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Sed0018011 (gene) of Chayote v1 genome

Gene IDSed0018011
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:542696..542980
RNA-Seq ExpressionSed0018011
SyntenySed0018011
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571501.1 hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2767.37Show/hide
Query:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWS-MVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
        MKIQF FLLAI+ VLAN H L+ CRTMKEDRQ WS ++ QQSL+RVPVPPSA NGG+ IP  +GQ  F GKST +PAH+Y   VP PFGVA+ TN
Subjt:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWS-MVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2869.47Show/hide
Query:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWS-MVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
        MKIQF FLLAI+ VLAN H L+ CRTMKEDRQ WS ++ QQSLQR PVPPSA NGG+ IPVP+GQ +F GKST +PAH+Y   VP PFGVA+ TN
Subjt:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWS-MVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2565.62Show/hide
Query:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWS-MVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGV-ALKTN
        MKIQF FLLAI+ VLAN H L+ CRTMKED Q WS ++ QQSLQR PVPP+A NGG+ IP P+GQ  F GKST +PAH+Y   VP P GV A+KTN
Subjt:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWS-MVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGV-ALKTN
KAG6571505.1 hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3070.21Show/hide
Query:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSMVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
        MKIQF FLLAIV +LAN H L+ CRTMK+DRQ WS++ QQSLQR PVPPSA NGG+ IPVP+GQ  F GKST +PAH+Y   VP PFGVA+KTN
Subjt:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSMVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
KAG6571506.1 hypothetical protein SDJN03_28234, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2564.89Show/hide
Query:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSMVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
        MKIQF F+LAI  VLAN H L+ CR MK D+Q WSMV QQSLQR PVPPS  +GG+ IPVP+G+  FAGK  A PA  YPDH+  P GVAL TN
Subjt:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSMVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
TrEMBL top hitse value%identityAlignment
A0A0A0LCY5 Uncharacterized protein4.4e-2268.29Show/hide
Query:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSM---VFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTY
        MKIQF FLLAI+ +LANTH L+ CRT+K+D+QNWS+   + QQSLQRVPVPPSA NG +NIPVPVGQ  FAGK++AA A  Y
Subjt:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSM---VFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTY
A0A5D3B777 Uncharacterized protein3.3e-2562.77Show/hide
Query:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSMVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
        MKIQF F  AI+ +LAN H L+ CRTMK+D++ WSM+ QQSLQR PVPPS  +G +NIPVP+GQ  FAGKST  PA   PD++  P GVALKTN
Subjt:  MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSMVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAATTTGGTTTCCTTTTAGCCATTGTGTTTGTTCTTGCCAACACCCATTGGCTCGAAGGTTGCCGAACCATGAAAGAGGATCGACAAAACTGGTCCATGGT
GTTTCAGCAGTCGCTCCAGAGGGTGCCCGTTCCTCCCTCTGCGGTAAACGGTGGCTCGAATATTCCGGTACCGGTCGGGCAAATGACCTTTGCTGGAAAATCCACGGCCG
CGCCGGCACACACCTATCCGGATCATGTACCAGGTCCCTTTGGTGTGGCCTTGAAGACAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCCAATTTGGTTTCCTTTTAGCCATTGTGTTTGTTCTTGCCAACACCCATTGGCTCGAAGGTTGCCGAACCATGAAAGAGGATCGACAAAACTGGTCCATGGT
GTTTCAGCAGTCGCTCCAGAGGGTGCCCGTTCCTCCCTCTGCGGTAAACGGTGGCTCGAATATTCCGGTACCGGTCGGGCAAATGACCTTTGCTGGAAAATCCACGGCCG
CGCCGGCACACACCTATCCGGATCATGTACCAGGTCCCTTTGGTGTGGCCTTGAAGACAAACTAA
Protein sequenceShow/hide protein sequence
MKIQFGFLLAIVFVLANTHWLEGCRTMKEDRQNWSMVFQQSLQRVPVPPSAVNGGSNIPVPVGQMTFAGKSTAAPAHTYPDHVPGPFGVALKTN