CuGenDBv2

Gene ID	Sed0017709
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG08:30557958..30560361
RNA-Seq Expression	Sed0017709
Synteny	Sed0017709
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143251.1 uncharacterized protein LOC111013161 [Momordica charantia]

4.5e-40

60.29

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Query:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRSP-----TNRPANRGRNQVGESSTAPS-----PPKNLVMGQVKILKRGE
        LVLS PLKS+RNS PN             SSS+NPNFNH+    S  RRRRSP     +NR ANRGR++ GE STAPS      PK LVMGQVKILKRGE
Subjt:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRSP-----TNRPANRGRNQVGESSTAPS-----PPKNLVMGQVKILKRGE

Query:  MLSSD---GGVCVGVRGEDL---DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR
        ML+ D   GGV  G R  +L   D+DL LGSTDR GPDP+LMQKQVV +E K  + G YAGS AF ASPPPS VPLP FL  NG+     ATS+LRRLLR
Subjt:  MLSSD---GGVCVGVRGEDL---DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR

Query:  LDLD
        LDLD
Subjt:  LDLD

XP_022937911.1 uncharacterized protein LOC111444161 [Cucurbita moschata]

1.1e-41

62.44

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Query:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD
        LVLS  PLKS+RN          SN  SSSSSS+NPNFN +DAT SGRRR        NR  NRGR++V E+STA    PKNLVMGQVKILKRGEML  D
Subjt:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD

Query:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD
        GGV  G    +  +  DLDLVLGSTDR GPDP+LMQKQVV +E K  + G YAGS AF ASPPPS VPLP FL KNG+     AT++LRRLLRLDLD
Subjt:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD

XP_022965945.1 uncharacterized protein LOC111465671 [Cucurbita maxima]

1.4e-41

62.44

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Query:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD
        LVLS  PLKS+RN          SN  SSSSSS+NPNFN +DAT SGRRR        NR  NRGR++V E+STA    PKNLVMGQVKILKRGEML  D
Subjt:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD

Query:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD
        GGV  G    +  +  DLDLVLGSTDR GPDP+LMQKQVV +E K  + G YAGS AF ASPPPS VPLP FL KNG+     AT++LRRLLRLDLD
Subjt:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD

XP_023537567.1 uncharacterized protein LOC111798562 [Cucurbita pepo subsp. pepo]

2.8e-42

62.94

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Query:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD
        LVLS  PLKS+RN          SN  SSSSSS+NPNFN +DAT SGRRR        NR  NRGR++V E+STA    PKNLVMGQVKILKRGEMLS D
Subjt:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD

Query:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD
        GGV  G    +  +  DLDLVLGSTDR GPDP+LMQKQVV +E K  + G YAGS AF ASPPPS VPLP FL KNG+     AT++LRRLLRLDLD
Subjt:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD

XP_038890387.1 uncharacterized protein LOC120079968 [Benincasa hispida]

1.1e-41

58.94

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Query:  KSYLNDCLVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS----PTNRPANRGRNQVGESST-APSPPKNLVMGQVKILKR
        K + +  LVLS PLKS+RNSNP           SS+SSS+NPNFNH+D T SGRRRR +      NR  NRGR++  E ST A    KNL+MGQVKILKR
Subjt:  KSYLNDCLVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS----PTNRPANRGRNQVGESST-APSPPKNLVMGQVKILKR

Query:  GEMLSSDGGVCVG--------VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLR
        GE L+ D GV  G        +  +  D+DLVLGSTDR GPDP+LMQKQVVLTEFK  + G YAGS AF ASPPPS VPLP FL KNG+     ATS+LR
Subjt:  GEMLSSDGGVCVG--------VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLR

Query:  RLLRLDL
        RLLRLDL
Subjt:  RLLRLDL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C5D8 uncharacterized protein LOC103496651

1.4e-39

58.33

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Query:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS----PTNRPANRGRNQVGESS-TAPSPPKNLVMGQVKILKRGEMLSSD
        LVLS PL S+RNSNPN           S+S+SSNPNFNH+D + SGRRRR +      NR ANR R++V ESS TA    K+LVMGQVKILKRGE+L+  
Subjt:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS----PTNRPANRGRNQVGESS-TAPSPPKNLVMGQVKILKRGEMLSSD

Query:  GGVCVGVRGEDL-----------DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR
         GV  G  G D            ++DLVLGSTDR GPDP+LMQKQVVLTEFK    G YAGS AF ASPPPS VPLP F+ KNG      AT++LRRLLR
Subjt:  GGVCVGVRGEDL-----------DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR

Query:  LDLD
        LDL+
Subjt:  LDLD

A0A5A7VCB7 Uncharacterized protein

1.4e-39

58.33

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Query:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS----PTNRPANRGRNQVGESS-TAPSPPKNLVMGQVKILKRGEMLSSD
        LVLS PL S+RNSNPN           S+S+SSNPNFNH+D + SGRRRR +      NR ANR R++V ESS TA    K+LVMGQVKILKRGE+L+  
Subjt:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS----PTNRPANRGRNQVGESS-TAPSPPKNLVMGQVKILKRGEMLSSD

Query:  GGVCVGVRGEDL-----------DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR
         GV  G  G D            ++DLVLGSTDR GPDP+LMQKQVVLTEFK    G YAGS AF ASPPPS VPLP F+ KNG      AT++LRRLLR
Subjt:  GGVCVGVRGEDL-----------DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR

Query:  LDLD
        LDL+
Subjt:  LDLD

A0A6J1CPP9 uncharacterized protein LOC111013161

2.2e-40

60.29

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Query:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRSP-----TNRPANRGRNQVGESSTAPS-----PPKNLVMGQVKILKRGE
        LVLS PLKS+RNS PN             SSS+NPNFNH+    S  RRRRSP     +NR ANRGR++ GE STAPS      PK LVMGQVKILKRGE
Subjt:  LVLS-PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRSP-----TNRPANRGRNQVGESSTAPS-----PPKNLVMGQVKILKRGE

