CuGenDBv2

Gene ID	Sed0017949
Organism	Sechium edule (Chayote v1)
Description	Myb_DNA-bind_3 domain-containing protein
Genome location	LG03:3272704..3278133
RNA-Seq Expression	Sed0017949
Synteny	Sed0017949
Gene Ontology terms	NA
InterPro domains	IPR024752 - Myb/SANT-like domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140924.1 uncharacterized protein LOC101213668 [Cucumis sativus]

2.5e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

XP_008456640.1 PREDICTED: uncharacterized protein LOC103496536 isoform X1 [Cucumis melo]

2.5e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

XP_016901970.1 PREDICTED: uncharacterized protein LOC103496536 isoform X2 [Cucumis melo]

2.5e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

XP_022992668.1 uncharacterized protein LOC111488942 isoform X1 [Cucurbita maxima]

1.4e-32

69.91

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALAVQARN NKI+RCFNENAYTAAC++VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGFQ                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         GLRGK +EMYD+
Subjt:  SGLRGKLMEMYDD

XP_038885642.1 uncharacterized protein LOC120075957 [Benincasa hispida]

2.5e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8L4 Myb_DNA-bind_3 domain-containing protein

1.2e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

A0A1S3C4E4 uncharacterized protein LOC103496536 isoform X1

1.2e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

A0A1S4E1W1 uncharacterized protein LOC103496536 isoform X2

1.2e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

A0A5A7SKV5 Myb_DNA-bind_3 domain-containing protein

1.2e-32

69.03

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALA+QARN NKIDRCFNENAYTAACI+VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGF+                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         G+RGK +EMYD+
Subjt:  SGLRGKLMEMYDD

A0A6J1JZW7 uncharacterized protein LOC111488942 isoform X1

7.0e-33

69.91

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA
        VA+DKCLIEALAVQARN NKI+RCFNENAYTAAC++VNS  NLNLNNQKVINRLKTIKKR+KVIK ILCRDGFQ                     AHPDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQ---------------------AHPDA

Query:  SGLRGKLMEMYDD
         GLRGK +EMYD+
Subjt:  SGLRGKLMEMYDD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02550.1 unknown protein

1.1e-27

53.98

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA
        V +DKCLIEALAVQA+N NK+D+CFN+ AYTAAC++VN+R NLNL +QK INRLKTIKKR++V++ IL RDGF                       +PDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA

Query:  SGLRGKLMEMYDD
           RGK +EMY++
Subjt:  SGLRGKLMEMYDD

AT4G02550.2 unknown protein

1.1e-27

53.98

Show/hide

Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA
        V +DKCLIEALAVQA+N NK+D+CFN+ AYTAAC++VN+R NLNL +QK INRLKTIKKR++V++ IL RDGF                       +PDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA

Query:  SGLRGKLMEMYDD
           RGK +EMY++
Subjt:  SGLRGKLMEMYDD

AT4G02550.3 unknown protein

1.1e-27

53.98

Show/hide

Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA
        V +DKCLIEALAVQA+N NK+D+CFN+ AYTAAC++VN+R NLNL +QK INRLKTIKKR++V++ IL RDGF                       +PDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA

Query:  SGLRGKLMEMYDD
           RGK +EMY++
Subjt:  SGLRGKLMEMYDD

AT4G02550.4 unknown protein

1.1e-27

53.98

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Query:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA
        V +DKCLIEALAVQA+N NK+D+CFN+ AYTAAC++VN+R NLNL +QK INRLKTIKKR++V++ IL RDGF                       +PDA
Subjt:  VAIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGF---------------------QAHPDA

Query:  SGLRGKLMEMYDD
           RGK +EMY++
Subjt:  SGLRGKLMEMYDD

Sequences

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CDS sequence

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ATGAATGAGCTCATAAAAACTATGGTTTGTGTGACATGTCTGATATTCCTTGATCTCTCAGCAGTTCTGAATGAATGTGCTCAAAACCTTGTTTGGTTTAAGCTGATGAC
TTGGAAGAGGAAGATGGTTACTCGGCTACTTTATCGACGAAGGAAGGCGTTTGGTTCTCGAGAAAGTAACCATAGAGAATATAGAAATTTTCTCGAGAAAAAAACCCTAC
TCTTCCCCAACGAAGCTTCACTGTTCGCCGTTGCCGCCATTTTCGCCATAACAAGATTCTCTCGTCGGCAATGTGATTCTCGCCTTTCAATCCATTTTCCAGATCTAGTT
GCAATTGACAAGTGCCTCATTGAAGCTCTTGCTGTTCAGGCTAGAAATAGGAATAAAATTGATAGATGCTTTAATGAAAATGCATATACTGCTGCATGTATTTCTGTCAA
TAGTCGTTCTAACTTAAACTTGAACAACCAGAAAGTTATCAACCGCCTAAAGACTATTAAGAAGAGGTTCAAGGTAATCAAGGTTATTCTTTGTCGAGACGGGTTTCAGG
CACATCCTGATGCGAGTGGACTCCGAGGTAAGCTGATGGAGATGTATGATGATTGA

mRNA sequence

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Protein sequence

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MNELIKTMVCVTCLIFLDLSAVLNECAQNLVWFKLMTWKRKMVTRLLYRRRKAFGSRESNHREYRNFLEKKTLLFPNEASLFAVAAIFAITRFSRRQCDSRLSIHFPDLV
AIDKCLIEALAVQARNRNKIDRCFNENAYTAACISVNSRSNLNLNNQKVINRLKTIKKRFKVIKVILCRDGFQAHPDASGLRGKLMEMYDD

Sed0017949 (gene) of Chayote v1 genome