CuGenDBv2

Gene ID	Sed0017804
Organism	Sechium edule (Chayote v1)
Description	protein CWC15 homolog
Genome location	LG08:40104792..40107709
RNA-Seq Expression	Sed0017804
Synteny	Sed0017804
Gene Ontology terms	GO:0045292 - mRNA cis splicing, via spliceosome (biological process) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR006973 - Pre-mRNA-splicing factor Cwf15/Cwc15

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577507.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-108

94.78

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDR+HRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESDDD---DDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIP+SLDADDSDVDVKSD ESDDD   DDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPQSLDADDSDVDVKSDDESDDD---DDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK
        ARGETKTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK

XP_004149567.1 protein CWC15 homolog [Cucumis sativus]

9.7e-110

96.49

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDES-DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQAR
        RIIP+SLDADDSDVDVKSDDES DDDDDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQAR
Subjt:  RIIPQSLDADDSDVDVKSDDES-DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQAR

Query:  GETKTPKRFINDTIRSDFHRKFLQKYMK
        GE+KTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  GETKTPKRFINDTIRSDFHRKFLQKYMK

XP_008449060.1 PREDICTED: protein CWC15 homolog [Cucumis melo]

4.8e-109

95.63

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSK+KSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDES--DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIP+SLDADDSDVDVKSDDES  DDDDDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPQSLDADDSDVDVKSDDES--DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGETKTPKRFINDTIRSDFHRKFLQKYMK
        RGE+KTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  RGETKTPKRFINDTIRSDFHRKFLQKYMK

XP_022932353.1 protein CWC15 homolog [Cucurbita moschata]

1.8e-108

94.78

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDR+HRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESDDDD---DEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIP+SLDADDSDVDVKSD ESDDDD   DEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPQSLDADDSDVDVKSDDESDDDD---DEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK
        ARGETKTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK

XP_038905802.1 protein CWC15 homolog [Benincasa hispida]

1.3e-109

96.07

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDES--DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIP+SLDADDSDVDVKSDDES  DDDDDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPQSLDADDSDVDVKSDDES--DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGETKTPKRFINDTIRSDFHRKFLQKYMK
        RGE+KTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  RGETKTPKRFINDTIRSDFHRKFLQKYMK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L647 Uncharacterized protein

4.7e-110

96.49

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDES-DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQAR
        RIIP+SLDADDSDVDVKSDDES DDDDDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQAR
Subjt:  RIIPQSLDADDSDVDVKSDDES-DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQAR

Query:  GETKTPKRFINDTIRSDFHRKFLQKYMK
        GE+KTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  GETKTPKRFINDTIRSDFHRKFLQKYMK

A0A1S3BL67 protein CWC15 homolog

2.3e-109

95.63

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSK+KSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDES--DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIP+SLDADDSDVDVKSDDES  DDDDDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPQSLDADDSDVDVKSDDES--DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGETKTPKRFINDTIRSDFHRKFLQKYMK
        RGE+KTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  RGETKTPKRFINDTIRSDFHRKFLQKYMK

A0A6J1F1Z0 protein CWC15 homolog

8.8e-109

94.78

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDR+HRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESDDDD---DEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIP+SLDADDSDVDVKSD ESDDDD   DEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPQSLDADDSDVDVKSDDESDDDD---DEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK
        ARGETKTPKRFINDTIR+DFHRKFLQKYMK
Subjt:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK

A0A6J1GEX7 protein CWC15 homolog isoform X2

8.8e-109

94.78

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESD---DDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIP+SLDADDSDVDVKSD+ESD   DDDDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPQSLDADDSDVDVKSDDESD---DDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK
        ARGETKTPKRFINDTIR+DFHRKFL KYMK
Subjt:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK

A0A6J1KV80 protein CWC15 homolog isoform X2

8.8e-109

94.78

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRKEGQDTH+E+QRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESD---DDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIP+SLDADDSDVDVKSD+ESD   DDDDEDDTEALLAELEQIKKER EEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPQSLDADDSDVDVKSDDESD---DDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK
        ARGETKTPKRFINDTIR+DFHRKFL KYMK
Subjt:  ARGETKTPKRFINDTIRSDFHRKFLQKYMK

SwissProt top hits

e value

%identity

Alignment

Q0VFP5 Protein CWC15 homolog

1.6e-43

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  EEV+ R+ R ELE+RER     KN+    R+H           K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN-----EQPSSFSVKRRWDDDVVFK
        +I   +LDADD   D  +DD+SD+D D DDT ALLAELE+IKKER EE+ RKE +++ EE +++   +L GNPLLN     +  ++F VKRRWDDDVVFK
Subjt:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN-----EQPSSFSVKRRWDDDVVFK

Query:  NQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK
        N A+G  E K  KRF+NDT+RS+FH+KF++KY+K
Subjt:  NQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK

Q2KJD3 Spliceosome-associated protein CWC15 homolog

2.8e-43

49.36

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  EEV+ R+ R ELE+RER     KN+    R+H   S +     K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDES-DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVVF
        +I   +LDADD   D + +DE  +++ D+DDT ALLAELE+IKKER EE+ RKE++++ EE +++   +L GNPLLN     QP ++F VKRRWDDDVVF
Subjt:  RIIPQSLDADDSDVDVKSDDES-DDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVVF

Query:  KNQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK
        KN A+G  + K  KRF+NDT+RS+FH+KF++KY+K
Subjt:  KNQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK

Q6NUB2 Protein CWC15 homolog A

6.2e-43

50.21

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  EEV+ R+ R ELE+RER     KN+    R+H           K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN------EQPSSFSVKRRWDDDVVF
        +I   +LDADD   D   D++SD+D D DDT ALLAELE+IKKER EEK RKE +++ EE +++   +L GNPLLN      +  +SF VKRRWDDDVVF
Subjt:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN------EQPSSFSVKRRWDDDVVF

