CuGenDBv2

Gene ID	Sed0017896
Organism	Sechium edule (Chayote v1)
Description	Endoplasmic reticulum transmembrane protein
Genome location	LG06:1187150..1187873
RNA-Seq Expression	Sed0017896
Synteny	Sed0017896
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0070973 - protein localization to endoplasmic reticulum exit site (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008417 - B-cell receptor-associated protein 29/31

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040998.1 Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa]

2.6e-59

93.08

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLD LRKGLIAVTRNLLKPFLS+VPFC+FLLMDIYWKYE  PTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

XP_004142369.2 uncharacterized protein LOC101213354 [Cucumis sativus]

3.4e-59

92.31

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLD LRKGL+AVTRNLLKPFLS+VPFC+FLLMDIYWKYE  PTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

XP_022153951.1 uncharacterized protein LOC111021338 [Momordica charantia]

2.2e-58

91.54

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLT+PGLD LRKGLIAVTRNLLKPFLS+VPFCLFLLMDIYWKYE  P+CESDSCTPSE+LRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

XP_022942023.1 uncharacterized protein LOC111447211 [Cucurbita moschata]

1.5e-59

93.85

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLD LRKGLIAVTRNLLKPFLS+VPFCLFLLMDIYWKYE  PTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

XP_022943230.1 uncharacterized protein LOC111448022 [Cucurbita moschata]

6.4e-58

89.23

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIM+LLLT+PGLD LRKGLIAVTRNLLKPFLS+VPFCLFLLMDIYWKYE LP+CESDSCTPSE+LRHQKSIMKSQRNALLIA+AL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHL+VKVEQLNQR+ERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTU7 Endoplasmic reticulum transmembrane protein

1.7e-59

92.31

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLD LRKGL+AVTRNLLKPFLS+VPFC+FLLMDIYWKYE  PTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

A0A5A7TDF8 Endoplasmic reticulum transmembrane protein

1.3e-59

93.08

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLD LRKGLIAVTRNLLKPFLS+VPFC+FLLMDIYWKYE  PTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

A0A6J1DM88 Endoplasmic reticulum transmembrane protein

1.1e-58

91.54

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLT+PGLD LRKGLIAVTRNLLKPFLS+VPFCLFLLMDIYWKYE  P+CESDSCTPSE+LRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

A0A6J1FTP8 Endoplasmic reticulum transmembrane protein

7.4e-60

93.85

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLD LRKGLIAVTRNLLKPFLS+VPFCLFLLMDIYWKYE  PTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

A0A6J1IKB0 Endoplasmic reticulum transmembrane protein

7.4e-60

93.85

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLD LRKGLIAVTRNLLKPFLS+VPFCLFLLMDIYWKYE  PTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYW+L+SVTHLVVKVEQLNQRVERL+NRD
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G48440.1 B-cell receptor-associated 31-like

2.5e-20

39.37

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MAL+W++L Y  A E ++ L+LTLP    L+K ++ +   +L+P  SIV F  F L+DIYWK E+  +C S+ CT +E  R++KSI K+QRN +L AA +
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLR
        + YW ++ +      +E+L    +R +
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLR

AT3G03160.1 FUNCTIONS IN: molecular_function unknown

7.3e-60

86.15

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMV+LLT+PGLD LRKGL+AVTRNLLKPFLSIVPFCLFLLMDIYWKYE +P+C+ DSCTPSE+LRHQKS+MKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYWIL+SVT+LVVK+E LNQR+ERLRN+D
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

AT3G17780.1 FUNCTIONS IN: molecular_function unknown

1.8e-21

40.62

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MAL+W++L Y  AAE  + ++LTLP    L+K ++++   +L P  SIV F  F L+DIYWK E+   C S+ CT +E  RH+KS+ K+QRN +L AA +
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRN
        + YW +F +      +E+L Q  +R ++
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRN

AT5G17190.1 FUNCTIONS IN: molecular_function unknown

7.3e-60

86.15

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMV+LLT+PGLDALRKGL+AVTRNLLKPFLSI+PFCLFLLMDIYWKYE  P+C+ DSCTPSE+LRHQKSIMKSQRNALLIA+AL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD
        +FYWIL+SVT+LVV++EQLNQRVERL+N+D
Subjt:  MFYWILFSVTHLVVKVEQLNQRVERLRNRD

Sequences

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CDS sequence

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ATGGCGTTAGAATGGGTGGTTCTGGGCTACGCCGCCGCCGCGGAGGCGATCATGGTCCTCCTCCTCACCCTCCCCGGCCTGGACGCCCTCCGCAAGGGCCTAATCGCCGT
CACTCGCAACCTCCTCAAGCCGTTCCTCTCCATCGTCCCCTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAATACGAGAATCTCCCCACCTGCGAGTCCGATTCCT
GCACCCCTTCCGAGTACCTCCGCCACCAGAAATCCATCATGAAGAGCCAGCGAAACGCGCTCCTGATCGCTGCCGCCCTCATGTTTTACTGGATCTTGTTCTCGGTTACG
CATTTGGTTGTTAAGGTCGAGCAGCTGAACCAGCGTGTTGAGCGGTTGAGGAATCGGGATTGA

mRNA sequence

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GTTAAATTCCCAAAAACCAACCCTTCTTCTTCTTCTTCTTCAGAAATCAAAATCCTTCGTCTCGAAGAAAAGCATTCAATTCCGTTTCTCAGATCTGTGATCAATGGCGT
TAGAATGGGTGGTTCTGGGCTACGCCGCCGCCGCGGAGGCGATCATGGTCCTCCTCCTCACCCTCCCCGGCCTGGACGCCCTCCGCAAGGGCCTAATCGCCGTCACTCGC
AACCTCCTCAAGCCGTTCCTCTCCATCGTCCCCTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAATACGAGAATCTCCCCACCTGCGAGTCCGATTCCTGCACCCC
TTCCGAGTACCTCCGCCACCAGAAATCCATCATGAAGAGCCAGCGAAACGCGCTCCTGATCGCTGCCGCCCTCATGTTTTACTGGATCTTGTTCTCGGTTACGCATTTGG
TTGTTAAGGTCGAGCAGCTGAACCAGCGTGTTGAGCGGTTGAGGAATCGGGATTGAGGATTGGAGATCGAAGGCGATTCCTCAATTGGGTCTGTTTTCTTTTTTTCTTTT
TTTTCTTTTTTTTTTTTTAATTTTGGTTTTTTGATGCTATATCATGGAAATTGCAGCTTGTTTTGTATCACGCTTTGATACTGCTATTATATACTTTGAAACTGTTATGA
TGATACTACCTCTTGGATGTCTTTAGCGTCTGATTTGAATGTTTGTGGAAATGGCGATCTAGGG

Protein sequence

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MALEWVVLGYAAAAEAIMVLLLTLPGLDALRKGLIAVTRNLLKPFLSIVPFCLFLLMDIYWKYENLPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALMFYWILFSVT
HLVVKVEQLNQRVERLRNRD

Sed0017896 (gene) of Chayote v1 genome