS GSVSPFNSSGMKRAKTGR
Subjt:  EPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

SwissProt top hitse value%identityAlignment
Q0WLR1 KH domain-containing protein At4g264801.6e-6350.18Show/hide
Query:  NPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGW-NGL
        +PNFS    + P      +   +YLSELL                       ILRV+ ++ N     L + R   PSP+AS  +  N S     GW +  
Subjt:  NPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGW-NGL

Query:  PDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLH
        P E  +S +P    +W  +P S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG GSIKDP KE+ +RG+ GYEHLNEPLH
Subjt:  PDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLH

Query:  VLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKT
        +L+EA+LP  I+D RL QA+EI+++LL PV+E +DF K+QQLRELA+LN + REE   P  GS+SP+NS GMKRAKT
Subjt:  VLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKT

Q75GR5 KH domain-containing protein SPIN13.6e-9565.49Show/hide
Query:  MSGLYNPNFSPARAASPQI-GTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFG
        MSGLY+P FSPAR  SPQI    TD DSQYL+ELL                       I+RVS ++ N GF D +R R RSPSPM+S N  SN SG GF 
Subjt:  MSGLYNPNFSPARAASPQI-GTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFG

Query:  GWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHL
         WNGL  E RL    G +MDWQGAP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVEA+TGCRV+IRG GSIKDP KE+KLRG+ GYEHL
Subjt:  GWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHL

Query:  NEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        ++PLH+LIEA+ PA+IID RLR AQE+IEELLKPVDE  DF KRQQLRELAMLNS  RE+SP P  GSVSPF++ GMKRAKTG+
Subjt:  NEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

Q8GYR4 KH domain-containing protein At3g086208.8e-11072.98Show/hide
Query:  MSGLYN-PNFSPARAASPQIGT-TTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGF
        MSGLYN  NFSP+RAASPQI T ++D DSQY+S+LL                       I R++GMM NQGF+D +RLRHRSPSPMAS NLMSN+SG G 
Subjt:  MSGLYN-PNFSPARAASPQIGT-TTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGF

Query:  GGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEH
        GGWNGLP E R+ G  GM M+WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKL+G+ GYEH
Subjt:  GGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEH

Query:  LNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        LNE LH+LIEADLP +I+DI+LRQAQEIIEEL+KPVDE  D+IKRQQLRELA+LNSN RE SPGPS GSVSPFNS+ MKR KTGR
Subjt:  LNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

Q9FKT4 KH domain-containing protein At5g561402.4e-6256.25Show/hide
Query:  ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGP
        ILRV+ ++ N        L H  PSP+AS  +  N      G  +  P E  +  +PG   +W  +P S S    KR +R++IPVD YPNFNFVGRLLGP
Subjt:  ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGP

Query:  RGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFR
        RGNSLKRVEA+T CRV IRG GSIKDP KEE +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL P++E +D  K+QQLRELA+LN   R
Subjt:  RGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFR

Query:  EESPGPSGGSVSPFNSSGMKRAKT
        EE   P  GSVSP+NS GMKRAKT
Subjt:  EESPGPSGGSVSPFNSSGMKRAKT

Q9ZVI3 KH domain-containing protein At2g386109.4e-11277Show/hide
Query:  MSGLYNPN--FSPARAASPQIGTTTDTD-SQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTG
        MSGLYN +  FSPARAASPQI +T + D SQYL+ELL                       + RVSGMMSNQGF D +RLRHRSPSPMASSNLMSN+S TG
Subjt:  MSGLYNPN--FSPARAASPQIGTTTDTD-SQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTG

Query:  FGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYE
         GGWNGL  E RLSG PGMTMDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG GSIKDPEKE+KLRGR GYE
Subjt:  FGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYE

Query:  HLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNS-NFREESPGPS-GGSVSPFNSSGMKRAKTG
        HLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE  DFIKRQQLRELA+LNS N REESPGPS GGSVSPFNSSG KR KTG
Subjt:  HLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNS-NFREESPGPS-GGSVSPFNSSGMKRAKTG

Arabidopsis top hitse value%identityAlignment
AT2G38610.1 RNA-binding KH domain-containing protein6.7e-11377Show/hide
Query:  MSGLYNPN--FSPARAASPQIGTTTDTD-SQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTG
        MSGLYN +  FSPARAASPQI +T + D SQYL+ELL                       + RVSGMMSNQGF D +RLRHRSPSPMASSNLMSN+S TG
Subjt:  MSGLYNPN--FSPARAASPQIGTTTDTD-SQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTG

Query:  FGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYE
         GGWNGL  E RLSG PGMTMDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG GSIKDPEKE+KLRGR GYE
Subjt:  FGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYE

Query:  HLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNS-NFREESPGPS-GGSVSPFNSSGMKRAKTG
        HLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE  DFIKRQQLRELA+LNS N REESPGPS GGSVSPFNSSG KR KTG
Subjt:  HLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNS-NFREESPGPS-GGSVSPFNSSGMKRAKTG

AT2G38610.2 RNA-binding KH domain-containing protein6.7e-11377Show/hide
Query:  MSGLYNPN--FSPARAASPQIGTTTDTD-SQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTG
        MSGLYN +  FSPARAASPQI +T + D SQYL+ELL                       + RVSGMMSNQGF D +RLRHRSPSPMASSNLMSN+S TG
Subjt:  MSGLYNPN--FSPARAASPQIGTTTDTD-SQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTG

Query:  FGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYE
         GGWNGL  E RLSG PGMTMDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG GSIKDPEKE+KLRGR GYE
Subjt:  FGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYE

Query:  HLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNS-NFREESPGPS-GGSVSPFNSSGMKRAKTG
        HLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE  DFIKRQQLRELA+LNS N REESPGPS GGSVSPFNSSG KR KTG
Subjt:  HLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNS-NFREESPGPS-GGSVSPFNSSGMKRAKTG

AT3G08620.1 RNA-binding KH domain-containing protein6.3e-11172.98Show/hide
Query:  MSGLYN-PNFSPARAASPQIGT-TTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGF
        MSGLYN  NFSP+RAASPQI T ++D DSQY+S+LL                       I R++GMM NQGF+D +RLRHRSPSPMAS NLMSN+SG G 
Subjt:  MSGLYN-PNFSPARAASPQIGT-TTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGF

Query:  GGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEH
        GGWNGLP E R+ G  GM M+WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG GSIKDPEKEEKL+G+ GYEH
Subjt:  GGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEH

Query:  LNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR
        LNE LH+LIEADLP +I+DI+LRQAQEIIEEL+KPVDE  D+IKRQQLRELA+LNSN RE SPGPS GSVSPFNS+ MKR KTGR
Subjt:  LNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR

AT4G26480.1 RNA-binding KH domain-containing protein1.2e-6450.18Show/hide
Query:  NPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGW-NGL
        +PNFS    + P      +   +YLSELL                       ILRV+ ++ N     L + R   PSP+AS  +  N S     GW +  
Subjt:  NPNFSPARAASPQIGTTTDTDSQYLSELL-----------------------ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGW-NGL

Query:  PDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLH
        P E  +S +P    +W  +P S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG GSIKDP KE+ +RG+ GYEHLNEPLH
Subjt:  PDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLH

Query:  VLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKT
        +L+EA+LP  I+D RL QA+EI+++LL PV+E +DF K+QQLRELA+LN + REE   P  GS+SP+NS GMKRAKT
Subjt:  VLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKT

AT5G56140.1 RNA-binding KH domain-containing protein1.7e-6356.25Show/hide
Query:  ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGP
        ILRV+ ++ N        L H  PSP+AS  +  N      G  +  P E  +  +PG   +W  +P S S    KR +R++IPVD YPNFNFVGRLLGP
Subjt:  ILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGP

Query:  RGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFR
        RGNSLKRVEA+T CRV IRG GSIKDP KEE +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL P++E +D  K+QQLRELA+LN   R
Subjt:  RGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKRQQLRELAMLNSNFR

Query:  EESPGPSGGSVSPFNSSGMKRAKT
        EE   P  GSVSP+NS GMKRAKT
Subjt:  EESPGPSGGSVSPFNSSGMKRAKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGTTTGTATAATCCCAATTTCTCTCCTGCTAGAGCTGCTTCTCCTCAGATTGGAACCACCACTGATACTGACAGCCAGTACCTGTCGGAGCTGTTGATTTTGCG
GGTTTCTGGAATGATGTCGAACCAGGGTTTTAGTGACTTGGAGAGATTACGGCATAGAAGCCCTAGTCCAATGGCTTCTTCTAACCTCATGTCAAATATTTCTGGCACAG
GTTTTGGCGGTTGGAATGGACTTCCTGACGAGACAAGATTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAG
AGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCAAATTTCAATTTTGTTGGGCGGCTTCTTGGACCTAGAGGCAATTCTCTGAAACGTGTTGAAGCGACGACAGG
GTGTCGTGTGTATATAAGAGGAAATGGCTCAATCAAGGATCCAGAAAAGGAAGAGAAACTCCGAGGCAGACTTGGCTATGAACATCTAAACGAACCGCTGCATGTTCTAA
TTGAAGCTGATTTACCAGCCAATATCATTGATATCAGGCTGAGACAGGCACAAGAAATTATTGAAGAACTACTCAAACCAGTGGACGAGCCGAACGATTTTATCAAACGA
CAACAATTGCGCGAATTGGCGATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGTCCGAGTGGTGGCAGTGTTTCTCCTTTCAACTCAAGTGGGATGAAGCGTGCAAA
AACTGGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGTTTGTATAATCCCAATTTCTCTCCTGCTAGAGCTGCTTCTCCTCAGATTGGAACCACCACTGATACTGACAGCCAGTACCTGTCGGAGCTGTTGATTTTGCG
GGTTTCTGGAATGATGTCGAACCAGGGTTTTAGTGACTTGGAGAGATTACGGCATAGAAGCCCTAGTCCAATGGCTTCTTCTAACCTCATGTCAAATATTTCTGGCACAG
GTTTTGGCGGTTGGAATGGACTTCCTGACGAGACAAGATTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAG
AGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCAAATTTCAATTTTGTTGGGCGGCTTCTTGGACCTAGAGGCAATTCTCTGAAACGTGTTGAAGCGACGACAGG
GTGTCGTGTGTATATAAGAGGAAATGGCTCAATCAAGGATCCAGAAAAGGAAGAGAAACTCCGAGGCAGACTTGGCTATGAACATCTAAACGAACCGCTGCATGTTCTAA
TTGAAGCTGATTTACCAGCCAATATCATTGATATCAGGCTGAGACAGGCACAAGAAATTATTGAAGAACTACTCAAACCAGTGGACGAGCCGAACGATTTTATCAAACGA
CAACAATTGCGCGAATTGGCGATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGTCCGAGTGGTGGCAGTGTTTCTCCTTTCAACTCAAGTGGGATGAAGCGTGCAAA
AACTGGCCGCTGA
Protein sequenceShow/hide protein sequence
MSGLYNPNFSPARAASPQIGTTTDTDSQYLSELLILRVSGMMSNQGFSDLERLRHRSPSPMASSNLMSNISGTGFGGWNGLPDETRLSGNPGMTMDWQGAPASPSSFTVK
RILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGNGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDFIKR
QQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTGR