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Sed0017999 (gene) of Chayote v1 genome

Gene IDSed0017999
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:2065984..2066508
RNA-Seq ExpressionSed0017999
SyntenySed0017999
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4271074.1 unnamed protein product [Prunus armeniaca]7.4e-0461.9Show/hide
Query:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        +PA P   A  + +YGPL+L  LPKG  PPSGPSKGTNDVN+
Subjt:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS

KAG6578478.1 hypothetical protein SDJN03_22926, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1674.36Show/hide
Query:  KLVFVFALILSFSVSSSSSARLLRSRSLSAA-PEWKLDIPADPAATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        KL FVFA+IL F  +SSSSARLLR +SLSAA PE KLDIP    A LS EYGPL+LGFLPKG IPPSGPSKGTND N+
Subjt:  KLVFVFALILSFSVSSSSSARLLRSRSLSAA-PEWKLDIPADPAATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS

KAG6602588.1 hypothetical protein SDJN03_07821, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1870.11Show/hide
Query:  MANL----KLVFVFALILSFSVSSSSSARLLRSRSLS--AAPEWKLDIPADPAATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        MANL    K + V ALILS SVSSSSSARLLR  SLS  A P+ KLD PAD    L+ EYG LLLGFLPKGGIPPSGPSKGTN++NS
Subjt:  MANL----KLVFVFALILSFSVSSSSSARLLRSRSLS--AAPEWKLDIPADPAATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS

KGN45830.1 hypothetical protein Csa_005505 [Cucumis sativus]2.1e-1473.33Show/hide
Query:  FVFALILSFSVSSSSSARLLRSRSLSAAPEWKLDIPADPAATLSTEYGPLLLGFLPKGG-IPPSGPSKGTNDVNS
        F+F LIL  SV SSSSARLLR +SLS  P  KLDIPADPAA   TEY  LLLGFLPKGG IPPSGPSKGTN+ N+
Subjt:  FVFALILSFSVSSSSSARLLRSRSLSAAPEWKLDIPADPAATLSTEYGPLLLGFLPKGG-IPPSGPSKGTNDVNS

XP_028778859.1 uncharacterized protein LOC114735338 [Prosopis alba]7.4e-0475.86Show/hide
Query:  EYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        +YGPL+L  LPKGG+PPSGPSKGTN+VN+
Subjt:  EYGPLLLGFLPKGGIPPSGPSKGTNDVNS

TrEMBL top hitse value%identityAlignment
A0A0A0K7U2 Uncharacterized protein1.0e-1473.33Show/hide
Query:  FVFALILSFSVSSSSSARLLRSRSLSAAPEWKLDIPADPAATLSTEYGPLLLGFLPKGG-IPPSGPSKGTNDVNS
        F+F LIL  SV SSSSARLLR +SLS  P  KLDIPADPAA   TEY  LLLGFLPKGG IPPSGPSKGTN+ N+
Subjt:  FVFALILSFSVSSSSSARLLRSRSLSAAPEWKLDIPADPAATLSTEYGPLLLGFLPKGG-IPPSGPSKGTNDVNS

A0A5E4ES54 PREDICTED: glysoja_0383158.0e-0459.52Show/hide
Query:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        +PA P   A  + +YGPL+L  LPKG  PPSGPSKGTND+N+
Subjt:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS

A0A6J5U6R1 Uncharacterized protein3.6e-0461.9Show/hide
Query:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        +PA P   A  + +YGPL+L  LPKG  PPSGPSKGTNDVN+
Subjt:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS

A0A7J0GW62 Uncharacterized protein4.7e-0443.37Show/hide
Query:  LVFVFALILSFSVSSSSSARLLRSRS---LSAAPEWKLDIPADPAAT----LSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        L     L +   +S SSSARLL+  S       P    D P + A      L + YGPL L  LPKG +PPSGPSKGTN++N+
Subjt:  LVFVFALILSFSVSSSSSARLLRSRS---LSAAPEWKLDIPADPAAT----LSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS

M5XE75 Uncharacterized protein8.0e-0459.52Show/hide
Query:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS
        +PA P   A  + +YGPL+L  LPKG  PPSGPSKGTND+N+
Subjt:  IPADP--AATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATCTTAAATTGGTTTTTGTTTTTGCTTTAATTCTTTCCTTCTCTGTTTCTTCTTCTTCTTCCGCCAGATTGCTGCGCAGCCGATCTCTTTCAGCCGCGCCGGA
GTGGAAACTTGACATCCCGGCGGACCCAGCGGCGACGCTGTCGACGGAGTATGGGCCTTTACTTCTGGGATTTTTGCCGAAAGGGGGAATTCCGCCGTCGGGGCCAAGCA
AGGGGACCAACGACGTCAACAGTTAG
mRNA sequenceShow/hide mRNA sequence
TCTCAAATTTCTTTCTTCAATGGCAAATCTTAAATTGGTTTTTGTTTTTGCTTTAATTCTTTCCTTCTCTGTTTCTTCTTCTTCTTCCGCCAGATTGCTGCGCAGCCGAT
CTCTTTCAGCCGCGCCGGAGTGGAAACTTGACATCCCGGCGGACCCAGCGGCGACGCTGTCGACGGAGTATGGGCCTTTACTTCTGGGATTTTTGCCGAAAGGGGGAATT
CCGCCGTCGGGGCCAAGCAAGGGGACCAACGACGTCAACAGTTAGTTTTATCTGTGTGTTTGGGTTTGTGCGATCCTAATTATTTGTTATTATGTAAAGTGTAAATACTC
ATTAAATAGTTGTGGACATTTCATTCATTCTTTTCATTTTCATCCTGCAATTGTTTGTAATATTAATATACGGATAAACTTCCATGTTATTGCTTCCAACTATTTGAATT
TTGAAGTATGTTTCCTTCGTAATCTCAAGTTCGACATGTACTTGTAATATTACTGTTTATTTAATATGAAATAAATTATCACGAG
Protein sequenceShow/hide protein sequence
MANLKLVFVFALILSFSVSSSSSARLLRSRSLSAAPEWKLDIPADPAATLSTEYGPLLLGFLPKGGIPPSGPSKGTNDVNS