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Sed0017732 (gene) of Chayote v1 genome

Gene IDSed0017732
OrganismSechium edule (Chayote v1)
DescriptionPlant transposase
Genome locationLG12:24777387..24781344
RNA-Seq ExpressionSed0017732
SyntenySed0017732
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]4.4e-2731.2Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR+A+R++ V EEV++ +EEN ENV   E   K+P  KKTRG +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------
        QPIGE S+GLSSFLG+L                                                                                   
Subjt:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL
                                                                                             + S+ + DDA+S+VL
Subjt:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR
        GPD+ ++RGLGFG+T SK+  S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK +
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR

KAA0042856.1 Plant transposase [Cucumis melo var. makuwa]1.3e-2631.48Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR  +R++ V EEV++ +EEN ENV   E   K+P  KKTRG +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL--------------------EMTSH----------------------------------------------------------
        QPIGE S+GLSSFLG+L                    E+  H                                                          
Subjt:  QPIGEASIGLSSFLGSL--------------------EMTSH----------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------STIVADDALSKVL
                                                                                               S+ + DDA+S+VL
Subjt:  ---------------------------------------------------------------------------------------STIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR
        GPD+ ++RGLGFG+T SK+  S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK +
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR

KAA0051001.1 Plant transposase [Cucumis melo var. makuwa]1.1e-2531.37Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR+A+R++ V EEV++ +EEN ENV   E   K+P  KKTRG +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------
        QPIGE S+GLSSFLG+L                                                                                   
Subjt:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------

Query:  ----------------------------EMTSH------------------------------------------------------STIVADDALSKVL
                                       SH                                                      S+ + DDA+S+VL
Subjt:  ----------------------------EMTSH------------------------------------------------------STIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        GPD+ ++RGLGF +T SK+  S  KDKTI SLE KC+NLT DV+ LK VV+SLLKDK
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]2.4e-2530.36Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENVV--EKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR+A+R++ V EEV++ +EEN ENV   E    +P  KKTR  +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENVV--EKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------
        QPIGE S+GLSSFLG+L                                                                                   
Subjt:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL
                                                                                             + S+ + DDA+S+VL
Subjt:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR
        GPD+ ++RGLGFG+T SK+  S  KDKTI SLE KC+NLTSDV+ LK VV+S LKDK +
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR

TYK28558.1 Plant transposase [Cucumis melo var. makuwa]7.8e-2441.48Show/hide
Query:  MQTIAVEPEMRLDINFNAYGQPIGEASIGLSSFLGSL--------------------------------------------------------------E
        MQTIA+EPEM+LDI +  YGQPIGE  +GLSSFLG+L                                                               
Subjt:  MQTIAVEPEMRLDINFNAYGQPIGEASIGLSSFLGSL--------------------------------------------------------------E

Query:  MTSHSTIVADDALSKVLGPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR
          + S+ + DDA+S+VLG D+G++RGLGFG+T SK+  S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK +
Subjt:  MTSHSTIVADDALSKVLGPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase2.1e-2731.2Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR+A+R++ V EEV++ +EEN ENV   E   K+P  KKTRG +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------
        QPIGE S+GLSSFLG+L                                                                                   
Subjt:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL
                                                                                             + S+ + DDA+S+VL
Subjt:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR
        GPD+ ++RGLGFG+T SK+  S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK +
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR

A0A5A7TLJ2 Plant transposase6.2e-2731.48Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR  +R++ V EEV++ +EEN ENV   E   K+P  KKTRG +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL--------------------EMTSH----------------------------------------------------------
        QPIGE S+GLSSFLG+L                    E+  H                                                          
Subjt:  QPIGEASIGLSSFLGSL--------------------EMTSH----------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------STIVADDALSKVL
                                                                                               S+ + DDA+S+VL
Subjt:  ---------------------------------------------------------------------------------------STIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR
        GPD+ ++RGLGFG+T SK+  S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK +
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR

A0A5A7UBP2 Plant transposase5.2e-2631.37Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR+A+R++ V EEV++ +EEN ENV   E   K+P  KKTRG +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENV--VEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------
        QPIGE S+GLSSFLG+L                                                                                   
Subjt:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------

Query:  ----------------------------EMTSH------------------------------------------------------STIVADDALSKVL
                                       SH                                                      S+ + DDA+S+VL
Subjt:  ----------------------------EMTSH------------------------------------------------------STIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        GPD+ ++RGLGF +T SK+  S  KDKTI SLE KC+NLT DV+ LK VV+SLLKDK
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

A0A5A7UVF2 Plant transposase1.2e-2530.36Show/hide
Query:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENVV--EKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG
        P++    LP  ++   +   SR+P N PLDSPA RTR+A+R++ V EEV++ +EEN ENV   E    +P  KKTR  +KMQTIA+EPEM+LDI +N YG
Subjt:  PQQPVVELP--NLKGPVESSSRQPIN-PLDSPAARTRAAIRRMTVIEEVQNPIEENIENVV--EKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYG

Query:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------
        QPIGE S+GLSSFLG+L                                                                                   
Subjt:  QPIGEASIGLSSFLGSL-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL
                                                                                             + S+ + DDA+S+VL
Subjt:  ----------------------------------------------------------------------------------EMTSHSTIVADDALSKVL

Query:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR
        GPD+ ++RGLGFG+T SK+  S  KDKTI SLE KC+NLTSDV+ LK VV+S LKDK +
Subjt:  GPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPR

