| GenBank top hits | e value | %identity | Alignment |
|---|
| QIT04040.1 RNA polymerase beta'' subunit [Luffa aegyptiaca] | 0.0e+00 | 85.57 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDL VTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSC CSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVR KFYGPDL GKNESGI DYSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFIIQF+SLQEREKELP SGISIEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKKNSKKS KLKNWIYVQWITPTKKK
Subjt: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELR VNYILY NGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSI+EAR SFVEVSTNGLV+NFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
DLVK DTSYIRKRKDPSGSGLIFNNE VPQS S+NQGTIRTL RNKERQS IILSASNCLQ+DLFNDVKD NVIKESSKKDPL
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
Query: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDN KQTFQV+KYYLMDENGGILNSDP +NIV NTFNLNWHFL HNYH SYCEETP RISLGQ
Subjt: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
Query: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
FFFENVCIAKNRPHLKSGQIIIV+VDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS+SL+K IE
Subjt: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
Query: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
Subjt: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
Query: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
LGITK SLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK FEGE+RDILFHHKELFDFCIS
Subjt: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
Query: TNLHDTSEQAFLGFNDS
TNLHDTSEQAFLGFNDS
Subjt: TNLHDTSEQAFLGFNDS
|
|
| QIT04123.1 RNA polymerase beta'' subunit [Sechium edule] | 0.0e+00 | 88.37 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------------------------------------------VEIVFLL---
NGFIIQFDSLQEREKELPTTSGISIEIPING F V++ F +
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------------------------------------------VEIVFLL---
Query: -------ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
S+++ I+ RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
Subjt: -------ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSI EARVSFVEVSTNGLVQNFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
DLVKCDTSYIRKRKDPSGSGLIFNNE VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
Query: RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
Subjt: RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
Query: FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE---
FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQK IE
Subjt: FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE---
Query: --------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
Subjt: --------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
Query: ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
Subjt: ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
Query: LHDTSEQAFLGFNDS
LHDTSEQAFLGFNDS
Subjt: LHDTSEQAFLGFNDS
|
|
| QWQ50133.1 RNA polymerase beta'' subunit [Cyclanthera pedata] | 0.0e+00 | 85.9 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQS ILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIY GPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NR ITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVR KFYGP+L GKNESGIL YSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFII+FDSLQEREKELP TSGI IEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: -------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKKYFV
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKK+SKKSKLKNWIYVQWITPTKKKYFV
Subjt: -------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKKYFV
Query: FVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDLV
FVRPVIIYELADGINLVTLFPQDLLQERDNLELR VNYILYENGKPIRGISGTSIQLVRTCLLLNWD+DKKSSSI+EARVSFVEVSTNGLV NFLRIDLV
Subjt: FVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDLV
Query: KCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEIRNS
KCDTSYIRKRKDPSGSGLIFNNE V QS S+NQGTIRTLRNKERQS IILSASNCLQIDLFNDVKD NVIKESSKKDPLEIRNS
Subjt: KCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEIRNS
Query: LGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFEN
GPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNL QTFQVIKYYL+DENGGILNSDPS+NIVLNTFNLNWHFL HNYH SYCEETP RISLGQFFFEN
Subjt: LGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFEN
Query: VCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE------
VCIAKNRPHLKSGQIIIV+VDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSISISLQK IE
Subjt: VCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE------
Query: -----------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
Subjt: -----------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
Query: TSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTNLHD
+LNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE PPKKIFEGEIRDILFHHKELFDF ISTNLHD
Subjt: TSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTNLHD
Query: TSEQAFLGFNDS
T EQAFLGFNDS
Subjt: TSEQAFLGFNDS
|
|
| YP_009751896.1 RNA polymerase beta'' subunit [Cyclanthera pedata] | 0.0e+00 | 85.9 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQS ILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIY GPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NR ITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVR KFYGP+L GKNESGIL YSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFII+FDSLQEREKELP TSGI IEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: -------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKKYFV
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKK+SKKSKLKNWIYVQWITPTKKKYFV
Subjt: -------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKKYFV
Query: FVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDLV
FVRPVIIYELADGINLVTLFPQDLLQERDNLELR VNYILYENGKPIRGISGTSIQLVRTCLLLNWD+DKKSSSI+EARVSFVEVSTNGLV NFLRIDLV
Subjt: FVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDLV
Query: KCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEIRNS
KCDTSYIRKRKDPSGSGLIFNNE V QS S+NQGTIRTLRNKERQS IILSASNCLQIDLFNDVKD NVIKESSKKDPLEIRNS
Subjt: KCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEIRNS
Query: LGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFEN
GPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNL QTFQVIKYYL+DENGGILNSDPS+NIVLNTFNLNWHFL HNYH SYCEETP RISLGQFFFEN
Subjt: LGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFEN
Query: VCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE------
VCIAKNRPHLKSGQIIIV+VDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSISISLQK IE
Subjt: VCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE------
Query: -----------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
Subjt: -----------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
Query: TSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTNLHD
+LNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE PPKKIFEGEIRDILFHHKELFDF ISTNLHD
Subjt: TSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTNLHD
Query: TSEQAFLGFNDS
T EQAFLGFNDS
Subjt: TSEQAFLGFNDS
|
|
| YP_009945407.1 RNA polymerase beta'' subunit [Sechium edule] | 0.0e+00 | 88.44 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------------------------------------------VEIVFLL---
NGFIIQFDSLQEREKELPTTSGISIEIPING F V++ F +
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------------------------------------------VEIVFLL---
Query: -------ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
S+++ I+ RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
Subjt: -------ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
DLVKCDTSYIRKRKDPSGSGLIFNNE VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
Query: RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
Subjt: RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
Query: FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE---
FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQK IE
Subjt: FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE---
Query: --------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
Subjt: --------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
Query: ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
Subjt: ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
Query: LHDTSEQAFLGFNDS
LHDTSEQAFLGFNDS
Subjt: LHDTSEQAFLGFNDS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6H0EPT4 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 85.57 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDL VTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSC CSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVR KFYGPDL GKNESGI DYSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFIIQF+SLQEREKELP SGISIEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKKNSKKS KLKNWIYVQWITPTKKK
Subjt: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELR VNYILY NGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSI+EAR SFVEVSTNGLV+NFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
DLVK DTSYIRKRKDPSGSGLIFNNE VPQS S+NQGTIRTL RNKERQS IILSASNCLQ+DLFNDVKD NVIKESSKKDPL
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
Query: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDN KQTFQV+KYYLMDENGGILNSDP +NIV NTFNLNWHFL HNYH SYCEETP RISLGQ
Subjt: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
Query: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
FFFENVCIAKNRPHLKSGQIIIV+VDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS+SL+K IE
Subjt: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
Query: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
Subjt: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
Query: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
LGITK SLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK FEGE+RDILFHHKELFDFCIS
Subjt: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
Query: TNLHDTSEQAFLGFNDS
TNLHDTSEQAFLGFNDS
Subjt: TNLHDTSEQAFLGFNDS
|
|
| A0A6H0EQ95 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 88.37 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------------------------------------------VEIVFLL---
NGFIIQFDSLQEREKELPTTSGISIEIPING F V++ F +
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------------------------------------------VEIVFLL---
Query: -------ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
S+++ I+ RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
Subjt: -------ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSI EARVSFVEVSTNGLVQNFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
DLVKCDTSYIRKRKDPSGSGLIFNNE VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEI
Query: RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
Subjt: RNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFF
Query: FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE---
FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQK IE
Subjt: FENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE---
Query: --------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
Subjt: --------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLG
Query: ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
Subjt: ITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTN
Query: LHDTSEQAFLGFNDS
LHDTSEQAFLGFNDS
Subjt: LHDTSEQAFLGFNDS
|
|
| A0A6H0ER02 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 85.35 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDL VTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSC CS VPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVR KFYGPDL GKNESGI DYSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFIIQF+SL EREKELP SGISIEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKKNSKKS KLKNWIYVQWITPTKKK
Subjt: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELR VNYILY NGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSI+EAR SFVEVSTNGLV+NFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
DLVK DTSYIRKRKDPSGSGLIFNNE VPQS SKNQGTIRTL RNKERQS IILSASNCLQ+DLFNDVKD NVIKESSKKDPL
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
Query: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
EIRNSLGPLG APQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQV+KYYLMDENGGILNSDP +NIV NTFNLNWHFL HNYH SYCEETP RISLGQ
Subjt: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
Query: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
FFFENVCIAKNRPHLKSGQIIIV+VDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS+SL+K IE
Subjt: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
Query: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRAERTGRALEEAICYRAVL
Subjt: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
Query: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
LGITK SLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK EGE+RDILFHHKELFDFCIS
Subjt: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
Query: TNLHDTSEQAFLGFNDS
TNLHDTSEQAFLGFNDS
Subjt: TNLHDTSEQAFLGFNDS
|
|
| A0A6H0ESQ0 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 85.9 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQS ILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIY GPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NR ITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVR KFYGP+L GKNESGIL YSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFII+FDSLQEREKELP TSGI IEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: -------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKKYFV
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKK+SKKSKLKNWIYVQWITPTKKKYFV
Subjt: -------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKSKLKNWIYVQWITPTKKKYFV
Query: FVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDLV
FVRPVIIYELADGINLVTLFPQDLLQERDNLELR VNYILYENGKPIRGISGTSIQLVRTCLLLNWD+DKKSSSI+EARVSFVEVSTNGLV NFLRIDLV
Subjt: FVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDLV
Query: KCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEIRNS
KCDTSYIRKRKDPSGSGLIFNNE V QS S+NQGTIRTLRNKERQS IILSASNCLQIDLFNDVKD NVIKESSKKDPLEIRNS
Subjt: KCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTLRNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPLEIRNS
Query: LGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFEN
GPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNL QTFQVIKYYL+DENGGILNSDPS+NIVLNTFNLNWHFL HNYH SYCEETP RISLGQFFFEN
Subjt: LGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFEN
Query: VCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE------
VCIAKNRPHLKSGQIIIV+VDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSISISLQK IE
Subjt: VCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE------
Query: -----------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
Subjt: -----------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITK
Query: TSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTNLHD
+LNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLE PPKKIFEGEIRDILFHHKELFDF ISTNLHD
Subjt: TSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCISTNLHD
Query: TSEQAFLGFNDS
T EQAFLGFNDS
Subjt: TSEQAFLGFNDS
|
|
| A0A6H0ESV4 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 85.35 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDL VTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSC CS VPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVR KFYGPDL GKNESGI DYSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFIIQF+SL EREKELP SGISIEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKKNSKKS KLKNWIYVQWITPTKKK
Subjt: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELR VNYILY NGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSI+EAR SFVEVSTNGLV+NFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
DLVK DTSYIRKRKDPSGSGLIFNNE VPQS SKNQGTIRTL RNKERQS IILSASNCLQ+DLFNDVKD NVIKESSKKDPL
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
Query: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
EIRNSLGPLG APQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQV+KYYLMDENGGILNSDP +NIV NTFNLNWHFL HNYH SYCEETP RISLGQ
Subjt: EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQ
Query: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
FFFENVCIAKNRPHLKSGQIIIV+VDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS+SL+K IE
Subjt: FFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-
Query: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRAERTGRALEEAICYRAVL
Subjt: ----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVL
Query: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
LGITK SLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK EGE+RDILFHHKELFDFCIS
Subjt: LGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIS
Query: TNLHDTSEQAFLGFNDS
TNLHDTSEQAFLGFNDS
Subjt: TNLHDTSEQAFLGFNDS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B1A925 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 73.54 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR+TDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NR +PERIFIQTLIGRVLADDIYMGPRCI IRNQDIGIGL+
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITF+TQ ISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEH+R+PSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDLSV IESEDIIHNVTIPPKS LLVQNDQYVESEQVIAEIRAGTYTLN KERVRKHIYS+SEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGS S+VPFSL+KDQDQ+N+HSLSVE+ ISSL+VNND+ RHKF+ + K + GI DYSE + IL TG NL Y A H N DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF----------------------------------------------------------------VEI
N FII F S+QE+EKEL SGISIEIPING F V I
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF----------------------------------------------------------------VEI
Query: VFLLISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKYF
+ S+++ I+ R+TL+IRS+VGGLVRVE+KKK IEL+IFSGDI+FPG+ DKISRH+GILIPP R K NSK+S KLKNWIYVQ ITPTKKKYF
Subjt: VFLLISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKYF
Query: VFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDL
V VRPV YE+ADGINL TLFPQDL +E+DN++LR VNYILY NGKP+RGI TSIQLVRTCL+LNWD+D KSSS++E R FVEVSTN L+++FLRIDL
Subjt: VFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDL
Query: VKCDT--SYIRKRKDPSGSGLIFNN------------EVPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL-EIRN
VK + SYIRKR DPSGSGLI +N + QS SKN GTIRTL RNKE QS IILS+SNC Q+ FN VK NVIK+S KKDPL IRN
Subjt: VKCDT--SYIRKRKDPSGSGLIFNN------------EVPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL-EIRN
Query: SLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFE
SLGP+G A QI NFYS Y LITHN IS+TKY QLDNL Q F+VIKYYLMDE G + N DP +NI+LN FNLNW+FL NYH +YCEET ISLGQF E
Subjt: SLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFFE
Query: NVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-----
NVC+AKN PHLKSGQ++IV+VDSVVIRSAKPYLAT GATVH HYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS++L+K +E
Subjt: NVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE-----
Query: ------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGIT
+G VYRSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVF PGELIGLLRAERTGRALEEAICYRA+LLGIT
Subjt: ------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGIT
Query: KTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK--IFEGEIRDILFHHKELFDFCISTN
+ SLNTQSFISEASFQETARVLAKAALRGRIDWL+GLKENVVLGGMIP GTGF+ L H SRQH +I LET K +FEGE+RDI FHH+ELFD CIS N
Subjt: KTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK--IFEGEIRDILFHHKELFDFCISTN
Query: LHDTSEQAFLGFNDS
LH+TSE++F+G NDS
Subjt: LHDTSEQAFLGFNDS
|
|
| B1NWE0 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 73.43 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKH+HYGNVHAVEKLRQSIEIWYATSEYLRQEMN NFRMT+PFNPVHIMSFSGARGN SQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGT RGISVSP N M+PERIFIQT IGRVLAD+IYMG RCI IRNQDIGIGL
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITF+TQ ISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEH+RAPSNGKIKFNEDLVHP RT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDL VTI+S+DIIHNVTIPPKS LLVQNDQYVESEQVIAEIRAG YTLN KE+VRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSG SC S+VPFSL+KDQDQ+NVHSLSV+RRYISS SVNND+V+HKF+ D GK ESGI DYSELN +CTG NL Y I + N DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPING-------------------------------------------------------------FFVEIVFL
N FII F S+QEREKEL T S ISIEIPING F E V++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPING-------------------------------------------------------------FFVEIVFL
Query: L---ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKYF
L S+++ I+ ++ L+ RSRVGGLVRVE+KKK++ELKIFSGDI+FPGE DKISRH+ ILIPP VK NSK+S K+KNWIY+Q ITPTKKKYF
Subjt: L---ISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKYF
Query: VFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDL
V VRPVIIYE+A+GINL TLFPQDLLQE+DNL+LR VNYILY GKPIRGIS TSIQLVRTCL+LNWD+DKKSSSI+EAR +FVE+STNGL+++FLRI+L
Subjt: VFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDL
Query: VKCDTSYI-RKRKDPSGSGLIFNN-----------------EVPQSFSKNQGTIRTLR--NKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDP-L
VK SYI RKR DPSGS I NN V QS +NQGTI TL NKE QS IILS+SNC Q+D FNDVK NVIKES K+DP +
Subjt: VKCDTSYI-RKRKDPSGSGLIFNN-----------------EVPQSFSKNQGTIRTLR--NKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDP-L
Query: EIRNSLGPLGAAPQIVNFYSFY--QLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISL
IRNSLGPLG A QI NFY FY LITHN IS+TKY +L NLKQTFQV+KYYLMDENG I+N DP +N VLN FNLNW+FL HN YCE ISL
Subjt: EIRNSLGPLGAAPQIVNFYSFY--QLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISL
Query: GQFFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEI
GQF EN+C+AKN PHLKSGQ+IIV +DSVVIRSAKPYLAT GATVH HYGEILYEG+TLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSISI+L+K +
Subjt: GQFFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEI
Query: E-----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRA
E +G VYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICY A
Subjt: E-----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRA
Query: VLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEI--RDILFHHKELFD
+LLGIT+ SLNTQSFISEASFQET RVLAKAALRGRIDWL+GLKENVVLGGMIPVGTGF+ L SRQH NIPL+T K +FEGE RDILFHH+ELFD
Subjt: VLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEI--RDILFHHKELFD
Query: FCISTNLHDTSEQAFLGFNDS
CIS NL+DTSEQ+F+GFNDS
Subjt: FCISTNLHDTSEQAFLGFNDS
|
|
| Q0ZJ30 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 73.37 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN NFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP N MIPERIFIQTLIGRVLADDIYMGPRCI IRNQDIGIGL+
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQ Q ISIRTPFTC+STSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEH+RAPSNGKIKFNED VHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDL VTIESE IIHNV IPPKS LLVQNDQYVESEQVIAEIRAGTYT N KERVRKHIYSDSEGEMHWSTDVYHAPEFTY NVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSC S+VPFS++KDQDQ++V SLSVERRYIS+ SV ND+V H+F+ DL GK E I YSELN I+ TG+ NL PAI H N DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF----------------------------------------------------------------VEI
N FII F S+QE EKEL SGISIEIPING F V I
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFF----------------------------------------------------------------VEI
Query: VFLLISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKYF
+ S+++ I+ R+TL+ RSRV GLVRVE+KKKRIELKIFSGDI FPGE +KISRH GILIPP KKNSK+S KLKNWIYVQ ITPTKKKYF
Subjt: VFLLISMILNTEEIL----RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKYF
Query: VFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDL
V VRPV+ YE+ADGINL TLFPQDLLQERDN+ L+ VNYILY NGKPIRGIS TSIQLVRTCL+LNW ++KKSS I++ SF+EV TNGL+++FL I+L
Subjt: VFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRIDL
Query: VKCDTSYIRKRKDPSGSGLIFNNE---------------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKD
VK SY KR DPS SGLI +N + Q KNQGTIRTL RNKE QS IILS+SNC ++ FNDVK NVIKES KKD
Subjt: VKCDTSYIRKRKDPSGSGLIFNNE---------------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKD
Query: -PLEIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRIS
P+ IRNSLGPLG A QI NFYSFY LITHN I +TKY QLDN KQTFQ +KYYLMDENG N DP +NI+LN FNLNW+FL HN YCEET IS
Subjt: -PLEIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRIS
Query: LGQFFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKE
LGQF ENVCIAKN PHLKSGQ++IV+VDSVVIRSAKPYLAT GATVH HYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS++L+K
Subjt: LGQFFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKE
Query: IE-----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYR
+E +G VYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRA EEAICYR
Subjt: IE-----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYR
Query: AVLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK--IFEGEIRDILFHHKELF
+LLGIT+ SLNTQSFISEASFQETARVLAKAAL GRIDWL+GLKENVVLGGMIPVGTGF+ L HRSRQHNNIPLE KK +FE E+RDILFHH+ELF
Subjt: AVLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK--IFEGEIRDILFHHKELF
Query: DFCISTNLHDTSEQAFLGFNDS
D C S N HDTSEQ+F+GFNDS
Subjt: DFCISTNLHDTSEQAFLGFNDS
|
|
| Q49L08 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 73.1 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIE+WYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRG+SVSP N M+PERIFIQTLIGRVLADDIYMGPRCI IRNQDIGIGL+
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITF+TQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEH+RAPSNGKIKFN+DLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLC IDL VTIESEDI+HNVTIPPKS LLVQN+QYVESEQVIAEIRAGTYT NLKERVRKHIYS+SEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGK-NESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRR
HLWILSGGSC S VPFSLYKDQDQ+N+ S ERRYISSLSVNND++R++ D GK E I DYSELN I+ NL YP F N DLLAKRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGK-NESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRR
Query: RNGFIIQFDSLQEREKELPTTSGISIEIPINGF---------------------FVEIVFLLISMILNTEEIL---------------------------
RN F+I S+QER+KEL SGISIE+PING ++ L + ++ E+++
Subjt: RNGFIIQFDSLQEREKELPTTSGISIEIPINGF---------------------FVEIVFLLISMILNTEEIL---------------------------
Query: --------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKY
R+ L+ RSRVGGLVRVE+KKKRIELKIFSGDI+FPGE DKISRH+GILIPP K N K+S K KNWIYVQ ITPTKKKY
Subjt: --------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKKY
Query: FVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRID
FV VRPV+ YE+ DGINL TLFP DLLQERDN++LR VNYI+Y NGKPIRGIS TSIQLVRTCL+LNWD+DKKSSSI+EA SFVEVSTNGL+++FLRID
Subjt: FVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRID
Query: LVKCDTSYIRKRKDPSGSGLIFNNE----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDP-LE
LVK SY+RKR DPSGSGLI +++ + Q S+NQGTIRTL +NKE S IILS+SNC ++ FN K NVIKES KKDP ++
Subjt: LVKCDTSYIRKRKDPSGSGLIFNNE----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDP-LE
Query: IRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQF
IRNS+GPLG Q VNFYSFY LITHNPI +TKYLQL+NLKQTFQVI YYLMDENG ILN D +NIVLN+FNLNW+FL HNY+ +Y EE ISLGQF
Subjt: IRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQF
Query: FFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE--
ENVCI+KN PHLKSGQ++IV+VDSVVIRSAKPYLAT GATVH HYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS++L+K IE
Subjt: FFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE--
Query: ---------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLL
+G VYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRA RTGRALEE+ICYRA+LL
Subjt: ---------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLL
Query: GITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIST
GIT+ SLNTQSFISEASFQETARVLAKAALRGRIDWL+GLKENVV+GGMIPVGTGF+ L HRSRQH NIPL+T K FEGEI DILFHH+ELFD IS
Subjt: GITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCIST
Query: NLHDTSEQAFLGFNDS
HDTSEQ+F GFNDS
Subjt: NLHDTSEQAFLGFNDS
|
|