Query:  KNQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK
        KN A+G  E K  KRF+NDT+RS+FH+KF++KY+K
Subjt:  KNQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK

Q9JHS9 Spliceosome-associated protein CWC15 homolog

8.1e-43

49.15

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  EEV+ R+ R ELE+RER     KN+    R+H   S +     K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVVFK
        +I   +LDADD   D + D++ +++ D+DDT ALLAELE+IKKER EE+ RKE++++ EE +++   +L GNPLLN     QP ++F VKRRWDDDVVFK
Subjt:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVVFK

Query:  NQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK
        N A+G  + K  KRF+NDT+RS+FH+KF++KY+K
Subjt:  NQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK

Q9P013 Spliceosome-associated protein CWC15 homolog

8.1e-43

49.15

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  EEV+ R+ R ELE+RER     KN+    R+H   S +     K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVVFK
        +I   +LDADD   D + D++ +++ D+DDT ALLAELE+IKKER EE+ RKE++++ EE +++   +L GNPLLN     QP ++F VKRRWDDDVVFK
Subjt:  RIIPQSLDADDSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVVFK

Query:  NQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK
        N A+G  + K  KRF+NDT+RS+FH+KF++KY+K
Subjt:  NQARG--ETKTPKRFINDTIRSDFHRKFLQKYMK

Arabidopsis top hits

e value

%identity

Alignment

AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein

2.3e-93

80.95

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIE
        MTTAARPTWAPAKGGNEQGG RIFGPSQKYSSRD+AAHTTLKPR+EGQ T EE+Q+ NLRDELE+RERRHFSSK+KSY DDRD R+GSQLLLE  KRD E
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIE

Query:  DRIIPQSLDADDSDVDVKSDDESD---DDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKN
        +RIIP+S+DADDSDVD+KSDD+SD   DDDDEDDTEAL+AEL+QIKKERVEE+LRKE++++ EEL  KE ELL+GNPLLN  P+SFSVKRRWDDDVVFKN
Subjt:  DRIIPQSLDADDSDVDVKSDDESD---DDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKN

Query:  QARGETKTPKRFINDTIRSDFHRKFLQKYMK
        QARGE K PKRFINDTIR+DFHRKFL +YMK
Subjt:  QARGETKTPKRFINDTIRSDFHRKFLQKYMK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAACGAACAAGGTGGCACTCGAATTTTTGGCCCCTCTCAGAAATATTCCTCCAGAGACATCGCTGC
TCATACCACTTTAAAACCCAGAAAGGAAGGACAAGACACCCACGAAGAAGTGCAAAGGAGGAATCTCAGGGATGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCCA
AGAATAAGTCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATTATTCCACAAAGCTTAGATGCTGAC
GATTCGGATGTGGATGTCAAAAGTGACGATGAGAGTGATGATGACGATGATGAAGATGATACTGAAGCTCTTTTGGCTGAGCTCGAACAAATAAAGAAGGAAAGAGTGGA
GGAGAAGCTTCGAAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCAGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCGTCCTCTTTTAGTG
TCAAAAGAAGATGGGATGATGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAAACTCCTAAGCGCTTTATAAATGATACCATCAGGAGTGACTTCCACCGTAAG
TTCTTGCAGAAGTACATGAAGTAA

mRNA sequence

Show/hide mRNA sequence

CTAAAATTGGCCGCCGGTTCGCCGCCCATCGAACCGCCATTGAGATTTGGATTTAGAGCGTAAGACCCGATTCGATGAAAGCCTGAATAAAACCTGAAGTTCCCGACTTA
GATTTCTCCTCTTTCATAGCCATCGATTCTGTGCCTTCCACATTCTCATACCCCATCGTCAATCGTTTACAGGGCCGAGGAGACGAGTTCAAGGTCTACAGATGACTACT
GCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAACGAACAAGGTGGCACTCGAATTTTTGGCCCCTCTCAGAAATATTCCTCCAGAGACATCGCTGCTCATACCAC
TTTAAAACCCAGAAAGGAAGGACAAGACACCCACGAAGAAGTGCAAAGGAGGAATCTCAGGGATGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCCAAGAATAAGT
CATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATTATTCCACAAAGCTTAGATGCTGACGATTCGGAT
GTGGATGTCAAAAGTGACGATGAGAGTGATGATGACGATGATGAAGATGATACTGAAGCTCTTTTGGCTGAGCTCGAACAAATAAAGAAGGAAAGAGTGGAGGAGAAGCT
TCGAAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCAGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCGTCCTCTTTTAGTGTCAAAAGAA
GATGGGATGATGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAAACTCCTAAGCGCTTTATAAATGATACCATCAGGAGTGACTTCCACCGTAAGTTCTTGCAG
AAGTACATGAAGTAAACATGATTGTCAAAATCTATTGGGTAAATCTAGAGTGGGACTCTGCAATTGTGAATGTATCATAACGTATTAAAAATGCACTGGACATTTGTTTT
ATCTGATATTTCATGTAGCAGCAGCTTTTATAAAGCTATGCCTTTGAATATTTCAGCCTGTCTTCTGAATATGATGAACTACAATGATTCAAAACTATGATGTGGTGGAA
TGAATATTAAAATGCTTTCATCTG

Protein sequence

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MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKEGQDTHEEVQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPQSLDAD
DSDVDVKSDDESDDDDDEDDTEALLAELEQIKKERVEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRK
FLQKYMK

Sed0017804 (gene) of Chayote v1 genome