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Sed0017764 (gene) of Chayote v1 genome

Gene IDSed0017764
OrganismSechium edule (Chayote v1)
Description39S ribosomal protein L41-A, mitochondrial-like
Genome locationLG05:29639122..29642027
RNA-Seq ExpressionSed0017764
SyntenySed0017764
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608261.1 39S ribosomal protein L41-A, mitochondrial-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3894.38Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE    SEAG
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]3.0e-3894.32Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEA
        MALGLILGLGR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP E VK SEA
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEA

XP_022940505.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita moschata]6.6e-3894.38Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQC IE  K SEAG
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]6.0e-3995.51Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE  K SEAG
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]2.3e-3898.78Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV
        MALGLILGLGR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein1.6e-3796.34Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like1.6e-3796.34Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDL+DFKLKPYVSQCPIE+
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial1.4e-3894.32Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEA
        MALGLILGLGR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFKLKPYVSQCP E VK SEA
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEA

A0A6J1FQT8 39S ribosomal protein L41-A, mitochondrial-like3.2e-3894.38Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQC IE  K SEAG
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like2.9e-3995.51Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG
        MALGLILGL RSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIE  K SEAG
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial4.3e-0851.92Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6DJI4 39S ribosomal protein L41-A, mitochondrial1.5e-0844.59Show/hide
Query:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial2.5e-0844.59Show/hide
Query:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FKLKPYVS
Subjt:  LGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial6.3e-0751.85Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDLT FKLKPYVS
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Q9CQN7 39S ribosomal protein L41, mitochondrial4.3e-0850Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FKLKPYV+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L271.6e-3477.27Show/hide
Query:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEA
        M LGL+ G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNYVVPDLT FKLKPYVSQCP++V K +E+
Subjt:  MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEA

AT5G39800.1 Mitochondrial ribosomal protein L272.3e-3686.08Show/hide
Query:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV
        GL++G+GRS RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCPI+V
Subjt:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV

AT5G40080.1 Mitochondrial ribosomal protein L275.0e-3684.81Show/hide
Query:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV
        GL++G+GRS RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FKLKPYVSQCP++V
Subjt:  GLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGACTGATACTGGGACTCGGAAGATCAATGCGGCGGAAGCGCACATCATCTCTGGATATTCTCTCGTCCAAACGAGCTCCACGAGATTACTACAAGGGCAA
GAATTGCAAGCCTACTGGTTTTCACACGCGCAAAGGTGGATATGTAGTCGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTT
ATGTATCTCAATGTCCAATCGAAGTCGTCAAGCCCAGTGAAGCGGGCTAA
mRNA sequenceShow/hide mRNA sequence
TGGCAGCCGAAGAAAATTCAGGGTTGTTTCGTCTTCGAAATCTCTCGAGAAATGGCGTTGGGACTGATACTGGGACTCGGAAGATCAATGCGGCGGAAGCGCACATCATC
TCTGGATATTCTCTCGTCCAAACGAGCTCCACGAGATTACTACAAGGGCAAGAATTGCAAGCCTACTGGTTTTCACACGCGCAAAGGTGGATATGTAGTCGTGCCAGAGA
AACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGTCCAATCGAAGTCGTCAAGCCCAGTGAAGCGGGCTAATTCATAGTG
GCTTGATGTTGATTATAGGTGATTAGCCTAATCAGATTAGGTCTAGATGGAGGCCGCAAATTTTAGCCATTTCGTACACTTGAAATCGAGGAGATAATGTATAAACCCCT
GCCTCATGAATATAATTTTTTTTTTAATAAATTTGTTTGGTTTTTTGGTTTTTTCTTCTTGGACACAGTTGAAATGCCGTGAGAAGAGAAGGCAACATTGCTTTACTTGA
TGGATGCAACTGCATAATTGTTGAATTAAACCTGCTCCAAATTGTTCATTTCATGTTATGGGATGATTAAGATGGATTTAATTGTAGGTTTCGCTAGGGCATCGAAAAGG
TTTTATTTTTACATGAACATCTTGTTTTAATATATGTTCTAAAATAATTTCAGAAGAAATATGTGATTCTTA
Protein sequenceShow/hide protein sequence
MALGLILGLGRSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVVKPSEAG