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Sed0017878 (gene) of Chayote v1 genome

Gene IDSed0017878
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG12:30606377..30608847
RNA-Seq ExpressionSed0017878
SyntenySed0017878
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]6.3e-13493.28Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFL+GSSG+LHR LSVKPV+A SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF  N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

XP_022921659.1 chlorophyll a-b binding protein 4, chloroplastic [Cucurbita moschata]7.4e-13594.47Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFLTGSSG+LHR LSVKPV A SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

XP_022987200.1 chlorophyll a-b binding protein 4, chloroplastic [Cucurbita maxima]2.5e-13594.86Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFLTGSSG+LHR LSVKPVAA SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]1.1e-13595.26Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFLTGSSG+LHR LSVKPVAA SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]9.7e-13593.68Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFL+GSSG+LHR+LSVKPV+A SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF  N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

TrEMBL top hitse value%identityAlignment
A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic3.0e-13493.28Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFL+GSSG+LHR LSVKPV+A SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF  N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic3.0e-13493.28Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFL+GSSG+LHR LSVKPV+A SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF  N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

A0A6J1BZ19 Chlorophyll a-b binding protein, chloroplastic2.0e-13393.28Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCA+RSRFL+GSS +LHR+LSVKPVAA  SSSSLKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF  N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

A0A6J1E151 Chlorophyll a-b binding protein, chloroplastic3.6e-13594.47Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFLTGSSG+LHR LSVKPV A SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic1.2e-13594.86Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAAVF PCAARSRFLTGSSG+LHR LSVKPVAA SSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+APQW+DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic5.6e-6147.51Show/hide
Query:  TTQASAAVFLPCAARSRFLTGSS------GRLHR--DLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAE
        +T A+ A   P + R+  + G++      GR  R    S  P A S+++  +  +  +  W PG   P +L+GSLPGD GFDPL LA DPE+LRW  QAE
Subjt:  TTQASAAVFLPCAARSRFLTGSS------GRLHR--DLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAE

Query:  LVNGRWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF
        LV+ RWAMLG AG+ +PE+LTKIGI++ P W+ AG+ EYF  ++TLF++E +L  + E RRW DI  PG VN DPIF    L   + GYPGG+ F+PL +
Subjt:  LVNGRWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF

Query:  APTSEAK-----EKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
           S AK      KEI NGRLAMLA +G   QH  TG GP +NL  H++DP H TI   FS
Subjt:  APTSEAK-----EKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

P27521 Chlorophyll a-b binding protein 4, chloroplastic5.5e-12584.06Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTT ASA++F PC ++ RFLTGSSGRL+RDLS   + +S+ +SS KVEAKKGEWLPGL SP YL GSL GDNGFDPL LAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+ P+W+DAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  E GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQTF+
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)2.9e-8973.27Show/hide
Query:  PVAASSSSSSLKVEA--KKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIGIIDAPQWFD-AGKAE
        P A+ S  S+ +  A   KG WLPGL SPAYL+GSL GDNGFDPL+LAEDPE+LRWFVQA++VNGRWAMLGVAGML+PEVLTK G+++AP+W    GK  
Subjt:  PVAASSSSSSLKVEA--KKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIGIIDAPQWFD-AGKAE

Query:  YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENL
        YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP+ECGYPG +FNPLNFAP  E KEKE+ANGRLAMLAFLGF+VQHNV GKGPFENL
Subjt:  YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENL

Query:  LQHISDPWHNTIVQTFS
         QH++DPWHNTI+QT S
Subjt:  LQHISDPWHNTIVQTFS

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic3.4e-12283.79Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTTQASAA+F PC  +SRFL GSSG+L+R ++ +PV   S S+S KVEAKKGEWLPGL SP YL GSLPGDNGFDPL LAEDPENLRWFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV T IGII+ P+W+ AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  E GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
        AKEKEIANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQT   N
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic4.3e-6149.79Show/hide
Query:  FLTGSSGRLHRDLSVKPVAASSSS-SSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIG
        FL G   RL + L+V  V+   +S  ++  +  +  W PG   P +L+GSLPGD GFDPL L+ DP++L+W VQAE+V+ RWAMLG AG+ +PE LTKIG
Subjt:  FLTGSSGRLHRDLSVKPVAASSSS-SSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIG

Query:  IIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNFAPTSEAK-----EKEIANGRLAML
        I++ P W+ AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   + GYPGG+ F+PL +   S AK      KEI NGRLAML
Subjt:  IIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNFAPTSEAK-----EKEIANGRLAML

Query:  AFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        A +G   QH  TG GP +NL  H++DP H TI   F+
Subjt:  AFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 66.9e-5441.6Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSS--GRLHRDLSVKPVAASSSSSSLK-VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAEL
        + +  T +++ V  P   R    + SS  GRL R+  V   A    SS  + +   +  W PG   P +L+GSLPGD GFDPL L  DP+ L+WF QAEL
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSS--GRLHRDLSVKPVAASSSSSSLK-VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAEL

Query:  VNGRWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNF--
        ++ RWAML V G+++PE L ++G I+   W+DAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +     P  + GYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNF--

Query:  ----APTSEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN
             P    + KEI NGRLAMLAFLGF  Q   T + P ENL+ H++DP H  +   F+++
Subjt:  ----APTSEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN

AT1G45474.1 photosystem I light harvesting complex gene 51.1e-5445.87Show/hide
Query:  LTGSSGRLHRDLS------VKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVL
        +TG      RD S      +  V A+    +  V  ++  WLPGL  P YL+G+L GD GFDPL L EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++L
Subjt:  LTGSSGRLHRDLS------VKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVL

Query:  TKIGIIDAPQWFDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAP----TSEAKEKEIA
           GI + P W++AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A       + K KEI 
Subjt:  TKIGIIDAPQWFDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAP----TSEAKEKEIA

Query:  NGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQT
        NGRLAM+A LGF VQ +VT  GP +NL++H+S+PWH TI+QT
Subjt:  NGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQT

AT1G45474.2 photosystem I light harvesting complex gene 51.1e-5445.87Show/hide
Query:  LTGSSGRLHRDLS------VKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVL
        +TG      RD S      +  V A+    +  V  ++  WLPGL  P YL+G+L GD GFDPL L EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++L
Subjt:  LTGSSGRLHRDLS------VKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVL

Query:  TKIGIIDAPQWFDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAP----TSEAKEKEIA
           GI + P W++AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A       + K KEI 
Subjt:  TKIGIIDAPQWFDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAP----TSEAKEKEIA

Query:  NGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQT
        NGRLAM+A LGF VQ +VT  GP +NL++H+S+PWH TI+QT
Subjt:  NGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A43.9e-12684.06Show/hide
Query:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG
        MATVTT ASA++F PC ++ RFLTGSSGRL+RDLS   + +S+ +SS KVEAKKGEWLPGL SP YL GSL GDNGFDPL LAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE
        RWAMLGVAGMLLPEV TKIGII+ P+W+DAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  E GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQTF+
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

AT3G61470.1 photosystem I light harvesting complex gene 23.1e-6249.79Show/hide
Query:  FLTGSSGRLHRDLSVKPVAASSSS-SSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIG
        FL G   RL + L+V  V+   +S  ++  +  +  W PG   P +L+GSLPGD GFDPL L+ DP++L+W VQAE+V+ RWAMLG AG+ +PE LTKIG
Subjt:  FLTGSSGRLHRDLSVKPVAASSSS-SSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIG

Query:  IIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNFAPTSEAK-----EKEIANGRLAML
        I++ P W+ AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   + GYPGG+ F+PL +   S AK      KEI NGRLAML
Subjt:  IIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNFAPTSEAK-----EKEIANGRLAML

