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Sed0017757 (gene) of Chayote v1 genome

Gene IDSed0017757
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:6631280..6631762
RNA-Seq ExpressionSed0017757
SyntenySed0017757
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036273.1 hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa]1.9e-1981.08Show/hide
Query:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRRED--SVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
        MSSMGASCARVYVMKKKAEEKL+RMEQ+RSGRRED  SVKP K A H GG +AGKSS KVHPGT FG P TSNS
Subjt:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRRED--SVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
KAG6594855.1 hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1468.06Show/hide
Query:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
        MSS+GASCARVYVMKKK EEKL+RMEQ+++GRRED VKPSK  AHHGG+ AG +  KVHPGT    P ++ S
Subjt:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
KAG6604014.1 hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1568.49Show/hide
Query:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHH-GGSVAGKSSNKVHPGTGFGAPGTSNS
        MSSMGA+CARVYVM+KK EEKLKRMEQ+R+GR ED+VKP K A HH GG +AGK+  KVHPG  F     SNS
Subjt:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHH-GGSVAGKSSNKVHPGTGFGAPGTSNS
KGN48780.1 hypothetical protein Csa_002943 [Cucumis sativus]5.6e-1979.17Show/hide
Query:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
        MSSMGASCARVYVMKKKAEEKL+RMEQ+RSGRREDSVKP K + H  G +AGKSS KVHPGT FG   TSNS
Subjt:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
TrEMBL top hitse value%identityAlignment
A0A0A0KGB8 Uncharacterized protein2.7e-1979.17Show/hide
Query:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
        MSSMGASCARVYVMKKKAEEKL+RMEQ+RSGRREDSVKP K + H  G +AGKSS KVHPGT FG   TSNS
Subjt:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
A0A2N9EUS9 Uncharacterized protein6.4e-0555.74Show/hide
Query:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPG
        MSS+GASCA +YVM+K+ +EKLKRME++R  + E SV+ SK +    GS  G+ S KVHPG
Subjt:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPG
A0A5A7T065 Uncharacterized protein9.2e-2081.08Show/hide
Query:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRRED--SVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
        MSSMGASCARVYVMKKKAEEKL+RMEQ+RSGRRED  SVKP K A H GG +AGKSS KVHPGT FG P TSNS
Subjt:  MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRRED--SVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCATGGGAGCAAGCTGCGCTAGGGTTTACGTAATGAAAAAGAAGGCCGAGGAGAAACTCAAGAGGATGGAACAGGACAGATCTGGCAGAAGGGAAGACTCGGT
CAAACCTTCTAAACCCGCCGCCCATCACGGCGGCTCCGTCGCCGGCAAATCAAGTAATAAAGTCCATCCCGGTACCGGATTTGGAGCTCCGGGGACCTCTAATTCCTGA
mRNA sequenceShow/hide mRNA sequence
ACAGAAAAGAAACAATTGTGATATTAAATCATTTCGATTTGGTGGGTAAAAATCGTGATGTCGTCCATGGGAGCAAGCTGCGCTAGGGTTTACGTAATGAAAAAGAAGGC
CGAGGAGAAACTCAAGAGGATGGAACAGGACAGATCTGGCAGAAGGGAAGACTCGGTCAAACCTTCTAAACCCGCCGCCCATCACGGCGGCTCCGTCGCCGGCAAATCAA
GTAATAAAGTCCATCCCGGTACCGGATTTGGAGCTCCGGGGACCTCTAATTCCTGAAAAACAGAGCTCAGCTCTCTGGCTTTTAGTATCTGAACTGTGTAATTCTATTGC
CAGAGTCGCAGTTTTTATTAGTGTCTTCTTTTTTTTGTTTCTTTCTTTATCTGCCTTGGCTTATAGATTTGTGTAAAGTTTTTTTTAAAGAAAATTTCAGAAATGAAACA
AAGAAAGTGAAAATTATGGATTTTTTTTCTTTCCTTATCTCCA
Protein sequenceShow/hide protein sequence
MSSMGASCARVYVMKKKAEEKLKRMEQDRSGRREDSVKPSKPAAHHGGSVAGKSSNKVHPGTGFGAPGTSNS