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Sed0017790 (gene) of Chayote v1 genome

Gene IDSed0017790
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG05:1080284..1080469
RNA-Seq ExpressionSed0017790
SyntenySed0017790
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4291342.1 unnamed protein product [Prunus armeniaca]1.3e-0848.33Show/hide
Query:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N + H   +VFW E ++K SW+  RC    C W AKDDGIYI N  E+R +L  +W PGW
Subjt:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
KAE8650840.1 hypothetical protein Csa_017632 [Cucumis sativus]2.4e-1557.38Show/hide
Query:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        MSN ++HV++EVFWPE+ SK +++ RC D++C WSA++DGIYI+N  EN+ +LHTKWLP +
Subjt:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
XP_007201112.2 uncharacterized protein LOC18768730 [Prunus persica]7.5e-0950Show/hide
Query:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N + H   +VFW E +SK SW+  RC    C W AKDDGIYI N  E R +L  +W PGW
Subjt:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
XP_015892179.1 S-protein homolog 1-like [Ziziphus jujuba]2.2e-0847.37Show/hide
Query:  NSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N H   +VFWPE + K W+  RC   +C W+AKDDG Y+ N   N+ +L  KW PGW
Subjt:  NSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
XP_034229620.1 S-protein homolog 1-like [Prunus dulcis]7.5e-0950Show/hide
Query:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N + H   +VFW E +SK SW+  RC    C W AKDDGIYI N  E R +L  +W PGW
Subjt:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
TrEMBL top hitse value%identityAlignment
A0A0A0L8P9 Uncharacterized protein3.1e-1660Show/hide
Query:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPG
        MSN ++HV++EVFWPE+ SK +++ RC D++C WSA++DGIYI+N  EN+ +LHTKWLPG
Subjt:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPG
A0A251N105 S-protein homolog3.6e-0950Show/hide
Query:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N + H   +VFW E +SK SW+  RC    C W AKDDGIYI N  E R +L  +W PGW
Subjt:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
A0A5E4EKH7 S-protein homolog3.6e-0950Show/hide
Query:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N + H   +VFW E +SK SW+  RC    C W AKDDGIYI N  E R +L  +W PGW
Subjt:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
A0A6J5VTZ1 S-protein homolog6.2e-0948.33Show/hide
Query:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N + H   +VFW E ++K SW+  RC    C W AKDDGIYI N  E+R +L  +W PGW
Subjt:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
M5VN50 S-protein homolog3.6e-0950Show/hide
Query:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        N + H   +VFW E +SK SW+  RC    C W AKDDGIYI N  E R +L  +W PGW
Subjt:  NKNSHVTMEVFWPESQSK-SWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 12.8e-0636.07Show/hide
Query:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        M+  N H+ + VFW +      +  RCG   C W+AK DG+Y++N+      L  KW  GW
Subjt:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
Q2HQ46 S-protein homolog 741.8e-0534.43Show/hide
Query:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        MS  + H+ ++VFW +      +  RC    C W+AK+DG+Y++N+      L  KW  GW
Subjt:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 12.0e-0736.07Show/hide
Query:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        M+  N H+ + VFW +      +  RCG   C W+AK DG+Y++N+      L  KW  GW
Subjt:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
AT4G29035.1 Plant self-incompatibility protein S1 family1.3e-0634.43Show/hide
Query:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW
        MS  + H+ ++VFW +      +  RC    C W+AK+DG+Y++N+      L  KW  GW
Subjt:  MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAACAAAAACAGCCATGTCACCATGGAAGTGTTTTGGCCTGAATCTCAATCTAAGTCATGGATTGCTAAACGATGTGGGGATCATATGTGTTCGTGGTCGGCGAA
AGATGATGGAATTTATATTTTCAATGCTCATGAAAATAGGTCTGATCTTCATACTAAATGGCTCCCTGGCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAACAAAAACAGCCATGTCACCATGGAAGTGTTTTGGCCTGAATCTCAATCTAAGTCATGGATTGCTAAACGATGTGGGGATCATATGTGTTCGTGGTCGGCGAA
AGATGATGGAATTTATATTTTCAATGCTCATGAAAATAGGTCTGATCTTCATACTAAATGGCTCCCTGGCTGGTAA
Protein sequenceShow/hide protein sequence
MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW