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Sed0017852 (gene) of Chayote v1 genome

Gene IDSed0017852
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:33503982..33506873
RNA-Seq ExpressionSed0017852
SyntenySed0017852
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578668.1 hypothetical protein SDJN03_23116, partial [Cucurbita argyrosperma subsp. sororia]6.5e-5493.86Show/hide
Query:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
        MAMASFNLALGP QK R LQ+SCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
Subjt:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR

Query:  YILNLYLESLLENS
        YILNLYL++LLE S
Subjt:  YILNLYLESLLENS
XP_004142788.1 uncharacterized protein LOC101221627 [Cucumis sativus]1.9e-5089.57Show/hide
Query:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P+ K +   Q+SCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLESLLENS
        RYILNLYLE+LLE S
Subjt:  RYILNLYLESLLENS
XP_008458808.1 PREDICTED: uncharacterized protein LOC103498107 [Cucumis melo]2.5e-5089.57Show/hide
Query:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P  K +   Q+SCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLESLLENS
        RYILNLYLE+LLE S
Subjt:  RYILNLYLESLLENS
XP_022939382.1 uncharacterized protein LOC111445315 [Cucurbita moschata]4.2e-5392.11Show/hide
Query:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
        MAMASFNLALGP QK R LQ+ CRRK+KERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
Subjt:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR

Query:  YILNLYLESLLENS
        YILNLYL++LLE S
Subjt:  YILNLYLESLLENS
XP_022993339.1 uncharacterized protein LOC111489380 [Cucurbita maxima]2.5e-5392.98Show/hide
Query:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
        MAMASFNLALGP QK R LQ+ CRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
Subjt:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR

Query:  YILNLYLESLLENS
        YILNLYL++LLE S
Subjt:  YILNLYLESLLENS
TrEMBL top hitse value%identityAlignment
A0A0A0KP15 Uncharacterized protein9.4e-5189.57Show/hide
Query:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P+ K +   Q+SCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLESLLENS
        RYILNLYLE+LLE S
Subjt:  RYILNLYLESLLENS
A0A1S3C8Q2 uncharacterized protein LOC1034981071.2e-5089.57Show/hide
Query:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MAMASFNL L P  K +   Q+SCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
Subjt:  MAMASFNLALGPQQKARS-LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLESLLENS
        RYILNLYLE+LLE S
Subjt:  RYILNLYLESLLENS
A0A6J1BVQ0 uncharacterized protein LOC1110061843.6e-5091.07Show/hide
Query:  MASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYI
        MAS NLAL   QK R LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVT RYQLRKGKYEP+EKRLDVLSTGRYI
Subjt:  MASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYI

Query:  LNLYLESLLENS
        LNLYLE+LLE S
Subjt:  LNLYLESLLENS
A0A6J1FGM6 uncharacterized protein LOC1114453152.0e-5392.11Show/hide
Query:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
        MAMASFNLALGP QK R LQ+ CRRK+KERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
Subjt:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR

Query:  YILNLYLESLLENS
        YILNLYL++LLE S
Subjt:  YILNLYLESLLENS
A0A6J1JZX4 uncharacterized protein LOC1114893801.2e-5392.98Show/hide
Query:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
        MAMASFNLALGP QK R LQ+ CRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR
Subjt:  MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGR

Query:  YILNLYLESLLENS
        YILNLYL++LLE S
Subjt:  YILNLYLESLLENS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G40500.1 unknown protein9.0e-3865.85Show/hide
Query:  MAMASFNLA-LGPQQKARS-------LQVSCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEK
        MA  + NLA +G    +R+       LQ++CR+KEK R+ +  PYKVIEITPPPK+LGIRC P NLQCGE+V IEGQTYTISAVT RYQLRKGKYEPSE+
Subjt:  MAMASFNLA-LGPQQKARS-------LQVSCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEK

Query:  RLDVLSTGRYILNLYLESLLENS
        RLDVLS  RY+LNLY ++LL+NS
Subjt:  RLDVLSTGRYILNLYLESLLENS
AT5G40500.2 unknown protein9.0e-3869.57Show/hide
Query:  MAMASFNLALGPQQKARSLQVSCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG
        MA  + NLA   +   R LQ++CR+KEK R+ +  PYKVIEITPPPK+LGIRC P NLQCGE+V IEGQTYTISAVT RYQLRKGKYEPSE+RLDVLS  
Subjt:  MAMASFNLALGPQQKARSLQVSCRRKEKERN-NFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTG

Query:  RYILNLYLESLLENS
        RY+LNLY ++LL+NS
Subjt:  RYILNLYLESLLENS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGCATCGTTCAATCTAGCGCTTGGTCCTCAGCAGAAGGCACGGTCTCTCCAAGTTTCTTGCAGAAGAAAAGAAAAGGAACGCAACAATTTTGATCCGTACAA
AGTGATTGAAATCACTCCTCCGCCGAAGAACCTCGGCATTCGTTGCTTTCCGCCCAACTTACAATGTGGGGAAAGTGTAACGATAGAAGGCCAAACATACACTATATCAG
CTGTAACTCTTCGCTATCAGCTCAGGAAAGGGAAGTATGAACCAAGTGAAAAGAGACTTGATGTTTTGTCTACAGGAAGGTACATCTTGAATTTGTATCTAGAAAGTTTA
TTAGAAAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTCCTTCGTCCCCTCGACTTGTCTGCACGGAGTTAAAATGGATCACCAAAAGAAATTGCAGAAAAATCTTTTCGATGTTTCTGGTTTTCTTTCCGTCTCTGTCCATTAA
CACGACGAAGCAAGAAACCTTCAAGCGATTATGGCGATGGCATCGTTCAATCTAGCGCTTGGTCCTCAGCAGAAGGCACGGTCTCTCCAAGTTTCTTGCAGAAGAAAAGA
AAAGGAACGCAACAATTTTGATCCGTACAAAGTGATTGAAATCACTCCTCCGCCGAAGAACCTCGGCATTCGTTGCTTTCCGCCCAACTTACAATGTGGGGAAAGTGTAA
CGATAGAAGGCCAAACATACACTATATCAGCTGTAACTCTTCGCTATCAGCTCAGGAAAGGGAAGTATGAACCAAGTGAAAAGAGACTTGATGTTTTGTCTACAGGAAGG
TACATCTTGAATTTGTATCTAGAAAGTTTATTAGAAAATTCTTGATGCCTTTGTTGTATGATAACATGTAATTACAATTATTGTGCTCATTGGTTGAGCTACTTTGTGCA
TATTTTCCATTTGAAGAGGCTTTTCAAGAACTTATTTGTATCTAGTGCTGGCCAATCATGTTAAGGATGTAATTGTTCAATAATTATGGGGAAGAATTGAACCATCGATC
TTTAAAGTGGTAATTAATAGTCTTGTCTACT
Protein sequenceShow/hide protein sequence
MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYILNLYLESL
LENS