CuGenDBv2

Gene ID	Sed0018064
Organism	Sechium edule (Chayote v1)
Description	DUF1713 domain-containing protein
Genome location	LG08:29132751..29133633
RNA-Seq Expression	Sed0018064
Synteny	Sed0018064
Gene Ontology terms	GO:0006397 - mRNA processing (biological process)
InterPro domains	IPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]

2.4e-44

76.34

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MAS+L+ LIRKSPPTR IAAL ++TS N+S PFILH+P+D  KKPD   C SN++  STSNPS FSQFYPSFPFGL LPQI S GL+PFEPDCV  DDSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

XP_011651574.1 uncharacterized protein LOC101220058 [Cucumis sativus]

2.4e-44

76.34

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MAS+L+ LIRKSPPTR IAAL ++TS N+S PFILH+P+D  KKPD   C SN++  STSNPS FSQFYPSFPFGL LPQI S GL+PFEPDCV  DDSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

XP_022928332.1 uncharacterized protein LOC111435191 [Cucurbita moschata]

3.1e-44

78.63

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MASIL+KLIRKSPPTRTIAAL S+TS N+S P+ILH+P+DI +KPD G CDSNL+ VSTSNPSQFS F+PSFPFGL L QI S G I FEPD V  DDSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

XP_022989528.1 uncharacterized protein LOC111486591 [Cucurbita maxima]

8.9e-44

78.63

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCVD--DSR
        MASIL+KLIRKSPPTRTIAAL S+TS N S P+ILH+P+DI +KPD G CDSNL+ VSTS PSQFSQF+PSFPFGLYL QI S G I FEPD V+  DSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCVD--DSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

XP_023530210.1 uncharacterized protein LOC111792842 [Cucurbita pepo subsp. pepo]

4.0e-44

78.63

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MASIL+KLIRKSPPTRTIAAL S+TS N+S P+ILH+P+DI +KPD G CDSNL+ VSTSNPSQFS F+PSFPFGL L QIPS G I FEPD V  DD R
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDP0 DUF1713 domain-containing protein

1.1e-44

76.34

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MAS+L+ LIRKSPPTR IAAL ++TS N+S PFILH+P+D  KKPD   C SN++  STSNPS FSQFYPSFPFGL LPQI S GL+PFEPDCV  DDSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

A0A5A7UNU9 DUF1713 domain-containing protein

3.1e-42

75.57

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MAS+L+KLIRKSPP+R IAAL ++TS N+S PFILH+P+D  KK D     SNL+  STSNPSQFSQFYPSFPFGL LPQI S GL+PFEPD V  DDSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

A0A6J1EJL0 uncharacterized protein LOC111435191

1.5e-44

78.63

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MASIL+KLIRKSPPTRTIAAL S+TS N+S P+ILH+P+DI +KPD G CDSNL+ VSTSNPSQFS F+PSFPFGL L QI S G I FEPD V  DDSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

A0A6J1F832 uncharacterized protein LOC111441723

1.5e-41

73.28

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR
        MAS+L+KL+RKSPPTR IAAL ++TS N   P+ILH+P+D  KKPD   CDSNL+ VSTSNPS FS FYPSFPFG  LPQI S+G++PFEP+ V  DDSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCV--DDSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

A0A6J1JQJ4 uncharacterized protein LOC111486591

4.3e-44

78.63

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCVD--DSR
        MASIL+KLIRKSPPTRTIAAL S+TS N S P+ILH+P+DI +KPD G CDSNL+ VSTS PSQFSQF+PSFPFGLYL QI S G I FEPD V+  DSR
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCVD--DSR

Query:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT
        K+WADSVKKKRK+KMNKHKYKKLRKRLRRQT
Subjt:  KMWADSVKKKRKKKMNKHKYKKLRKRLRRQT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G63150.1 unknown protein

3.8e-08

34.27

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Query:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPI--------DIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPD
        MA+++ + +R      +I  L   T+P++   F   +P          + +KPD     + L  +S +  +Q  +FYPSF  GL L      GL   E  
Subjt:  MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPI--------DIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPD

Query:  CVDDSRK------MWADSVKKKRKKKMNKHKYKKLRKRLRRQT
         +++  +      ++ADSVKKKRKKKMNKHKY+KLRK+L R++
Subjt:  CVDDSRK------MWADSVKKKRKKKMNKHKYKKLRKRLRRQT

Sequences

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CDS sequence

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ATGGCGTCGATCCTCGAAAAGCTCATCAGAAAATCCCCACCCACAAGAACAATTGCTGCTTTATGCAGCCGGACCTCACCAAATATCTCGGCGCCCTTCATTCTTCACCG
GCCGATCGACATTGGTAAGAAACCAGATGGAGGGCCTTGTGATTCTAATTTATCCATTGTTTCAACTTCGAATCCGTCTCAATTTTCGCAGTTCTACCCTAGTTTTCCAT
TTGGGCTTTACTTGCCGCAAATACCCTCAAATGGGTTGATTCCCTTCGAGCCGGATTGTGTCGATGATTCTCGGAAAATGTGGGCTGATAGTGTGAAGAAGAAGAGGAAA
AAGAAGATGAACAAGCACAAGTACAAGAAGTTAAGGAAGAGACTTCGAAGACAGACGTAG

mRNA sequence

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TTCGTATTCTTTGTCACTGCACATCTGGTTAGGGTTTGTGGCGCTGTCAATCACTCTAAAACATACAGCTTCCCTTCAGTTTCAGTTTCAAAACCTTCGCTCTATTTCAA
TGGCGTCGATCCTCGAAAAGCTCATCAGAAAATCCCCACCCACAAGAACAATTGCTGCTTTATGCAGCCGGACCTCACCAAATATCTCGGCGCCCTTCATTCTTCACCGG
CCGATCGACATTGGTAAGAAACCAGATGGAGGGCCTTGTGATTCTAATTTATCCATTGTTTCAACTTCGAATCCGTCTCAATTTTCGCAGTTCTACCCTAGTTTTCCATT
TGGGCTTTACTTGCCGCAAATACCCTCAAATGGGTTGATTCCCTTCGAGCCGGATTGTGTCGATGATTCTCGGAAAATGTGGGCTGATAGTGTGAAGAAGAAGAGGAAAA
AGAAGATGAACAAGCACAAGTACAAGAAGTTAAGGAAGAGACTTCGAAGACAGACGTAGTTGCTTTATTGGGTAAGACTATATGTATTTTTATAGTCTCGTAGAACGGAT
TTAACGATTTTCGTCATTTTTGTTTAGTGGCAAATTCTTGAGAGATTGTTGTTTCGATCTCAAGGGAAGCTTTTCTCAGAACAGAGTTGTTTATGGATTTCAGTGCTGTT
AGCTTTTGAAGTACAAATGATTCATATTAGTAAAATAGTGATTGATACTTTCTGAATAGGGGGTTTTGTTGCAGATTTTGTTTTCATTTTGCTTTAGTTTTAAGATTGAA
ACAGAAGCAAGATGAAAATTTTCGGGTTTTATAAGGTTAAGTTTTGACCTTGTGGTTCTGAATAATCAAGCTACTTTTGTGCTGGTAATGGAACGGTGGTAGTGTTATTA
ATA

Protein sequence

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MASILEKLIRKSPPTRTIAALCSRTSPNISAPFILHRPIDIGKKPDGGPCDSNLSIVSTSNPSQFSQFYPSFPFGLYLPQIPSNGLIPFEPDCVDDSRKMWADSVKKKRK
KKMNKHKYKKLRKRLRRQT

Sed0018064 (gene) of Chayote v1 genome