CuGenDBv2

Gene ID	Sed0017827
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG04:27942537..27943958
RNA-Seq Expression	Sed0017827
Synteny	Sed0017827
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008442682.1 PREDICTED: uncharacterized protein LOC103486481 [Cucumis melo]

9.5e-46

78.12

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MG DRK+IL+GL  AM +GL+VYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRAN C SEL +LK SFEKVGDAA+ N KL  M
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE F+L  +V+ALQ++LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

XP_022946927.1 uncharacterized protein LOC111450864 [Cucurbita moschata]

7.0e-49

83.59

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MGR+RKQILVGLAAAM LGL+VYM+LWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRA SCNSEL KLKESFEKVGD A+ N KL N+
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE  +L KEV+ALQ +LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

XP_023005818.1 uncharacterized protein LOC111498710 [Cucurbita maxima]

1.2e-48

82.81

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MGR++KQILVGLAAAM LGL+VYM+LW IDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRANSCNSEL KLKESFEKVGD A+ N KL N+
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE  +L KEV+ALQ +LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

XP_023540154.1 uncharacterized protein LOC111800610 [Cucurbita pepo subsp. pepo]

4.5e-48

82.03

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MGR++KQILVGLAAAM LGL+VYM+LWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRA SCNSEL KLKESFEKVGD A+ N KL N+
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE  +L KEV+ALQ +LEAE+SRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

XP_038903114.1 uncharacterized protein LOC120089790 [Benincasa hispida]

2.5e-46

78.91

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MG DRK+IL+GL  AM LGL+VYMKLWTIDYSMS+DEAELLRRQFDLANREAMDESAEWRRMYDRE DRAN CN +L KLKESFEKVGDAA+ N KL  M
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE F+L  +V+ALQ++LEAEK RCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAF5 Uncharacterized protein

1.7e-45

78.12

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MG DRK+IL+GL  AM LGL+VYMKLWTIDYSMS DEAELLRRQFDLANREAMDESAEWRRMYD E DRAN C SEL +LK SFEKVGDAAK N KL   
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE F+L  +V+ALQ++LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

A0A1S3B6A3 uncharacterized protein LOC103486481

4.6e-46

78.12

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MG DRK+IL+GL  AM +GL+VYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRAN C SEL +LK SFEKVGDAA+ N KL  M
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE F+L  +V+ALQ++LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

A0A5D3DPC8 Uncharacterized protein

4.6e-46

78.12

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MG DRK+IL+GL  AM +GL+VYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRAN C SEL +LK SFEKVGDAA+ N KL  M
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE F+L  +V+ALQ++LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

A0A6J1G4Y8 uncharacterized protein LOC111450864

3.4e-49

83.59

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MGR+RKQILVGLAAAM LGL+VYM+LWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRA SCNSEL KLKESFEKVGD A+ N KL N+
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE  +L KEV+ALQ +LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

A0A6J1L386 uncharacterized protein LOC111498710

5.8e-49

82.81

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Query:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM
        MGR++KQILVGLAAAM LGL+VYM+LW IDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYD E DRANSCNSEL KLKESFEKVGD A+ N KL N+
Subjt:  MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANM

Query:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ
        QEE  +L KEV+ALQ +LEAEKSRCGSQ
Subjt:  QEEIFSLHKEVEALQQKLEAEKSRCGSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G37195.1 unknown protein

4.1e-31

53.54

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Query:  GRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANMQ
        G +RK ILVGL  A+ LG+ VY++LWTIDY++S+D+ E LRRQFDLANREAMDESA+WRRM+D+E ++A+ CN+EL+ +KES    G+   SN KL +++
Subjt:  GRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANMQ

Query:  EEIFSLHKEVEALQQKLEAEKSRCGSQ
        +E  +L  ++E L+Q+LEA + +C S+
Subjt:  EEIFSLHKEVEALQQKLEAEKSRCGSQ

Sequences

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CDS sequence

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ATGGGGCGAGATCGGAAGCAGATCTTGGTAGGTTTAGCGGCGGCGATGTGCTTAGGGTTGATAGTGTACATGAAGCTCTGGACCATCGACTATTCCATGTCTACCGACGA
AGCCGAATTGCTCAGGAGGCAGTTCGACCTTGCGAACCGGGAGGCCATGGATGAATCTGCGGAATGGCGTCGGATGTATGATCGCGAACAAGATAGAGCTAATAGTTGTA
ACAGTGAGCTGACCAAGCTTAAGGAATCTTTTGAGAAGGTAGGGGATGCTGCTAAAAGCAATCCGAAGTTGGCAAACATGCAAGAGGAAATCTTTTCGCTCCATAAAGAA
GTGGAGGCATTACAGCAAAAGCTAGAGGCTGAGAAGTCGAGATGTGGCTCTCAATAG

mRNA sequence

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Protein sequence

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MGRDRKQILVGLAAAMCLGLIVYMKLWTIDYSMSTDEAELLRRQFDLANREAMDESAEWRRMYDREQDRANSCNSELTKLKESFEKVGDAAKSNPKLANMQEEIFSLHKE
VEALQQKLEAEKSRCGSQ

Sed0017827 (gene) of Chayote v1 genome