; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017933 (gene) of Chayote v1 genome

Gene IDSed0017933
OrganismSechium edule (Chayote v1)
Descriptionspindle pole body component 110-like isoform X1
Genome locationLG07:12453238..12458944
RNA-Seq ExpressionSed0017933
SyntenySed0017933
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600532.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]5.8e-5858.41Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ KKV           PDNHVLKRH S+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD
        AVM+R +    N   +YDS+ LK K   KR N+KW +EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RGF+E D+L           GD
Subjt:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD

Query:  SKGTLKKSVMELNNFDIGGLIDCRNV
        S+G LK+SVMEL  FDI GLIDCR +
Subjt:  SKGTLKKSVMELNNFDIGGLIDCRNV

XP_022980041.1 uncharacterized protein LOC111479556 isoform X1 [Cucurbita maxima]5.8e-5855.95Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ KKV           PDNHVLKRHFS+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L
        AVM+R          KY                 SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L
Subjt:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L

Query:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV
         SR RGF+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Subjt:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV

XP_022980049.1 uncharacterized protein LOC111479556 isoform X2 [Cucurbita maxima]5.8e-5855.95Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ KKV           PDNHVLKRHFS+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L
        AVM+R          KY                 SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L
Subjt:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L

Query:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV
         SR RGF+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Subjt:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV

XP_022980056.1 uncharacterized protein LOC111479556 isoform X3 [Cucurbita maxima]1.1e-5959.73Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ KKV           PDNHVLKRHFS+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD
        AVM+R + +  N   +YDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RGF+E D+L           GD
Subjt:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD

Query:  SKGTLKKSVMELNNFDIGGLIDCRNV
        S+G LK+SVMEL  FDI GLIDCR +
Subjt:  SKGTLKKSVMELNNFDIGGLIDCRNV

XP_023550796.1 uncharacterized protein LOC111808815 isoform X3 [Cucurbita pepo subsp. pepo]9.0e-5958.85Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ KKV           PDNHVLKRH S+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD
        AVM+R +    N   +YDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RGF+E D+L           GD
Subjt:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD

Query:  SKGTLKKSVMELNNFDIGGLIDCRNV
        S+G LK+SVMEL  FDI GLIDCR +
Subjt:  SKGTLKKSVMELNNFDIGGLIDCRNV

TrEMBL top hitse value%identityAlignment
A0A6J1FPK8 uncharacterized protein LOC111447644 isoform X32.8e-5858.41Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ KKV           PDNHVLKRH S+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD
        AVM+R +    N   +YDS+ LK K   KR N+KW +EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RGF+E D+L           GD
Subjt:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD

Query:  SKGTLKKSVMELNNFDIGGLIDCRNV
        S+G LK+SVMEL  FDI GLIDCR +
Subjt:  SKGTLKKSVMELNNFDIGGLIDCRNV

A0A6J1FWR7 uncharacterized protein LOC111447644 isoform X21.2e-5654.76Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+K+K+  +L +NDCE Y  E DD+KI+TL SET  KE+ KKV           PDNHVLKRH S+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L
        AVM+R          KY                 SD  IQ RYDS+ LK K   KR N+KW +EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L
Subjt:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L

Query:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV
         SR RGF+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Subjt:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV

A0A6J1ISG5 uncharacterized protein LOC111479556 isoform X12.8e-5855.95Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ KKV           PDNHVLKRHFS+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L
        AVM+R          KY                 SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L
Subjt:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L

Query:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV
         SR RGF+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Subjt:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV

A0A6J1ISI0 uncharacterized protein LOC111479556 isoform X35.2e-6059.73Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ KKV           PDNHVLKRHFS+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD
        AVM+R + +  N   +YDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L SR RGF+E D+L           GD
Subjt:  AVMVRVKYSDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-LSSRQRGFNEADML----------SGD

Query:  SKGTLKKSVMELNNFDIGGLIDCRNV
        S+G LK+SVMEL  FDI GLIDCR +
Subjt:  SKGTLKKSVMELNNFDIGGLIDCRNV

A0A6J1IY94 uncharacterized protein LOC111479556 isoform X22.8e-5855.95Show/hide
Query:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA
        MVE++SDDDHAP +N SRAR+KQK+  +L +NDCE Y  E DD+KI TL SET  KE+ KKV           PDNHVLKRHFS+ T DS+N  SSSRA 
Subjt:  MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAA

Query:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L
        AVM+R          KY                 SD  IQ RYDS+ LK K   KR N+KWE+EAEMRAAFDEND+LCMEAVCILY+QSS +GKP SA L
Subjt:  AVMVR---------VKY-----------------SDGNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSA-L

Query:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV
         SR RGF+E D+L           GDS+G LK+SVMEL  FDI GLIDCR +
Subjt:  SSRQRGFNEADML----------SGDSKGTLKKSVMELNNFDIGGLIDCRNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53220.1 unknown protein6.3e-1035.25Show/hide
Query:  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD--
        D +++  S    +  + V+ SDG +      SRL+  K  EKR   KWE EA+M A F ++  LCM AVC+L++ Q+       S+  S  RGF++ D  
Subjt:  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD--

Query:  --------MLSGDSKGTLKKSVMELNNFDIGGLIDCRNV
                +  GDS G +KKSV EL  FD  G+  C  +
Subjt:  --------MLSGDSKGTLKKSVMELNNFDIGGLIDCRNV