| Q4VZP3 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 84.14 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGI VSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIG+RNQDIGIGLI
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGLI
Query: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
NRFITFQTQPISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Subjt: NRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPTRT
Query: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
RHGHPAFLCYIDL VTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Subjt: RHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTS
Query: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
HLWILSGGSC CS+VPFSLYKDQDQINVHSL VERRYISSLSVNNDKV KFYGPDL GKNE+GI DYSELNPILCTGQSNLTYPAIFHGN DLLAKRRR
Subjt: HLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKRRR
Query: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
NGFIIQF+SLQEREKEL SGISIEIPING F L + IL E+++
Subjt: NGFIIQFDSLQEREKELPTTSGISIEIPINGFFVEIVFLL---------------------ISMILNTEEIL----------------------------
Query: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDI+FPGEMDKISRHNGILIPPERVKKNSKKS K KNWIYVQWITPTKKK
Subjt: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
YFVFVRPVIIYELADGINLV LFPQDLLQERDNLELR NYILY NGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSI++AR SFVEVSTNGLV+NFLRI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
DL K DT+YIRKRKDPSGSGLIFNNE VPQS S+NQGTIRTL RNKERQS IILSASNCLQIDLFNDVKD NVIKESSKKDPL
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-----------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL
Query: -EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLG
IRNSLGPLGAAPQIVNFYSFY LITHNPISLTKYLQLDNLKQ FQV+KYYLMDENGGILNSDP NIV NTFNLNWHFL NYH +YCEETP RISLG
Subjt: -EIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLG
Query: QFFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE
QFFFENVCIAKNRPHLKSGQIIIV+VDS+VIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS+SL+K IE
Subjt: QFFFENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE
Query: -----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAV
+G VYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAV
Subjt: -----------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAV
Query: LLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCI
LLGITK SLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGE+RDILFHHKELFDF I
Subjt: LLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKIFEGEIRDILFHHKELFDFCI
Query: STNLHDTSEQAFLGFNDS
STNLHDTSEQ FLGFNDS
Subjt: STNLHDTSEQAFLGFNDS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G57660.1 nuclear RNA polymerase A1 | 6.1e-12 | 26.4 | Show/hide |
Query: NPVHIMSFSGARG---NASQVHQLVGMRGLMSDPQGQMID---LP--------------IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRR
N + +M+ SGA+G N Q+ +G + L +M+ LP I GL EY C R+G+VDTAV+TS +GYL R
Subjt: NPVHIMSFSGARG---NASQVHQLVGMRGLMSDPQGQMID---LP--------------IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRR
Query: LVEVVQHI------VVRRTDCGTIR------GISVSPGN--RMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGL---INRFITFQTQPISIRTP
L++ ++ + VR D I+ G+ V + E Q ++ + ++D+ G D+ I L +F+ I +
Subjt: LVEVVQHI------VVRRTDCGTIR------GISVSPGN--RMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIGL---INRFITFQTQPISIRTP
Query: FTCR-------STSWICRLCYGRKAVGIIAGQSIGEPGTQLTLRTFHTGG
F + + + L + VG++A QS+GEP TQ+TL TFH G
Subjt: FTCR-------STSWICRLCYGRKAVGIIAGQSIGEPGTQLTLRTFHTGG
|
|
| AT4G35800.1 RNA polymerase II large subunit | 2.3e-06 | 35.63 | Show/hide |
Query: EAICYRAVLLGITKTSLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFREL-AHRSRQHNNIPLETP
+ + YR L+ IT+ +N + SF+ET +L AA D LRG+ EN++LG + P+GTG EL + N I L+ P
Subjt: EAICYRAVLLGITKTSLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFREL-AHRSRQHNNIPLETP
|
|
| AT4G35800.1 RNA polymerase II large subunit | 6.6e-06 | 38.33 | Show/hide |
Query: IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIR
++++ GL+ E+ G R+G++DTAV+TS+ GY+ RRLV+ ++ I+V+ GT+R
Subjt: IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIR
|
|
| AT4G35800.1 RNA polymerase II large subunit | 6.8e-03 | 65.38 | Show/hide |
Query: VGIIAGQSIGEPGTQLTLRTFHTGGV
+G +A QSIGEP TQ+TL TFH GV
Subjt: VGIIAGQSIGEPGTQLTLRTFHTGGV
|
|
| AT5G60040.1 nuclear RNA polymerase C1 | 6.3e-09 | 24.42 | Show/hide |
Query: IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS----------------VSPGNRMIP---ERIFIQT-L
+ ++ GL+ TE+ G R+G+VDTAV+T+ GY++RRL++ ++ ++V + T+R S + G P R+F++
Subjt: IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS----------------VSPGNRMIP---ERIFIQT-L
Query: IGRVLADDIYMGPRCIG-------IRNQ------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGR---------KAVGIIAGQSI
