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Sed0017750 (gene) of Chayote v1 genome

Gene IDSed0017750
OrganismSechium edule (Chayote v1)
Descriptionprotein FAM32A
Genome locationLG06:46278635..46279599
RNA-Seq ExpressionSed0017750
SyntenySed0017750
Gene Ontology termsGO:0016126 - sterol biosynthetic process (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (molecular function)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068186.1 protein FAM32A [Cucumis melo var. makuwa]1.2e-3379.44Show/hide
Query:  MMFVNVESFLVVNAGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD
        MM   V S LVVN GGS+   E  SD NEE  EI+E N KSTE+GK PHYDDHLTPAERRYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD
Subjt:  MMFVNVESFLVVNAGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD

Query:  IPKVGPG
        IPKVGPG
Subjt:  IPKVGPG

XP_022152607.1 protein FAM32A [Momordica charantia]2.1e-3587.91Show/hide
Query:  AGGSSEISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        +G S+E+ SDVNEEE EID+ N KSTEDGKAPHYDDHLTPAERRYI+QKE IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Subjt:  AGGSSEISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

XP_022956102.1 protein FAM32A [Cucurbita moschata]1.3e-3285.11Show/hide
Query:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        AGGS+   EI  D NEEE EIDE N KSTEDGK PHYDDHLTPAE+RYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Subjt:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

XP_022980751.1 protein FAM32A-like [Cucurbita maxima]6.4e-3282.98Show/hide
Query:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        AGGS+   E+  D NEE+ EIDE N KSTEDGK PHYDDHLTPAE+RYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Subjt:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

XP_023527034.1 protein FAM32A [Cucurbita pepo subsp. pepo]2.9e-3284.04Show/hide
Query:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        AGGS+   E+  D NEEE EIDE N KSTEDGK PHYDDHLTPAE+RYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Subjt:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

TrEMBL top hitse value%identityAlignment
A0A0A0LE92 Uncharacterized protein1.5e-3480.37Show/hide
Query:  MMFVNVESFLVVNAGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD
        MM   V S LVVN GGS+   E  SD NEE  EIDE N KSTE+GK PHYDDHLTPAERRYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD
Subjt:  MMFVNVESFLVVNAGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD

Query:  IPKVGPG
        IPKVGPG
Subjt:  IPKVGPG

A0A5D3DC76 Protein FAM32A5.6e-3479.44Show/hide
Query:  MMFVNVESFLVVNAGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD
        MM   V S LVVN GGS+   E  SD NEE  EI+E N KSTE+GK PHYDDHLTPAERRYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD
Subjt:  MMFVNVESFLVVNAGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYD

Query:  IPKVGPG
        IPKVGPG
Subjt:  IPKVGPG

A0A6J1DGQ7 protein FAM32A1.0e-3587.91Show/hide
Query:  AGGSSEISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        +G S+E+ SDVNEEE EID+ N KSTEDGKAPHYDDHLTPAERRYI+QKE IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Subjt:  AGGSSEISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

A0A6J1GVE6 protein FAM32A6.2e-3385.11Show/hide
Query:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        AGGS+   EI  D NEEE EIDE N KSTEDGK PHYDDHLTPAE+RYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Subjt:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

A0A6J1IS50 protein FAM32A-like3.1e-3282.98Show/hide
Query:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        AGGS+   E+  D NEE+ EIDE N KSTEDGK PHYDDHLTPAE+RYI+QKE+IDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Subjt:  AGGSS---EISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

SwissProt top hitse value%identityAlignment
A6QR31 Protein FAM32A1.6e-0634.41Show/hide
Query:  VVNAGGSSEISSDVNEEEAEIDE--GNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV
        V   G +       ++++A++ E  G  K  E+ K    D   TPA+  + + +E+  + R+ KKA+K+H+ R++DFN++L  ++EHYDIPKV
Subjt:  VVNAGGSSEISSDVNEEEAEIDE--GNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV

B0JZ89 Protein FAM32A1.3e-0843.28Show/hide
Query:  NKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV
        +KK+ E+ K P  D   TPA+  + + +E+  + R+ KKA+K+H+ R++DFN++L  ++EHYDIPKV
Subjt:  NKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV

B2RYG1 Protein FAM32A2.5e-0741.18Show/hide
Query:  GNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV
        G  K  E+ K    D   TPA+  + + +E+  + R+ KKA+K+H+ R++DFN++L  ++EHYDIPKV
Subjt:  GNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV

Q6GQN4 Protein FAM32A-like2.5e-0739.74Show/hide
Query:  NEEEAEIDEGNKKS-TEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV
        N+E   ++E    S  E+G    Y D  TPA+  + + +E+  + R+ KKA+K+H+ R++DFN++L  ++EHYDIPKV
Subjt:  NEEEAEIDEGNKKS-TEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV

Q9CR80 Protein FAM32A1.9e-0741.18Show/hide
Query:  GNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV
        G  K +E+ K    D   TPA+  + + +E+  + R+ KKA+K+H+ R++DFN++L  ++EHYDIPKV
Subjt:  GNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKV

Arabidopsis top hitse value%identityAlignment
AT1G16810.1 unknown protein1.2e-2362.11Show/hide
Query:  GGSSEISSDVNEEEAEIDEGNK--KSTEDGKAPHY---DDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        G S+E    + E E   +E N+  K++ED K       DDHLTPAERRYI+QK+++DV +LAK+ANKSHR+RI+DFNQYLANMSEHYDIPKVGPG
Subjt:  GGSSEISSDVNEEEAEIDEGNK--KSTEDGKAPHY---DDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG

AT1G16810.2 unknown protein1.2e-2362.11Show/hide
Query:  GGSSEISSDVNEEEAEIDEGNK--KSTEDGKAPHY---DDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG
        G S+E    + E E   +E N+  K++ED K       DDHLTPAERRYI+QK+++DV +LAK+ANKSHR+RI+DFNQYLANMSEHYDIPKVGPG
Subjt:  GGSSEISSDVNEEEAEIDEGNK--KSTEDGKAPHY---DDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGTTTGTAAATGTAGAATCTTTTTTGGTGGTAAATGCAGGTGGAAGTAGTGAAATATCAAGTGATGTGAATGAGGAAGAGGCAGAAATAGATGAAGGGAACAA
GAAGTCAACTGAAGATGGGAAGGCTCCTCATTATGATGATCATCTAACACCAGCTGAAAGGCGTTATATTCAGCAGAAGGAGCAAATCGATGTTCATAGACTGGCCAAGA
AAGCTAATAAATCTCATCGTGATCGCATCCAGGATTTTAACCAATATCTGGCCAACATGAGTGAGCATTACGACATTCCCAAAGTTGGCCCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ACAACCATCCTTTTCAAGAGACCAAAGTCATTTATCTCTATCAACATTCAAAATAGTATCATCAAGCTTGTTAGACAATAAAACGCATTCCTCAATCTCAATATCAGTGA
ACAGTCTTCTGAAAGAAAGATCCAATGCCAATGATTCATGGCTCAAGAAGTGTTTATAGGCTACAACTTTCTTAATGATAGTTGATATAAGTGAGGGTGTAGATCCATTA
GTTTCCAATCCAAAGAAATTTGACCTAACAAATAATTACAAAATGACTTATGTCATCAAAACCTAGAAAGAAACATAAAATTTAATATGGAACTACACACCCTTCTGAGA
TCTCTCAGTCCCTCGATTTTTTTCAAATTGTTTTATATTATTACCTCCACCTGATCTCAAAAATCATGCCTAGACTAGAGTGTTTAGAATTTATTCTTGATTTGCAGAAC
TATCATACTGTTAATGGAAATGAATGGTTTGCTATGAAAAAAGCAACCTCAAGTCTCAAGTAGATCCACACTCATGAACAATAGCAGTAGCACGACTAGTTTAAGTATAA
TGTCTTTAACCAAATCCTCACCTCCACTAGTTAAAGCCTTGAGCAGATTTTCACAGTTTTCCATTTTTTTTTTGTTAATTTCAAATTGTTTATTGAGATGATGATGTTTG
TAAATGTAGAATCTTTTTTGGTGGTAAATGCAGGTGGAAGTAGTGAAATATCAAGTGATGTGAATGAGGAAGAGGCAGAAATAGATGAAGGGAACAAGAAGTCAACTGAA
GATGGGAAGGCTCCTCATTATGATGATCATCTAACACCAGCTGAAAGGCGTTATATTCAGCAGAAGGAGCAAATCGATGTTCATAGACTGGCCAAGAAAGCTAATAAATC
TCATCGTGATCGCATCCAGGATTTTAACCAATATCTGGCCAACATGAGTGAGCATTACGACATTCCCAAAGTTGGCCCTGGCTGA
Protein sequenceShow/hide protein sequence
MMMFVNVESFLVVNAGGSSEISSDVNEEEAEIDEGNKKSTEDGKAPHYDDHLTPAERRYIQQKEQIDVHRLAKKANKSHRDRIQDFNQYLANMSEHYDIPKVGPG