; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017835 (gene) of Chayote v1 genome

Gene IDSed0017835
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:24518729..24519210
RNA-Seq ExpressionSed0017835
SyntenySed0017835
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594391.1 hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3771.88Show/hide
Query:  LWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHYYQF
        +WLLWWPKNSSA          AA T+ S A K SSSHCNR +KLLRKLKKRGRVLCS++G+ S     +FQCRYDPLSYSLNFD+SG GSLLDEHYYQF
Subjt:  LWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHYYQF

Query:  CAFSSRFASNPGYVSHPATSDLTVTASR
        CAFSSRFASNPG VS PA  D TVTASR
Subjt:  CAFSSRFASNPGYVSHPATSDLTVTASR

KAG7026395.1 hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3871.76Show/hide
Query:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY
        M Q+WLLWWPKNSSA          AA T+ S A K SSSHCNR +KLLRKLKKRGRVLCS++G+ S     +FQCRYDPLSYSLNFD+SG GSLLDEHY
Subjt:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY

Query:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR
        YQFCAFSSRFASNPG VS PA  D TVTASR
Subjt:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR

XP_022926526.1 uncharacterized protein LOC111433647 [Cucurbita moschata]3.2e-3870.99Show/hide
Query:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY
        M Q+WLLWWPKNSSA          AA T+ S A K SSSHCNR +KLLRKLKKRGRVLCS++G+ S     +FQCRYDPLSYSLNFD+SG GSLLDEHY
Subjt:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY

Query:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR
        YQFC FSSRFASNPG VS PA  D TVTASR
Subjt:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR

XP_023003625.1 uncharacterized protein LOC111497167 [Cucurbita maxima]4.2e-3870.23Show/hide
Query:  MTQLWLLWWPKNSSATGAAAT--------SASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY
        M Q+WLLWWPKNSSA   ++T        + S A K SSSHCNR +KLLRKLKKRGRVLCS++G+ S     +FQCRYDPLSYSLNFD+SG GSLLDEHY
Subjt:  MTQLWLLWWPKNSSATGAAAT--------SASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY

Query:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR
        YQFCAFSSRFASNPG VS PA  D TVTASR
Subjt:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR

XP_023518962.1 uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo]3.2e-3870.99Show/hide
Query:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY
        M Q+WLLWWPKNSSA           A T+ S A K SSSHCNR +KLLRKLKKRGRVLCS++G+ S     +FQCRYDPLSYSLNFD+SG GSLLDEHY
Subjt:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY

Query:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR
        YQFCAFSSRFASNPG VS PA  D TVTASR
Subjt:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR

TrEMBL top hitse value%identityAlignment
A0A6J1CYQ9 uncharacterized protein LOC1110158125.6e-3668.94Show/hide
Query:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSS-SSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEH
        MTQ+WLLWWPK  SA G        AA T+ S A K+S SSHCN  +KLLRKLKKRGRVLCS+SG+ S     +FQCRYDPLSYSLNFD+SG GSLLDE 
Subjt:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSS-SSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEH

Query:  YYQFCAFSSRFASNPGYVSHPATSDLTVTASR
        YYQFCAFSSRFASNPG  SH +  D+TVTASR
Subjt:  YYQFCAFSSRFASNPGYVSHPATSDLTVTASR

A0A6J1EF60 uncharacterized protein LOC1114336471.6e-3870.99Show/hide
Query:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY
        M Q+WLLWWPKNSSA          AA T+ S A K SSSHCNR +KLLRKLKKRGRVLCS++G+ S     +FQCRYDPLSYSLNFD+SG GSLLDEHY
Subjt:  MTQLWLLWWPKNSSATG--------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY

Query:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR
        YQFC FSSRFASNPG VS PA  D TVTASR
Subjt:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR

A0A6J1EFV9 uncharacterized protein LOC1114330121.9e-3163.78Show/hide
Query:  LWLLWWPKNSSA-------TGAAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHYYQFC
        +WLLWWPKN+++       + AA T+ S A K+SSS+CN  +KLLRKLKKR RVL S++G+ S     +FQCRYDPLSYSLNFD+SG G LLDEHYYQ+C
Subjt:  LWLLWWPKNSSA-------TGAAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHYYQFC

