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Sed0017915 (gene) of Chayote v1 genome

Gene IDSed0017915
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF hand family protein
Genome locationLG06:6171605..6172012
RNA-Seq ExpressionSed0017915
SyntenySed0017915
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8398532.1 hypothetical protein HHK36_017462 [Tetracentron sinense]1.4e-1843.8Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLS---EVVCHKFQVGKDGGIDEKEFKCVVTEILLAM
        MSV+ LN  TVT F+ D++ FD C+   F  LD + DG L+ +EL  G  +  +     +SE+++S    +V  KF   ++G ID +EF+  + EI+LA+
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLS---EVVCHKFQVGKDGGIDEKEFKCVVTEILLAM

Query:  ANGIGNLPLQVALQQDSLLMKAVELEKVKERKLGNSI
        A GIGN P+QVAL+ DSLLM+AVE E +K R +G S+
Subjt:  ANGIGNLPLQVALQQDSLLMKAVELEKVKERKLGNSI

TYJ95513.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]4.2e-4477.52Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTVTNFI DTK+FD CVKESFKKLD+D DGFLN NEL+ G  +QP E  LMD  DDL EVVCHKF V K GGIDE EFK VV +ILLAMA G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKERK
        IGN PLQVALQQDS LMKAVELEK KE+K
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKERK

XP_004142569.1 uncharacterized protein LOC101222885 [Cucumis sativus]5.3e-4779.07Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTVTNFI DTK+FD CVKESFKKLD D DGFLN+NEL+VG R+ P EF LMD  DDLSEVVCHKFQV K GGIDE+EFK V+ +ILLAMA G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKERK
        IGN PLQVALQQDS LMKAVELEK +E+K
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKERK

XP_008462771.1 PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]1.4e-4477.52Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTVTNFI DTK+FD CVKESFKKLD+D DGFLN NEL+ G  +QP E  LMD  DDL EVVCHKF V K GGIDEKEFK V+ +ILLAMA G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKERK
        IGN PLQVALQQDS LMKAVELEK KE+K
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKERK

XP_022158640.1 uncharacterized protein LOC111025096 [Momordica charantia]1.2e-3570.08Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTV +FI DTK+FD CVKESF+KLD DKDG LN NEL  G R+        D  DDLS+ VC KF V K GGI+E EFK VVTEILLA+A G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKE
        IGNLPLQVALQQD LLMKAVE E+ KE
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKE

TrEMBL top hitse value%identityAlignment
A0A0A0LYD8 Uncharacterized protein2.6e-4779.07Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTVTNFI DTK+FD CVKESFKKLD D DGFLN+NEL+VG R+ P EF LMD  DDLSEVVCHKFQV K GGIDE+EFK V+ +ILLAMA G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKERK
        IGN PLQVALQQDS LMKAVELEK +E+K
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKERK

A0A1S3CI80 uncharacterized protein LOC1035010587.0e-4577.52Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTVTNFI DTK+FD CVKESFKKLD+D DGFLN NEL+ G  +QP E  LMD  DDL EVVCHKF V K GGIDEKEFK V+ +ILLAMA G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKERK
        IGN PLQVALQQDS LMKAVELEK KE+K
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKERK

A0A5A7VAA7 Calcium-binding EF hand family protein7.0e-4577.52Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTVTNFI DTK+FD CVKESFKKLD+D DGFLN NEL+ G  +QP E  LMD  DDL EVVCHKF V K GGIDEKEFK V+ +ILLAMA G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKERK
        IGN PLQVALQQDS LMKAVELEK KE+K
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKERK

A0A5D3B8A7 Calcium-binding EF hand family protein2.0e-4477.52Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTVTNFI DTK+FD CVKESFKKLD+D DGFLN NEL+ G  +QP E  LMD  DDL EVVCHKF V K GGIDE EFK VV +ILLAMA G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKERK
        IGN PLQVALQQDS LMKAVELEK KE+K
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKERK

A0A6J1DWE2 uncharacterized protein LOC1110250965.9e-3670.08Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG
        MSVAFLNDTTV +FI DTK+FD CVKESF+KLD DKDG LN NEL  G R+        D  DDLS+ VC KF V K GGI+E EFK VVTEILLA+A G
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANG

Query:  IGNLPLQVALQQDSLLMKAVELEKVKE
        IGNLPLQVALQQD LLMKAVE E+ KE
Subjt:  IGNLPLQVALQQDSLLMKAVELEKVKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.0e-1137.01Show/hide
Query:  LNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRN---QPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANGIG
        +   T+  F+ DTK F++   + F+ LD DK+G L+ +EL+ GL N     SE    D  D++   +  +F  G+D  +  K F+ ++ EIL AMA GIG
Subjt:  LNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRN---QPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANGIG

Query:  NLPLQVALQQDSLLMKAVELEKVKERK
        N P+ + +  D L+MKAV L + K+ K
Subjt:  NLPLQVALQQDSLLMKAVELEKVKERK

AT2G34030.1 Calcium-binding EF-hand family protein4.5e-0432.91Show/hide
Query:  DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSE-DDLSEVVCHKFQVGKDGGIDEKEFKCVVTEIL
        D +L    +K  FKK DK+KDG + ++EL+  L  + S FG M  + ++L++     F    DG ++E EF+  +  +L
Subjt:  DTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSE-DDLSEVVCHKFQVGKDGGIDEKEFKCVVTEIL

AT2G44310.1 Calcium-binding EF-hand family protein1.3e-1133.09Show/hide
Query:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQ---VGLRNQPSEFGL-----MDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTE
        M V  ++ +TV +F+ D + F   V E F  LD +KDG L+ +EL+     +R   S FG+      D   +L + +  KF   + G +D +EF+  + +
Subjt:  MSVAFLNDTTVTNFI-DTKLFDACVKESFKKLDKDKDGFLNVNELQ---VGLRNQPSEFGL-----MDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTE

Query:  ILLAMANGIGNLPLQVAL--QQDSLLMKAVELEKVKERK
        I+LA+A+G+G+ P+ + L    D+ L KA +LE  K  K
Subjt:  ILLAMANGIGNLPLQVAL--QQDSLLMKAVELEKVKERK

AT4G38810.2 Calcium-binding EF-hand family protein1.8e-0837.62Show/hide
Query:  KLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGL------MDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANGIGNLPLQVALQQ
        K+FD  V++ F++LD+D+DG L+V ELQ  + +  +  GL       DS+   SEV+ ++F  G    + + EFK V+++ILL MA G+   P+ V L+ 
Subjt:  KLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGL------MDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANGIGNLPLQVALQQ

Query:  D
        D
Subjt:  D


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTAGCTTTTCTCAACGACACGACAGTGACGAATTTCATCGACACAAAGTTATTCGACGCTTGTGTGAAGGAGAGTTTTAAGAAGCTCGACAAGGACAAAGATGG
CTTCCTCAACGTGAATGAGCTTCAAGTCGGGCTTCGTAACCAGCCATCGGAGTTCGGACTGATGGATTCCGAGGACGATCTGTCCGAGGTTGTTTGTCATAAGTTTCAGG
TGGGAAAAGATGGTGGGATTGATGAAAAAGAGTTCAAGTGTGTAGTAACGGAAATTCTACTTGCAATGGCTAATGGGATTGGAAACTTGCCCCTCCAAGTTGCACTTCAA
CAAGATAGCCTTCTCATGAAGGCTGTTGAACTGGAAAAGGTCAAAGAAAGAAAATTAGGAAATTCAATTCCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTAGCTTTTCTCAACGACACGACAGTGACGAATTTCATCGACACAAAGTTATTCGACGCTTGTGTGAAGGAGAGTTTTAAGAAGCTCGACAAGGACAAAGATGG
CTTCCTCAACGTGAATGAGCTTCAAGTCGGGCTTCGTAACCAGCCATCGGAGTTCGGACTGATGGATTCCGAGGACGATCTGTCCGAGGTTGTTTGTCATAAGTTTCAGG
TGGGAAAAGATGGTGGGATTGATGAAAAAGAGTTCAAGTGTGTAGTAACGGAAATTCTACTTGCAATGGCTAATGGGATTGGAAACTTGCCCCTCCAAGTTGCACTTCAA
CAAGATAGCCTTCTCATGAAGGCTGTTGAACTGGAAAAGGTCAAAGAAAGAAAATTAGGAAATTCAATTCCAAAATAA
Protein sequenceShow/hide protein sequence
MSVAFLNDTTVTNFIDTKLFDACVKESFKKLDKDKDGFLNVNELQVGLRNQPSEFGLMDSEDDLSEVVCHKFQVGKDGGIDEKEFKCVVTEILLAMANGIGNLPLQVALQ
QDSLLMKAVELEKVKERKLGNSIPK