+ Y+ + +R+ D + + F++ Q + + T + ++C R A+G I QSI
Subjt: IGRVLADDIYMGPRCIG-------IRNQ------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGR---------KAVGIIAGQSI
Query: GEPGTQLTLRTFHTGGV
GEPGTQ+TL+TFH GV
Subjt: GEPGTQLTLRTFHTGGV
|
|
| AT5G60040.2 nuclear RNA polymerase C1 | 6.3e-09 | 24.42 | Show/hide |
Query: IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS----------------VSPGNRMIP---ERIFIQT-L
+ ++ GL+ TE+ G R+G+VDTAV+T+ GY++RRL++ ++ ++V + T+R S + G P R+F++
Subjt: IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS----------------VSPGNRMIP---ERIFIQT-L
Query: IGRVLADDIYMGPRCIG-------IRNQ------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGR---------KAVGIIAGQSI
+ Y+ + +R+ D + + F++ Q + + T + ++C R A+G I QSI
Subjt: IGRVLADDIYMGPRCIG-------IRNQ------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGR---------KAVGIIAGQSI
Query: GEPGTQLTLRTFHTGGV
GEPGTQ+TL+TFH GV
Subjt: GEPGTQLTLRTFHTGGV
|
|
| ATCG00170.1 DNA-directed RNA polymerase family protein | 0.0e+00 | 69.92 | Show/hide |
Query: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
QDAEQQS ILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Subjt: QDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREG
Query: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP--GNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIG
LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NRM+ ERIFIQTLIGRVLADDIY+G RC+ RNQD+GIG
Subjt: LSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP--GNRMIPERIFIQTLIGRVLADDIYMGPRCIGIRNQDIGIG
Query: LINRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPT
L+NR ITF TQ ISIRTPFTCRSTSWICRLCYGR +AVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEH+RAP NGKIKFNEDLVHPT
Subjt: LINRFITFQTQPISIRTPFTCRSTSWICRLCYGR-----------KAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEDLVHPT
Query: RTRHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
RTRHGHPAFLCYIDLSV IESEDIIH+VTIPPKS LLVQNDQYVESEQVIAEIR GTYT + KERVRK+IYSDSEGEMHWSTDV HAPEFTYSNVHLLPK
Subjt: RTRHGHPAFLCYIDLSVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Query: TSHLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKR
TSHLWILSGGSC S++ FS++KDQDQ+N+ LS ER+ ISSLSVNND+V KF+ D + GI DYSELN L T NL Y AIFH N DLLAKR
Subjt: TSHLWILSGGSCECSVVPFSLYKDQDQINVHSLSVERRYISSLSVNNDKVRHKFYGPDLYGKNESGILDYSELNPILCTGQSNLTYPAIFHGNFDLLAKR
Query: RRNGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------VEIVFLLISMILNTEEIL--------------------------
RRN F+I F S+QE+EKE SGIS+EIPING F ++ L I+ E+++
Subjt: RRNGFIIQFDSLQEREKELPTTSGISIEIPINGFF---------------------VEIVFLLISMILNTEEIL--------------------------
Query: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
RLTL+IRS+VGGL+RVEKKKKRIELKIFSGDI+FP + DKISRH+GILIPP R KKNSK+S K KNWIYVQ ITPTKKK
Subjt: ---------------------RLTLSIRSRVGGLVRVEKKKKRIELKIFSGDINFPGEMDKISRHNGILIPPERVKKNSKKS-KLKNWIYVQWITPTKKK
Query: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
+FV VRPV YE+AD INL TLFPQDL +E+DN++LR NYILY NGKP RGIS TSIQLVRTCL+LNWD K+SS++E R FVEVST GL+Q+F+RI
Subjt: YFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRAVNYILYENGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIKEARVSFVEVSTNGLVQNFLRI
Query: DLVKCDTSYIRKRKDPSGSGLIFNNE-------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL-EIR
LVK SYIRKR + SGLI + + QS +N GTIR RNKE QS +ILS+SNC ++ FN VK NVI +S KK+ L I+
Subjt: DLVKCDTSYIRKRKDPSGSGLIFNNE-------------VPQSFSKNQGTIRTL--RNKERQSFIILSASNCLQIDLFNDVKDLNVIKESSKKDPL-EIR
Query: NSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFF
NS GPLG A I NFYSF L+T+N ISL KY QLDNLK FQ I YL+DENG ILN DP +N+VLN F LNW+FL NYH +YCEET ISLGQFF
Subjt: NSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNLKQTFQVIKYYLMDENGGILNSDPSNNIVLNTFNLNWHFLPHNYHQSYCEETPPRISLGQFFF
Query: ENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE----
ENVCIAK PHLKSGQ++IV+ DS VIRSAKPYLAT GA VH HY EILYEGDTLVTFIYEKSRSGDIT GLPKVEQVLEVRSIDSIS++L+K I+
Subjt: ENVCIAKNRPHLKSGQIIIVEVDSVVIRSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITHGLPKVEQVLEVRSIDSISISLQKEIE----
Query: -------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGI
+G VYRSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVF PGELIGLLRAERTGRALEEAICYRAVLLGI
Subjt: -------------VG----------------MSVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGI
Query: TKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRE-LAHRSRQHNNIPLETPPKK--IFEGEIRDILFHHKELFDFCIS
T+ SLNTQSFISEASFQETARVLAKAALRGRIDWL+GLKENVVLGG+IP GTGF + L H SRQH NI LE K +FEG++RDILF+H+E D IS
Subjt: TKTSLNTQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRE-LAHRSRQHNNIPLETPPKK--IFEGEIRDILFHHKELFDFCIS
|
|