Query:  AFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        A +G   QH  TG GP +NL  H++DP H TI   F+
Subjt:  AFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGTCACTACTCAAGCCTCCGCCGCCGTTTTCCTGCCATGCGCCGCCCGGTCGAGGTTTCTCACCGGTTCTTCCGGTAGACTCCACCGTGACCTGTCGGTTAA
ACCGGTGGCTGCCTCGTCGTCTTCTTCGTCTCTCAAGGTTGAAGCTAAGAAGGGAGAGTGGTTGCCTGGTTTGCCGTCTCCGGCTTACTTAAATGGAAGCCTTCCAGGCG
ACAATGGATTCGACCCACTGAGTCTAGCAGAGGACCCAGAGAACTTGCGATGGTTCGTACAAGCCGAGCTCGTAAACGGGCGGTGGGCGATGTTGGGAGTGGCTGGAATG
CTGCTGCCCGAGGTTCTCACGAAGATCGGAATCATCGACGCCCCGCAATGGTTCGACGCGGGGAAAGCTGAGTACTTCGCCTCGTCTTCGACCCTGTTCGTGATCGAGTT
CATCCTGTTCCATTACGTCGAAATTCGAAGATGGCAGGACATTAAGAACCCTGGCAGTGTGAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCCCAAATGAATGTG
GGTACCCTGGTGGCATTTTTAACCCTCTTAACTTTGCCCCTACATCGGAAGCTAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCGTTCTTGGGGTTCATA
GTGCAACACAATGTGACAGGGAAGGGGCCATTTGAGAACCTTTTGCAGCACATTTCTGATCCATGGCACAACACCATTGTCCAAACCTTCAGCGCCAACTAA
mRNA sequenceShow/hide mRNA sequence
CGAACAAGAACCACAAACTTGGCATTGAAGCGAAGTTACAAAGCTCTGCAAATTACTCCCAAATTTCTTACTCCTGAATATCCCTTTTCTTCCTCAACACTAAAAAAAAG
AAAAATTCAGGAGCAATGGCCACCGTCACTACTCAAGCCTCCGCCGCCGTTTTCCTGCCATGCGCCGCCCGGTCGAGGTTTCTCACCGGTTCTTCCGGTAGACTCCACCG
TGACCTGTCGGTTAAACCGGTGGCTGCCTCGTCGTCTTCTTCGTCTCTCAAGGTTGAAGCTAAGAAGGGAGAGTGGTTGCCTGGTTTGCCGTCTCCGGCTTACTTAAATG
GAAGCCTTCCAGGCGACAATGGATTCGACCCACTGAGTCTAGCAGAGGACCCAGAGAACTTGCGATGGTTCGTACAAGCCGAGCTCGTAAACGGGCGGTGGGCGATGTTG
GGAGTGGCTGGAATGCTGCTGCCCGAGGTTCTCACGAAGATCGGAATCATCGACGCCCCGCAATGGTTCGACGCGGGGAAAGCTGAGTACTTCGCCTCGTCTTCGACCCT
GTTCGTGATCGAGTTCATCCTGTTCCATTACGTCGAAATTCGAAGATGGCAGGACATTAAGAACCCTGGCAGTGTGAACCAAGACCCCATTTTCAAGCAGTACAGTTTGC
CCCCAAATGAATGTGGGTACCCTGGTGGCATTTTTAACCCTCTTAACTTTGCCCCTACATCGGAAGCTAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCG
TTCTTGGGGTTCATAGTGCAACACAATGTGACAGGGAAGGGGCCATTTGAGAACCTTTTGCAGCACATTTCTGATCCATGGCACAACACCATTGTCCAAACCTTCAGCGC
CAACTAAAATTTGGGGTTTGAAACTCAAAGTTGTTTGTGATGAATTGAAATTCTTTAAGAGAGGTTGTTTTTGGGGATTAGTGTGTTGCAACATAGTGGATATCAGTGTA
TGTACAGGGATGTTGTTTTAATGACATGATCCTTCAACTTGACGTTATGAATTTTATCTTGCTTAATTAAACATTCACACTTTCAATCATTTTGTAGTTCTTATGAACTT
TTAAGAATTTTACACTCAAGTTTAGCAGGATGAAGTACTTTAAAGTTGTGAAGAATGTTGGTAGATGAGAG
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFLPCAARSRFLTGSSGRLHRDLSVKPVAASSSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGM
LLPEVLTKIGIIDAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTSEAKEKEIANGRLAMLAFLGFI
VQHNVTGKGPFENLLQHISDPWHNTIVQTFSAN