A0A5D3CSN9 Uncharacterized protein6.4e-2432.57Show/hide
Query:  QKRVVKRKIMDEFDNVEPNTERRVEMTPISSNPHHHNNLISQPITLSHSPQQPVVELPNLKGPVESSSRQPINPLDSPAARTRAAIRRMTVIEEVQNPIE
        +KR  +RK++   D++    E  +E +PI  +P+          TLS  P   +VE              PI  LDSPAARTR AIRR       +  +E
Subjt:  QKRVVKRKIMDEFDNVEPNTERRVEMTPISSNPHHHNNLISQPITLSHSPQQPVVELPNLKGPVESSSRQPINPLDSPAARTRAAIRRMTVIEEVQNPIE

Query:  ENIENVV------------EKSIKKPKI------------KKTRGCSKMQTIAVEPEMRLDINFNAYGQPIGEASIGLSSFLGSL---------------
        +++E+ +            EK+++   +            KKTRG +KM+TIAVE + R+DI FN YGQPIG  S+GL+SFLG L               
Subjt:  ENIENVV------------EKSIKKPKI------------KKTRGCSKMQTIAVEPEMRLDINFNAYGQPIGEASIGLSSFLGSL---------------

Query:  ---------------------EMTSHSTIVADDALSKVLGPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPRQL
                             E T  +T V DDALSKVLGPDRGH+RG GFG+T+SKL + + +D     LE +   +  ++  +K +   +++ K   L
Subjt:  ---------------------EMTSHSTIVADDALSKVLGPDRGHIRGLGFGMTKSKLFISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDKPRQL

Query:  GCVR
          ++
Subjt:  GCVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAGGGCGAAGAACCATCTATTCAGCAAAAAAGAGTTGTAAAAAGGAAGATAATGGATGAATTTGATAATGTTGAGCCTAATACAGAGAGAAGGGTTGAGATGAC
ACCAATTTCTTCTAACCCACATCACCATAACAATTTAATCTCTCAACCTATAACTCTATCACACTCCCCACAACAACCTGTAGTTGAACTTCCAAACTTGAAAGGGCCCG
TTGAAAGTTCTAGTAGACAACCGATTAACCCATTGGATTCTCCTGCAGCTCGTACTAGAGCAGCCATTCGTAGGATGACAGTCATTGAAGAGGTTCAAAACCCTATAGAG
GAAAATATAGAAAATGTTGTAGAGAAAAGCATTAAAAAACCAAAGATTAAAAAAACTAGAGGTTGCTCTAAAATGCAAACAATAGCAGTTGAGCCAGAAATGAGATTAGA
TATAAACTTCAATGCATATGGGCAACCTATTGGAGAAGCATCAATTGGATTATCTTCCTTTTTGGGCTCACTTGAAATGACGTCTCATTCAACTATTGTGGCTGATGATG
CATTAAGTAAAGTATTGGGTCCTGATCGTGGTCATATACGAGGATTAGGATTTGGAATGACAAAGTCGAAGTTATTCATATCAACTATAAAAGATAAAACTATTGCATCT
CTTGAAAATAAATGCAATAATTTAACATCGGATGTGAATGTGTTGAAGGAAGTTGTATCATCTTTATTGAAGGACAAGCCTCGACAGCTCGGGTGTGTGCGACATGCAAG
GGGGCTCGGTTGCATGGTGCTGCTCGTGGGGGCTTTTCTCGGTGCAATGGCTTGGCGATGGAGATGGGGCTCGACAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAGGGCGAAGAACCATCTATTCAGCAAAAAAGAGTTGTAAAAAGGAAGATAATGGATGAATTTGATAATGTTGAGCCTAATACAGAGAGAAGGGTTGAGATGAC
ACCAATTTCTTCTAACCCACATCACCATAACAATTTAATCTCTCAACCTATAACTCTATCACACTCCCCACAACAACCTGTAGTTGAACTTCCAAACTTGAAAGGGCCCG
TTGAAAGTTCTAGTAGACAACCGATTAACCCATTGGATTCTCCTGCAGCTCGTACTAGAGCAGCCATTCGTAGGATGACAGTCATTGAAGAGGTTCAAAACCCTATAGAG
GAAAATATAGAAAATGTTGTAGAGAAAAGCATTAAAAAACCAAAGATTAAAAAAACTAGAGGTTGCTCTAAAATGCAAACAATAGCAGTTGAGCCAGAAATGAGATTAGA
TATAAACTTCAATGCATATGGGCAACCTATTGGAGAAGCATCAATTGGATTATCTTCCTTTTTGGGCTCACTTGAAATGACGTCTCATTCAACTATTGTGGCTGATGATG
CATTAAGTAAAGTATTGGGTCCTGATCGTGGTCATATACGAGGATTAGGATTTGGAATGACAAAGTCGAAGTTATTCATATCAACTATAAAAGATAAAACTATTGCATCT
CTTGAAAATAAATGCAATAATTTAACATCGGATGTGAATGTGTTGAAGGAAGTTGTATCATCTTTATTGAAGGACAAGCCTCGACAGCTCGGGTGTGTGCGACATGCAAG
GGGGCTCGGTTGCATGGTGCTGCTCGTGGGGGCTTTTCTCGGTGCAATGGCTTGGCGATGGAGATGGGGCTCGACAAGGTGA
Protein sequenceShow/hide protein sequence
MSEGEEPSIQQKRVVKRKIMDEFDNVEPNTERRVEMTPISSNPHHHNNLISQPITLSHSPQQPVVELPNLKGPVESSSRQPINPLDSPAARTRAAIRRMTVIEEVQNPIE
ENIENVVEKSIKKPKIKKTRGCSKMQTIAVEPEMRLDINFNAYGQPIGEASIGLSSFLGSLEMTSHSTIVADDALSKVLGPDRGHIRGLGFGMTKSKLFISTIKDKTIAS
LENKCNNLTSDVNVLKEVVSSLLKDKPRQLGCVRHARGLGCMVLLVGAFLGAMAWRWRWGSTR