Query:  AFSSRFASNPGYVSHPATSDLTVTASR
        AFSSRFASNPG VSH A    TVT SR
Subjt:  AFSSRFASNPGYVSHPATSDLTVTASR

A0A6J1IQV7 uncharacterized protein LOC1114776134.1e-3163.78Show/hide
Query:  LWLLWWPKNSSATG-------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHYYQFC
        +WLLWWPKN++++G       AA T+ S A K+SSS+ N  +KLLRKLKKR RVL S++G+ S     +FQCRYDPLSYSLNFD+SG G LLDEHYYQ+C
Subjt:  LWLLWWPKNSSATG-------AAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHYYQFC

Query:  AFSSRFASNPGYVSHPATSDLTVTASR
        AFSSRFASNPG VSH A   +TVT SR
Subjt:  AFSSRFASNPGYVSHPATSDLTVTASR

A0A6J1KS95 uncharacterized protein LOC1114971672.0e-3870.23Show/hide
Query:  MTQLWLLWWPKNSSATGAAAT--------SASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY
        M Q+WLLWWPKNSSA   ++T        + S A K SSSHCNR +KLLRKLKKRGRVLCS++G+ S     +FQCRYDPLSYSLNFD+SG GSLLDEHY
Subjt:  MTQLWLLWWPKNSSATGAAAT--------SASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHY

Query:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR
        YQFCAFSSRFASNPG VS PA  D TVTASR
Subjt:  YQFCAFSSRFASNPGYVSHPATSDLTVTASR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19980.1 unknown protein6.8e-1042.55Show/hide
Query:  SATGAAATSASPAGKSSSSHC-NRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLD--EHYYQFCAFSSRFAS
        + T  A T  S     + + C    ++L+RKLKK+GR+L ++S   +   G S QCRYDP+SYSLNFD    G+L D  ++Y +F AFSSR+ +
Subjt:  SATGAAATSASPAGKSSSSHC-NRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLD--EHYYQFCAFSSRFAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCAGCTCTGGCTTCTCTGGTGGCCGAAGAACTCCTCCGCCACCGGCGCCGCCGCAACTTCAGCTTCTCCGGCCGGAAAATCATCCTCATCGCACTGCAATCGCGC
TTCGAAGCTGTTGCGGAAGCTGAAGAAACGCGGCAGAGTGCTCTGTAGCAGCAGCGGAGATCAGAGCGGCAGCGGAGGCGGAAGCTTCCAGTGCCGGTACGATCCGCTGA
GCTACTCTCTCAACTTCGACAGCAGCGGCGGTGGAAGCTTGTTAGATGAACATTACTATCAGTTCTGCGCCTTCTCCTCCAGATTCGCGTCGAATCCAGGATACGTTTCT
CATCCTGCTACTTCTGATCTAACTGTTACTGCTTCTCGCAAACGCGATCTCTAA
mRNA sequenceShow/hide mRNA sequence
CATCTCCATCGCCTTCCACATTTCGCTTCTCTTTGCTCTCCAAGATCGCCGGCGACGCCACCGGAAACTTCATCTTCCTCTTCCTCTCTCATGACGCAGCTCTGGCTTCT
CTGGTGGCCGAAGAACTCCTCCGCCACCGGCGCCGCCGCAACTTCAGCTTCTCCGGCCGGAAAATCATCCTCATCGCACTGCAATCGCGCTTCGAAGCTGTTGCGGAAGC
TGAAGAAACGCGGCAGAGTGCTCTGTAGCAGCAGCGGAGATCAGAGCGGCAGCGGAGGCGGAAGCTTCCAGTGCCGGTACGATCCGCTGAGCTACTCTCTCAACTTCGAC
AGCAGCGGCGGTGGAAGCTTGTTAGATGAACATTACTATCAGTTCTGCGCCTTCTCCTCCAGATTCGCGTCGAATCCAGGATACGTTTCTCATCCTGCTACTTCTGATCT
AACTGTTACTGCTTCTCGCAAACGCGATCTCTAATCCCTACC
Protein sequenceShow/hide protein sequence
MTQLWLLWWPKNSSATGAAATSASPAGKSSSSHCNRASKLLRKLKKRGRVLCSSSGDQSGSGGGSFQCRYDPLSYSLNFDSSGGGSLLDEHYYQFCAFSSRFASNPGYVS
HPATSDLTVTASRKRDL