AT5G53220.2 unknown protein6.3e-1035.25Show/hide
Query:  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD--
        D +++  S    +  + V+ SDG +      SRL+  K  EKR   KWE EA+M A F ++  LCM AVC+L++ Q+       S+  S  RGF++ D  
Subjt:  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD--

Query:  --------MLSGDSKGTLKKSVMELNNFDIGGLIDCRNV
                +  GDS G +KKSV EL  FD  G+  C  +
Subjt:  --------MLSGDSKGTLKKSVMELNNFDIGGLIDCRNV

AT5G53220.3 unknown protein6.3e-1035.25Show/hide
Query:  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD--
        D +++  S    +  + V+ SDG +      SRL+  K  EKR   KWE EA+M A F ++  LCM AVC+L++ Q+       S+  S  RGF++ D  
Subjt:  DSENASSSSRAAAVMVRVKYSDGNIQKRYDSSRLKL-KDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYK-QSSPIGKPSSALSSRQRGFNEAD--

Query:  --------MLSGDSKGTLKKSVMELNNFDIGGLIDCRNV
                +  GDS G +KKSV EL  FD  G+  C  +
Subjt:  --------MLSGDSKGTLKKSVMELNNFDIGGLIDCRNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGGTCATGAGTGATGATGATCATGCCCCAGCGGAAAATTTATCTAGAGCACGCAAAAAACAAAAGAAAAAAGGGAATTTGTCAGTAAATGATTGTGAAGGTTA
TGGTGCTGAAAGTGATGATGATAAGATAACCACTCTCTCCAGTGAAACTACGGTTAAGGAATCAGGGAAGAAAGTAAGGGGCAATGTTCACGAAACCTCCACACAGTGTC
CAGATAATCATGTTTTGAAAAGGCATTTTTCTTCAGGTACTGGTGATTCTGAAAATGCCAGTTCCTCTTCAAGGGCCGCTGCAGTCATGGTGAGGGTAAAATATTCTGAT
GGCAATATTCAAAAGAGATATGACTCGAGTCGTCTTAAGTTAAAGGACCTAGAGAAGAGGTGTAATGAAAAATGGGAAGCGGAGGCTGAAATGCGTGCTGCATTTGATGA
AAATGATTTGTTGTGCATGGAGGCTGTTTGTATCCTCTATAAACAATCAAGTCCAATAGGAAAGCCAAGTAGTGCATTGTCTTCCAGACAAAGAGGATTTAATGAGGCTG
ATATGCTCAGCGGAGATTCAAAAGGGACATTGAAGAAATCTGTGATGGAGCTGAATAACTTCGACATAGGTGGTCTTATTGACTGTCGAAACGTTGGAAATGTGAGCGTC
TCCATATCTTCTGCATGTTCGTTCCCATCTTCTCTTCATTTTCCTCACAGTGATTCTGCCATTCAAGCCTTCTCTTTCGTCTCCTTGAAGAAGACCGAACGATTTGTTCT
TCGAGTAGTTTATTCTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGGTCATGAGTGATGATGATCATGCCCCAGCGGAAAATTTATCTAGAGCACGCAAAAAACAAAAGAAAAAAGGGAATTTGTCAGTAAATGATTGTGAAGGTTA
TGGTGCTGAAAGTGATGATGATAAGATAACCACTCTCTCCAGTGAAACTACGGTTAAGGAATCAGGGAAGAAAGTAAGGGGCAATGTTCACGAAACCTCCACACAGTGTC
CAGATAATCATGTTTTGAAAAGGCATTTTTCTTCAGGTACTGGTGATTCTGAAAATGCCAGTTCCTCTTCAAGGGCCGCTGCAGTCATGGTGAGGGTAAAATATTCTGAT
GGCAATATTCAAAAGAGATATGACTCGAGTCGTCTTAAGTTAAAGGACCTAGAGAAGAGGTGTAATGAAAAATGGGAAGCGGAGGCTGAAATGCGTGCTGCATTTGATGA
AAATGATTTGTTGTGCATGGAGGCTGTTTGTATCCTCTATAAACAATCAAGTCCAATAGGAAAGCCAAGTAGTGCATTGTCTTCCAGACAAAGAGGATTTAATGAGGCTG
ATATGCTCAGCGGAGATTCAAAAGGGACATTGAAGAAATCTGTGATGGAGCTGAATAACTTCGACATAGGTGGTCTTATTGACTGTCGAAACGTTGGAAATGTGAGCGTC
TCCATATCTTCTGCATGTTCGTTCCCATCTTCTCTTCATTTTCCTCACAGTGATTCTGCCATTCAAGCCTTCTCTTTCGTCTCCTTGAAGAAGACCGAACGATTTGTTCT
TCGAGTAGTTTATTCTCGTTAA
Protein sequenceShow/hide protein sequence
MVEVMSDDDHAPAENLSRARKKQKKKGNLSVNDCEGYGAESDDDKITTLSSETTVKESGKKVRGNVHETSTQCPDNHVLKRHFSSGTGDSENASSSSRAAAVMVRVKYSD
GNIQKRYDSSRLKLKDLEKRCNEKWEAEAEMRAAFDENDLLCMEAVCILYKQSSPIGKPSSALSSRQRGFNEADMLSGDSKGTLKKSVMELNNFDIGGLIDCRNVGNVSV
SISSACSFPSSLHFPHSDSAIQAFSFVSLKKTERFVLRVVYSR