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Sed0017943 (gene) of Chayote v1 genome

Gene IDSed0017943
OrganismSechium edule (Chayote v1)
Descriptionanther-specific protein BCP1-like
Genome locationLG03:42433603..42433935
RNA-Seq ExpressionSed0017943
SyntenySed0017943
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016899951.1 PREDICTED: classical arabinogalactan protein 11-like [Cucumis melo]2.3e-2469.09Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+ A+VLFAVIGFACAA PAE+PKGSAD+A  GA LAP AD+ +GNT+GA AP   + VVE PVG PG+  A G  PA +P  GASA+KF AVAA
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFFF
        VAAVAGFFFF
Subjt:  VAAVAGFFFF

XP_022152212.1 anther-specific protein BCP1 [Momordica charantia]1.1e-2366.37Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADN--ADVGAILAPGADHTVGNTDG-AAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPA
        MARQFV  A+VLFAV+GFACAA PAE PK +A++  AD GA  APGAD+ +GNTDG AAAPGAG+ +VEGPVG PGA       PAESP  GA AVK  A
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADN--ADVGAILAPGADHTVGNTDG-AAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPA

Query:  VAAVAAVAGFFFF
        VA VAA+AGFF F
Subjt:  VAAVAAVAGFFFF

XP_022962552.1 anther-specific protein BCP1-like [Cucurbita moschata]2.2e-2264.22Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+LA+VLFA++GFA AA P+ESPKGSA+N DVG +LAPGAD  +GNTDG  A    D VVEGP+G PG  G   S PAE+P  GASAV+F   +A
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFF
        + AVAGFFF
Subjt:  VAAVAGFFF

XP_022997549.1 anther-specific protein BCP1-like [Cucurbita maxima]7.9e-2566.06Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+LA++LFA++GFACAA PAESPKGSA+N DVG +LAPGAD  +GNTDG  A    D VVEGP+G PG  G   S PAE+P  GASAV+  AVAA
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFF
        + AVAG+FF
Subjt:  VAAVAGFFF

XP_038885796.1 outer membrane protein H.8-like [Benincasa hispida]4.2e-2670.91Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+ A+VLFAVIGFACAA PAESPK SADNADVGA LAPGA++ +GNT+GA AP   + VVE P+G P A  A G  PAESP  GASAVKF A  A
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFFF
         AAVAGFFFF
Subjt:  VAAVAGFFFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQR1 Uncharacterized protein1.8e-2266.36Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+ A+VLFAVIGF CAA PAE+PKGSAD A VGA LAPGA++ +GNT+GA AP   + VVE PVG PGA  A G  PA +P   ASA++F A AA
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFFF
        V AVAGFFFF
Subjt:  VAAVAGFFFF

A0A1S4DVD7 classical arabinogalactan protein 11-like1.1e-2469.09Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+ A+VLFAVIGFACAA PAE+PKGSAD+A  GA LAP AD+ +GNT+GA AP   + VVE PVG PG+  A G  PA +P  GASA+KF AVAA
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFFF
        VAAVAGFFFF
Subjt:  VAAVAGFFFF

A0A6J1DFK4 anther-specific protein BCP15.5e-2466.37Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADN--ADVGAILAPGADHTVGNTDG-AAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPA
        MARQFV  A+VLFAV+GFACAA PAE PK +A++  AD GA  APGAD+ +GNTDG AAAPGAG+ +VEGPVG PGA       PAESP  GA AVK  A
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADN--ADVGAILAPGADHTVGNTDG-AAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPA

Query:  VAAVAAVAGFFFF
        VA VAA+AGFF F
Subjt:  VAAVAAVAGFFFF

A0A6J1HCZ7 anther-specific protein BCP1-like1.0e-2264.22Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+LA+VLFA++GFA AA P+ESPKGSA+N DVG +LAPGAD  +GNTDG  A    D VVEGP+G PG  G   S PAE+P  GASAV+F   +A
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFF
        + AVAGFFF
Subjt:  VAAVAGFFF

A0A6J1KBR3 anther-specific protein BCP1-like3.8e-2566.06Show/hide
Query:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA
        MARQFV+LA++LFA++GFACAA PAESPKGSA+N DVG +LAPGAD  +GNTDG  A    D VVEGP+G PG  G   S PAE+P  GASAV+  AVAA
Subjt:  MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAA

Query:  VAAVAGFFF
        + AVAG+FF
Subjt:  VAAVAGFFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGCCAATTTGTTATTCTCGCTGTCGTCCTCTTTGCTGTCATCGGCTTCGCCTGCGCTGCCAAGCCAGCAGAGTCTCCCAAGGGCTCTGCTGATAATGCCGACGT
CGGAGCTATCTTGGCTCCGGGTGCTGATCACACTGTTGGAAACACAGACGGGGCCGCAGCTCCTGGTGCTGGCGATGCCGTGGTTGAAGGCCCCGTCGGCGAACCTGGTG
CCGAAGGAGCTACCGGCTCTGCGCCTGCGGAATCACCCCACGGCGGTGCCTCTGCCGTGAAATTCCCTGCCGTTGCTGCCGTGGCTGCGGTTGCAGGCTTTTTCTTCTTC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACGCCAATTTGTTATTCTCGCTGTCGTCCTCTTTGCTGTCATCGGCTTCGCCTGCGCTGCCAAGCCAGCAGAGTCTCCCAAGGGCTCTGCTGATAATGCCGACGT
CGGAGCTATCTTGGCTCCGGGTGCTGATCACACTGTTGGAAACACAGACGGGGCCGCAGCTCCTGGTGCTGGCGATGCCGTGGTTGAAGGCCCCGTCGGCGAACCTGGTG
CCGAAGGAGCTACCGGCTCTGCGCCTGCGGAATCACCCCACGGCGGTGCCTCTGCCGTGAAATTCCCTGCCGTTGCTGCCGTGGCTGCGGTTGCAGGCTTTTTCTTCTTC
TAA
Protein sequenceShow/hide protein sequence
MARQFVILAVVLFAVIGFACAAKPAESPKGSADNADVGAILAPGADHTVGNTDGAAAPGAGDAVVEGPVGEPGAEGATGSAPAESPHGGASAVKFPAVAAVAAVAGFFFF