Query:  MLSSD---GGVCVGVRGEDL---DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR
        ML+ D   GGV  G R  +L   D+DL LGSTDR GPDP+LMQKQVV +E K  + G YAGS AF ASPPPS VPLP FL  NG+     ATS+LRRLLR
Subjt:  MLSSD---GGVCVGVRGEDL---DLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLR

Query:  LDLD
        LDLD
Subjt:  LDLD

A0A6J1FBP4 uncharacterized protein LOC111444161

5.2e-42

62.44

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Query:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD
        LVLS  PLKS+RN          SN  SSSSSS+NPNFN +DAT SGRRR        NR  NRGR++V E+STA    PKNLVMGQVKILKRGEML  D
Subjt:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD

Query:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD
        GGV  G    +  +  DLDLVLGSTDR GPDP+LMQKQVV +E K  + G YAGS AF ASPPPS VPLP FL KNG+     AT++LRRLLRLDLD
Subjt:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD

A0A6J1HQ64 uncharacterized protein LOC111465671

6.8e-42

62.44

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Query:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD
        LVLS  PLKS+RN          SN  SSSSSS+NPNFN +DAT SGRRR        NR  NRGR++V E+STA    PKNLVMGQVKILKRGEML  D
Subjt:  LVLS--PLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRS---PTNRPANRGRNQVGESSTAPS-PPKNLVMGQVKILKRGEMLSSD

Query:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD
        GGV  G    +  +  DLDLVLGSTDR GPDP+LMQKQVV +E K  + G YAGS AF ASPPPS VPLP FL KNG+     AT++LRRLLRLDLD
Subjt:  GGVCVG----VRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02040.1 unknown protein

7.2e-12

33.77

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Query:  SSSSSNPNFNHEDATFSGRRRRRSPTNRPANRGRNQVGESSTAPSPPKNLVMGQVKILKRGEMLSSDGGVCVGVRGEDL---------DLDLVLGSTDRF
        S SS N  F H+       + R    +  A R R Q      +P+   NLVM QVKILKRGE LS+       +  +D          D+DL++ +T+R 
Subjt:  SSSSSNPNFNHEDATFSGRRRRRSPTNRPANRGRNQVGESSTAPSPPKNLVMGQVKILKRGEMLSSDGGVCVGVRGEDL---------DLDLVLGSTDRF

Query:  GPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSI
        GP+PE++ KQ+     +     ++AG+   + SPPPS VP+P FL    ++
Subjt:  GPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSI

AT4G32020.1 unknown protein

3.4e-09

32.79

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Query:  NPNSSSSSSSNPNF--NHEDATFSGRRRRRSPTNRPANRGRNQ----------------VGESSTAPSPPKNLVMGQVKILKRGEMLSSDGGVCVGVRGE
        +P S      NP+   N +  T S  R RRSP    ++R  +                 V + +   S    + + QV+ILKRGE +  +          
Subjt:  NPNSSSSSSSNPNF--NHEDATFSGRRRRRSPTNRPANRGRNQ----------------VGESSTAPSPPKNLVMGQVKILKRGEMLSSDGGVCVGVRGE

Query:  DLDLDLV-LGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDL
        DL +++  LGST R GPDP L+  Q+ L+  K  +   YAG    + SPPPS VPLP F  K        AT++L R+LRLD+
Subjt:  DLDLDLV-LGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDL

Sequences

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CDS sequence

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ATGGAGAATTGTATCAAAAACTCAAACTCGTTTGGGTATAGTTTTTTTATAGAAGAGTTAGAGTCAAAATCTTATTTGAATGACTGCCTTGTTCTATCTCCTCTGAAATC
GCAGCGAAATTCTAACCCTAATTCTAGTTCTAGTTTTTCATCAAACCCTAATTCTAGTTCTAGTTCTTCCTCAAACCCTAATTTTAATCATGAAGATGCAACATTTTCCG
GCAGGCGGCGGAGGAGGAGCCCGACCAACCGCCCAGCAAATAGAGGAAGGAATCAGGTGGGAGAGTCGTCCACGGCGCCATCGCCGCCGAAGAATCTGGTTATGGGACAG
GTCAAGATCCTGAAGCGTGGGGAGATGTTGAGTTCCGATGGAGGAGTTTGCGTTGGTGTTCGTGGTGAGGATTTGGATTTGGATTTGGTTTTAGGGTCAACTGATCGGTT
TGGTCCTGACCCTGAATTGATGCAGAAGCAGGTTGTGCTTACGGAATTCAAGCCTCCCAATGGAGGCACCTATGCTGGATCGGCTGCGTTCATCGCTTCGCCGCCACCGA
GTTTGGTGCCTTTGCCGCTGTTTTTAGATAAGAATGGAAGCATTGCCACGAGCTGTGCCACGAGCAATCTACGGCGGTTGCTTCGACTTGATTTGGACTGA

mRNA sequence

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Protein sequence

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MENCIKNSNSFGYSFFIEELESKSYLNDCLVLSPLKSQRNSNPNSSSSFSSNPNSSSSSSSNPNFNHEDATFSGRRRRRSPTNRPANRGRNQVGESSTAPSPPKNLVMGQ
VKILKRGEMLSSDGGVCVGVRGEDLDLDLVLGSTDRFGPDPELMQKQVVLTEFKPPNGGTYAGSAAFIASPPPSLVPLPLFLDKNGSIATSCATSNLRRLLRLDLD

Sed0017709 (gene) of Chayote v1 genome