CuGenDBv2

Gene ID	Sed0018016
Organism	Sechium edule (Chayote v1)
Description	protein SPA, chloroplastic
Genome location	LG13:21076269..21080002
RNA-Seq Expression	Sed0018016
Synteny	Sed0018016
Gene Ontology terms	GO:0010206 - photosystem II repair (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003756 - protein disulfide isomerase activity (molecular function)
InterPro domains	IPR035272 - Protein of unknown function DUF5351 IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136388.1 protein disulfide-isomerase LQY1, chloroplastic [Cucumis sativus]

3.5e-74

87.34

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP  S SLSVT S NQR+  SYP IRA+DLDQNTVVALSVGLVSVA+GIG+PVFYETQIDNAAKRENTQPCFPC+GSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGDD+EVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_008466492.1 PREDICTED: protein SPA, chloroplastic [Cucumis melo]

2.0e-74

87.97

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP SS SLSVT S NQR+  SYP IRA+DLDQNTVVALSVGLVSVAVGIG+PVFYETQIDNAAKRENTQPCFPC+GSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGD++EVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_022142253.1 protein SPA, chloroplastic [Momordica charantia]

3.5e-74

88.39

Show/hide

Query:  TAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQKCR
        TAPS SRLHSPFL+ PLKP S+ASLS+T SRNQR+  SYP IRA+DLDQNTVVALSVGLVSVAVGIG+PVFYETQIDNAAKRENTQPCFPC+GSGAQKCR
Subjt:  TAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQKCR

Query:  FCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        FCMGTGNVTVELGGD++EVSRCINC+G GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  FCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_022936404.1 protein SPA, chloroplastic [Cucurbita moschata]

4.1e-75

87.97

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP SSASLS+T SRNQR+  SYP IRA+DLDQNTVVALSVGL S+AVGIG+PVFYETQIDNAAKRENTQPCFPCTGSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGD++EVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_038899789.1 protein SPA, chloroplastic [Benincasa hispida]

2.4e-75

88.61

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP SS SLSVT SRNQR+  +YP IRA+DLDQNTVVALSVGLVSVAVGIG+PVFYETQIDNAAKRENTQPCFPC+GSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGD++EVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ55 Uncharacterized protein

1.7e-74

87.34

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP  S SLSVT S NQR+  SYP IRA+DLDQNTVVALSVGLVSVA+GIG+PVFYETQIDNAAKRENTQPCFPC+GSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGDD+EVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A1S3CRE4 protein SPA, chloroplastic

9.9e-75

87.97

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP SS SLSVT S NQR+  SYP IRA+DLDQNTVVALSVGLVSVAVGIG+PVFYETQIDNAAKRENTQPCFPC+GSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGD++EVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1CMU6 protein SPA, chloroplastic

1.7e-74

88.39

Show/hide

Query:  TAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQKCR
        TAPS SRLHSPFL+ PLKP S+ASLS+T SRNQR+  SYP IRA+DLDQNTVVALSVGLVSVAVGIG+PVFYETQIDNAAKRENTQPCFPC+GSGAQKCR
Subjt:  TAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQKCR

Query:  FCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        FCMGTGNVTVELGGD++EVSRCINC+G GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  FCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1F877 protein SPA, chloroplastic

2.0e-75

87.97

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP SSASLS+T SRNQR+  SYP IRA+DLDQNTVVALSVGL S+AVGIG+PVFYETQIDNAAKRENTQPCFPCTGSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGD++EVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1IFD3 protein SPA, chloroplastic

2.0e-75

87.97

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        MT+ APS SRLHSPFL+CPLKP SSASLS+T SRNQR+  SYP IRA+DLDQNTVVALSVGL S+AVGIG+PVFYETQIDNAAKRENTQPCFPCTGSGAQ
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        +CRFCMGTGNVTVELGGD++EVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

SwissProt top hits

e value

%identity

Alignment

K4BVL1 Protein SPA, chloroplastic

1.3e-63

74.05

Show/hide

Query:  ITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQ--RAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ
        +TAPS SR  SPF+  PLK  + +S   T   +Q  R   SYP I+A+DLDQNTV+A++VG++SVA+G+G+PVFYETQIDNAAKRENTQPCFPCTG+GAQ
Subjt:  ITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQ--RAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQ

Query:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        KCRFCMGTG+VTVELGG + EVSRCINCDGAG LTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  KCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

Q8GSJ6 Protein disulfide-isomerase LQY1, chloroplastic

7.1e-62

72.33

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRA-ATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGA
        M ++APS  RLHSPF+HCP+    S+      +RN R+ +TSYP I+A +LD NTVVA+SVG+ SVA+GIG+PVFYETQIDNAAKRENTQPCFPC G+GA
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRA-ATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGA

Query:  QKCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        QKCR C+G+GNVTVELGG ++EVS CINCDGAG+LTCTTCQGSG+QPRYLDRREFKDDD
Subjt:  QKCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

Arabidopsis top hits

e value

%identity

Alignment

AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

5.0e-63

72.33

Show/hide

Query:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRA-ATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGA
        M ++APS  RLHSPF+HCP+    S+      +RN R+ +TSYP I+A +LD NTVVA+SVG+ SVA+GIG+PVFYETQIDNAAKRENTQPCFPC G+GA
Subjt:  MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRA-ATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGA

Query:  QKCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD
        QKCR C+G+GNVTVELGG ++EVS CINCDGAG+LTCTTCQGSG+QPRYLDRREFKDDD
Subjt:  QKCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

AT2G38000.1 chaperone protein dnaJ-related

3.1e-04

30.77

Show/hide

Query:  FYETQIDNAAKRENTQPCFPCTGSG--------------------AQKCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGI
        + ETQ+      E  + C  CTG G                      KC  C G G V  + G D    + C NC+G G L C TCQ  G+
Subjt:  FYETQIDNAAKRENTQPCFPCTGSG--------------------AQKCRFCMGTGNVTVELGGDDREVSRCINCDGAGTLTCTTCQGSGI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACAATAACAGCACCTTCGTTTTCTCGCCTTCATTCTCCATTTCTGCATTGTCCTCTCAAACCCAATTCATCAGCTTCTTTATCTGTTACAATTTCAAGAAATCAAAG
AGCAGCAACATCATATCCAAGCATCAGAGCTCTAGATCTTGACCAAAACACGGTTGTGGCACTTTCAGTTGGGCTAGTGAGTGTTGCAGTTGGAATAGGTGTTCCTGTCT
TCTATGAAACCCAAATTGATAATGCTGCGAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCACTGGTTCGGGAGCACAGAAATGCAGATTTTGCATGGGAACTGGAAAT
GTGACCGTGGAACTTGGTGGAGATGATAGGGAAGTCTCCAGATGTATCAACTGTGATGGCGCTGGCACATTGACATGCACTACATGTCAGGGCTCTGGAATTCAACCTCG
ATATCTAGATCGTAGAGAATTTAAAGATGATGATTGA

mRNA sequence

Show/hide mRNA sequence

CAATTTTGGGCTTATATAAACCATGGGCTGTGAGAATCATGATTGGGCTTACAAGCTAAGAAAGAACAGCCCAAAACACCATTCTTTTTCTCTAATAAGGGAGTTGATGA
GTGGTGGGTATCAGCCAAAAAAAAAAAAAAAAATGGATATCCAAATCCAGAGTAAGTGGTGAAGCTTTGCAGTTCCAAAACAAACCTCAACCCCAAATGTTTCTTTAGGA
ATTAGGACTGAAATTGACTTCATTTTTCTATCTGATTCAAAGCTCTAAGAAGCAAAAGCAATTCAGAAATGACAATAACAGCACCTTCGTTTTCTCGCCTTCATTCTCCA
TTTCTGCATTGTCCTCTCAAACCCAATTCATCAGCTTCTTTATCTGTTACAATTTCAAGAAATCAAAGAGCAGCAACATCATATCCAAGCATCAGAGCTCTAGATCTTGA
CCAAAACACGGTTGTGGCACTTTCAGTTGGGCTAGTGAGTGTTGCAGTTGGAATAGGTGTTCCTGTCTTCTATGAAACCCAAATTGATAATGCTGCGAAGCGTGAAAATA
CTCAGCCCTGCTTTCCCTGCACTGGTTCGGGAGCACAGAAATGCAGATTTTGCATGGGAACTGGAAATGTGACCGTGGAACTTGGTGGAGATGATAGGGAAGTCTCCAGA
TGTATCAACTGTGATGGCGCTGGCACATTGACATGCACTACATGTCAGGGCTCTGGAATTCAACCTCGATATCTAGATCGTAGAGAATTTAAAGATGATGATTGATGCTC
ACCAGAAACAGAAGCAGCAACATTCACTGGTTTGCTTTCAATTTGATGCCTTGAAACTTTTAGTTCCATTGGATCGAAGAACTTGGTAATTTCCACCAAGCACCTCCTTT
TGGTAACCTTTTTCCTGCATTCTTCTAATGTATATCTGTGGTTAATAATACAAACAACTTTGTAAGAGAAGAGAGTAATTAACTGCACTATGTCAAGTTTATGACTTCAT
CCCTTTGTTGACCGTCAAAATTCATACTTAAATCTGAGAGTTTTA

Protein sequence

Show/hide protein sequence

MTITAPSFSRLHSPFLHCPLKPNSSASLSVTISRNQRAATSYPSIRALDLDQNTVVALSVGLVSVAVGIGVPVFYETQIDNAAKRENTQPCFPCTGSGAQKCRFCMGTGN
VTVELGGDDREVSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD

Sed0018016 (gene) of Chayote v1 genome