; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017977 (gene) of Chayote v1 genome

Gene IDSed0017977
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG02:40314157..40325603
RNA-Seq ExpressionSed0017977
SyntenySed0017977
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4349753.1 hypothetical protein G4B88_029501, partial [Cannabis sativa]6.3e-2632.94Show/hide
Query:  PWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWSRSNHRPICIN
        PW+ GGDFN  +   EK GG++     M  F+ A++  +L D+GY    FTW N+      + +RLDRF  N+++  +FP+       +  S+HRP+   
Subjt:  PWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWSRSNHRPICIN

Query:  FEFNEIDNTGIGKSR-FQFEEYWFAELDCGEIVKQSW--EKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDLLKKGLRKR
         E N +      K R F+FE +W  + +C +IV QSW  + G + ES + +          L  W     K ++  I KL           LL  G+RK 
Subjt:  FEFNEIDNTGIGKSR-FQFEEYWFAELDCGEIVKQSW--EKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDLLKKGLRKR

Query:  IGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYITEDGCWDIVKLA
        +G+G     F  P + RP SF+ IS     TE  MV  +I  DG WDI  L+
Subjt:  IGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYITEDGCWDIVKLA

KAF4386840.1 hypothetical protein F8388_006795 [Cannabis sativa]5.5e-3031.51Show/hide
Query:  PWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWSRSNHRPICIN
        PWL  GDFN  +   EK GG + +   M+ FR+ ++   L D   S +  TW N    N  I +RLDR L  EE+   F     S L W  S+HR + ++
Subjt:  PWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWSRSNHRPICIN

Query:  FEFNEIDNTGIGKS----RFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDLLKKGLRK
             +D    GKS    RF FEE W  E +C EIV + W+  S       +R  I    +    W ++KK+    EI +          + +++ G R 
Subjt:  FEFNEIDNTGIGKS----RFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDLLKKGLRK

Query:  RIGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYITEDGCWDIVKLASVL-VEDVRWITSIPICKTNLKDNWLWHFSKDGLFSVKS
        RIGNG+   +   P + RP +FK    P L  E+  V      +G WD   + +V    D   I  +P  + +++D  LWH+S +G +SV+S
Subjt:  RIGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYITEDGCWDIVKLASVL-VEDVRWITSIPICKTNLKDNWLWHFSKDGLFSVKS

KAF7824053.1 hypothetical protein G2W53_022197 [Senna tora]3.3e-3030.67Show/hide
Query:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS
        ++ L +N D PWL  GDFN  M+  EK GG+ +  R+M+AFRDA N     D+G+    FTW+N       I +RLDR  A EE+   FP  + +H++  
Subjt:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS

Query:  RSNHRPICINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWE-KGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDL
         S+H  + I+F+     N    +  F+FEE W ++  C +++   W+   +  E +  + S+++F +  L           WR I K R      W   +
Subjt:  RSNHRPICINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWE-KGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDL

Query:  LKKGLRKRIGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYIT-EDGCWDIVKLASVLVEDVRWITSIPICKTNLKDNWLWHFSKDGLFSVKSA
        L+ G   R+GNG    I+    I      + +S   L ++  MV   I  E+  W    + S    + R I S+P+   N++D ++W F K   +SVKSA
Subjt:  LKKGLRKRIGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYIT-EDGCWDIVKLASVLVEDVRWITSIPICKTNLKDNWLWHFSKDGLFSVKSA

XP_010688579.1 PREDICTED: uncharacterized protein LOC104902491 [Beta vulgaris subsp. vulgaris]5.4e-2535.68Show/hide
Query:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS
        ++++  N++ P L  GDFN  +   EK GG     R M+AFR+A++   ++DLGY    FTW    +   LI +RLDR LANEE+C++FP+++  HL   
Subjt:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS

Query:  RSNHRPICINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNW-----GREKKKERWREISKLRDAIHLL
        RS+H P+ +    N  D    G+  F+FE  W ++ +CG+IV+ +W  G  GE M    S + F  + L +W     G  KK++        ++A+HLL
Subjt:  RSNHRPICINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNW-----GREKKKERWREISKLRDAIHLL

XP_021737580.1 uncharacterized protein LOC110704109 [Chenopodium quinoa]2.4e-2535.35Show/hide
Query:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS
        +K L N   + WLLGGDFN+ M   EK GG    +   + FR+A++  +L DLGY  + FTWSN     + I +RLD FLAN E+   FP    +HL   
Subjt:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS

Query:  RSNHRPI--CINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWG
        +S+H PI  CI    N        K  ++F+E W  + +C  I+ ++WE+G        L S IAF    L +W +EK  +  +E+   +  +  L G
Subjt:  RSNHRPI--CINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWG

TrEMBL top hitse value%identityAlignment
A0A7J6GWY1 Uncharacterized protein2.7e-3031.51Show/hide
Query:  PWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWSRSNHRPICIN
        PWL  GDFN  +   EK GG + +   M+ FR+ ++   L D   S +  TW N    N  I +RLDR L  EE+   F     S L W  S+HR + ++
Subjt:  PWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWSRSNHRPICIN

Query:  FEFNEIDNTGIGKS----RFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDLLKKGLRK
             +D    GKS    RF FEE W  E +C EIV + W+  S       +R  I    +    W ++KK+    EI +          + +++ G R 
Subjt:  FEFNEIDNTGIGKS----RFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDLLKKGLRK

Query:  RIGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYITEDGCWDIVKLASVL-VEDVRWITSIPICKTNLKDNWLWHFSKDGLFSVKS
        RIGNG+   +   P + RP +FK    P L  E+  V      +G WD   + +V    D   I  +P  + +++D  LWH+S +G +SV+S
Subjt:  RIGNGEDTPIFNSPLILRPWSFKTISTPCLGTERDMVKSYITEDGCWDIVKLASVL-VEDVRWITSIPICKTNLKDNWLWHFSKDGLFSVKS

A0A803LZT1 Uncharacterized protein1.4e-2635.35Show/hide
Query:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS
        +K L N    PWLLGGDFN+ +   EK GG    +   + FR+A++   L D+GY  + FTWSN     + I +RLDRFLAN E+   FP    +HL   
Subjt:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS

Query:  RSNHRPI--CINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWG
        +S+H PI  C+    N        K  ++FEE W  + +C  I+ ++WE+G        L S IAF    L +W +EK ++  +E+   +  +  L G
Subjt:  RSNHRPI--CINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWG

A0A803MS51 Uncharacterized protein2.4e-2636.87Show/hide
Query:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS
        +K L N+   PWL GGDFN+ +   EK GG    S   +  R+AV+  +L DLGY  + FTWSN    ++ I +RLDR+LAN E+  +FP+   SHL   
Subjt:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS

Query:  RSNHRPI--CINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWG
        +S+H PI  CI  E          K  ++FE  W  + +C EIV  +WE+G      + L S IAF   +L  W REK  +  +++   +  +  L G
Subjt:  RSNHRPI--CINFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWG

A0A803PRV5 Uncharacterized protein3.1e-2633.67Show/hide
Query:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS
        +KRL+     PW++GGDFN  + ++EK GG  + +  +  FR A++   LRD+GY  N +TW N   KNDLI++RLDR   N ++  +FP+ K  HL  +
Subjt:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS

Query:  RSNHRPICI--NFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLL
         S+H P+ +  +    ++ +    ++RF FE  W  + +C  IV+ +W K     S   L++ +     DL  W + K++E  R + +  D I LL
Subjt:  RSNHRPICI--NFEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLL

A0A803QMV0 Uncharacterized protein7.6e-2534.01Show/hide
Query:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS
        +KR+      PW +GGDFN  + + EK GG  +    +  FR A++   LRD+GY  + +TW N   KNDLI++RLDR   N E+  +FP+ K  HL  +
Subjt:  MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWS

Query:  RSNHRPICINFEFN---EIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLL
         S+H P+ +  E++   +  NT   ++RF FE  W  + +C  IV+  W++     +   L++ +    Q L  W + KK+E  R + +  D I LL
Subjt:  RSNHRPICINFEFN---EIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGACTTCATAATAATGATGACTCTCCTTGGTTACTTGGTGGTGACTTTAATGTGGCAATGTGGAAAGAGGAAAAAAGTGGAGGTTCCAATGAAATCAGCCGTAC
TATGGAAGCATTTCGTGATGCTGTTAATATTTTAAATCTTCGAGACCTCGGCTATTCTGATAATATCTTTACATGGTCCAATCGATGCACTAAAAATGATCTAATTTGGA
AACGGCTTGATCGTTTTCTGGCCAATGAGGAATTTTGTCATATCTTCCCTAACTACAAGGCATCTCACCTAGCTTGGTCTAGATCTAACCATCGTCCTATTTGTATCAAT
TTTGAATTTAATGAAATTGATAACACTGGAATTGGTAAATCCCGGTTTCAGTTTGAAGAGTATTGGTTTGCTGAGCTTGACTGTGGAGAGATAGTTAAACAAAGCTGGGA
AAAAGGTTCAATGGGAGAATCTATGGATCATTTAAGATCTTCTATTGCTTTTTTTCAGCAGGATCTTTTGAATTGGGGTAGAGAAAAGAAGAAGGAGAGGTGGAGGGAAA
TATCTAAACTTCGTGATGCCATACATTTATTATGGGGAAGAGATCTTTTGAAAAAGGGTTTGAGGAAGCGTATTGGTAATGGTGAAGATACGCCTATTTTTAACTCTCCT
TTGATTCTGAGGCCTTGGTCTTTCAAGACTATTTCTACCCCTTGTCTTGGAACAGAAAGAGATATGGTGAAAAGCTATATTACTGAAGATGGGTGTTGGGATATAGTTAA
ACTTGCCTCAGTTTTAGTGGAAGATGTTAGATGGATTACTTCTATTCCTATCTGCAAAACGAACTTAAAAGATAATTGGTTGTGGCATTTCTCCAAAGATGGTCTTTTTT
CTGTCAAGAGTGCTCGCAAGGACAAATTCTCTAAGCTCAATGTAGATGCATCTATTCCTTCGTGTGGATACAAGGTGGGTTGTGGAGCTGTTATTCGTGGTATGTGCCGT
GGAGCTTCAAGCTCTTTTCGCATTCAATCAATGGATGTGTTTTCAGCAGAGGCTTTTGAGTCTGATTCAAAATCTTTGGTTGAAGCAATTTGTAAAAAAGCAGCTGCTGA
ACTCAACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGACTTCATAATAATGATGACTCTCCTTGGTTACTTGGTGGTGACTTTAATGTGGCAATGTGGAAAGAGGAAAAAAGTGGAGGTTCCAATGAAATCAGCCGTAC
TATGGAAGCATTTCGTGATGCTGTTAATATTTTAAATCTTCGAGACCTCGGCTATTCTGATAATATCTTTACATGGTCCAATCGATGCACTAAAAATGATCTAATTTGGA
AACGGCTTGATCGTTTTCTGGCCAATGAGGAATTTTGTCATATCTTCCCTAACTACAAGGCATCTCACCTAGCTTGGTCTAGATCTAACCATCGTCCTATTTGTATCAAT
TTTGAATTTAATGAAATTGATAACACTGGAATTGGTAAATCCCGGTTTCAGTTTGAAGAGTATTGGTTTGCTGAGCTTGACTGTGGAGAGATAGTTAAACAAAGCTGGGA
AAAAGGTTCAATGGGAGAATCTATGGATCATTTAAGATCTTCTATTGCTTTTTTTCAGCAGGATCTTTTGAATTGGGGTAGAGAAAAGAAGAAGGAGAGGTGGAGGGAAA
TATCTAAACTTCGTGATGCCATACATTTATTATGGGGAAGAGATCTTTTGAAAAAGGGTTTGAGGAAGCGTATTGGTAATGGTGAAGATACGCCTATTTTTAACTCTCCT
TTGATTCTGAGGCCTTGGTCTTTCAAGACTATTTCTACCCCTTGTCTTGGAACAGAAAGAGATATGGTGAAAAGCTATATTACTGAAGATGGGTGTTGGGATATAGTTAA
ACTTGCCTCAGTTTTAGTGGAAGATGTTAGATGGATTACTTCTATTCCTATCTGCAAAACGAACTTAAAAGATAATTGGTTGTGGCATTTCTCCAAAGATGGTCTTTTTT
CTGTCAAGAGTGCTCGCAAGGACAAATTCTCTAAGCTCAATGTAGATGCATCTATTCCTTCGTGTGGATACAAGGTGGGTTGTGGAGCTGTTATTCGTGGTATGTGCCGT
GGAGCTTCAAGCTCTTTTCGCATTCAATCAATGGATGTGTTTTCAGCAGAGGCTTTTGAGTCTGATTCAAAATCTTTGGTTGAAGCAATTTGTAAAAAAGCAGCTGCTGA
ACTCAACTTCTAG
Protein sequenceShow/hide protein sequence
MKRLHNNDDSPWLLGGDFNVAMWKEEKSGGSNEISRTMEAFRDAVNILNLRDLGYSDNIFTWSNRCTKNDLIWKRLDRFLANEEFCHIFPNYKASHLAWSRSNHRPICIN
FEFNEIDNTGIGKSRFQFEEYWFAELDCGEIVKQSWEKGSMGESMDHLRSSIAFFQQDLLNWGREKKKERWREISKLRDAIHLLWGRDLLKKGLRKRIGNGEDTPIFNSP
LILRPWSFKTISTPCLGTERDMVKSYITEDGCWDIVKLASVLVEDVRWITSIPICKTNLKDNWLWHFSKDGLFSVKSARKDKFSKLNVDASIPSCGYKVGCGAVIRGMCR
GASSSFRIQSMDVFSAEAFESDSKSLVEAICKKAAAELNF