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Sed0017797 (gene) of Chayote v1 genome

Gene IDSed0017797
OrganismSechium edule (Chayote v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationLG09:9743448..9743732
RNA-Seq ExpressionSed0017797
SyntenySed0017797
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]1.5e-1967.02Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL LLLAVVLLTTT ALK+PSDSNQEVIP++D++LPTTT T T+ + E +  K  +YK+   + K PPYKK P YKKHPPYKKYPPSS+
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]1.5e-1967.02Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL LLLAVVLLTTT ALK+PSDSNQEVIP++D++LPTTT T T+ + E +  K  +YK+   + K PPYKK P YKKHPPYKKYPPSS+
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]7.8e-1361Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSD---QKLPTTTMTMTETEPELEDD---KPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL LLLAVVLLTTT ALK+PS+SNQEVIP +D    KLPTT      T+P  E     +P+ YKK     K PPYK+ P YKK PPYKKYPPSS+
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSD---QKLPTTTMTMTETEPELEDD---KPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

XP_022930415.1 uncharacterized protein LOC111436870 [Cucurbita moschata]1.5e-1968.09Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M +KYFL LLLAVVLLTTT ALK+PSDS  EVIPVS+QKLP+T  T T+TEP  E ++  FY+K+  + KYPPYK+ P YKK PPYKKYPPSSN
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]1.7e-2069.15Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M +KYFL LLLAVVLLTTT ALK+PSDS  EVIPVS+QKLP+T  T T+TEP  E ++  FY+K+P + KYPPYK+ P YKK PPYKKYPPSSN
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein3.8e-1361Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSD---QKLPTTTMTMTETEPELEDD---KPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL LLLAVVLLTTT ALK+PS+SNQEVIP +D    KLPTT      T+P  E     +P+ YKK     K PPYK+ P YKK PPYKKYPPSS+
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSD---QKLPTTTMTMTETEPELEDD---KPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

A0A0A0LNP2 Uncharacterized protein3.5e-1159.79Show/hide
Query:  KYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSD---QKLPTTTMTMTETEPELEDD---KPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        KYFL LLLAVVLLTTT ALK+P +SNQE IP +D    KLPTT      T+P  E     +P+ YKK     K PPYKK P YKK PPYKKYPPSS+
Subjt:  KYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSD---QKLPTTTMTMTETEPELEDD---KPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like9.3e-1257.45Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL LLLA VLL+TT ALK+PS S+QEVIP +D    T   T+ +   E +  +  F  KKP   K PPYKK P YKK PPYKKYPPSS+
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like9.3e-1257.45Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL LLLA VLL+TT ALK+PS S+QEVIP +D    T   T+ +   E +  +  F  KKP   K PPYKK P YKK PPYKKYPPSS+
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

A0A6J1EWV3 uncharacterized protein LOC1114368707.1e-2068.09Show/hide
Query:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M +KYFL LLLAVVLLTTT ALK+PSDS  EVIPVS+QKLP+T  T T+TEP  E ++  FY+K+  + KYPPYK+ P YKK PPYKKYPPSSN
Subjt:  MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGAAATACTTTCTTGCTCTTCTTCTCGCCGTGGTGCTTCTTACCACAACTCATGCTCTAAAAAATCCATCAGACTCCAACCAGGAAGTAATTCCGGTTAGCGA
TCAAAAGCTACCGACCACGACCATGACCATGACCGAGACCGAACCCGAGTTAGAAGACGATAAACCCAACTTCTACAAGAAGAAACCACGCCACCCGAAGTACCCACCCT
ACAAGAAACGTCCCTCATACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTGAAATACTTTCTTGCTCTTCTTCTCGCCGTGGTGCTTCTTACCACAACTCATGCTCTAAAAAATCCATCAGACTCCAACCAGGAAGTAATTCCGGTTAGCGA
TCAAAAGCTACCGACCACGACCATGACCATGACCGAGACCGAACCCGAGTTAGAAGACGATAAACCCAACTTCTACAAGAAGAAACCACGCCACCCGAAGTACCCACCCT
ACAAGAAACGTCCCTCATACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCAACTGA
Protein sequenceShow/hide protein sequence
MSLKYFLALLLAVVLLTTTHALKNPSDSNQEVIPVSDQKLPTTTMTMTETEPELEDDKPNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN