; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018066 (gene) of Chayote v1 genome

Gene IDSed0018066
OrganismSechium edule (Chayote v1)
DescriptionPMD domain-containing protein
Genome locationLG06:32633932..32635216
RNA-Seq ExpressionSed0018066
SyntenySed0018066
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]4.8e-5454.82Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  WVL+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L    L + V ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]5.7e-5555.84Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  WVL+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L   RL  AV ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.7e-5455.33Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ QS +DGLSL+ E+  AGT +  W  L N      LS E+     +  WVL+S +     N G  LT G+RLIEG+THW
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L    L  AV ASLYTYD  NDVVRAFCEAWCP TNTL T  GE+SI LWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]8.2e-5454.82Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  W+L+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+  ++ F D YWEWLE VVGRN ++L   RL  AV ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]4.8e-5454.82Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  WVL+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L    L + V ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein2.3e-5454.82Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  WVL+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L    L + V ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

A0A5A7TX42 Uncharacterized protein2.7e-5555.84Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  WVL+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L   RL  AV ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

A0A5A7VHW8 PMD domain-containing protein4.0e-5454.82Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  W+L+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+  ++ F D YWEWLE VVGRN ++L   RL  AV ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

A0A5D3BXQ4 Putative mitochondrial protein1.8e-5455.33Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ QS +DGLSL+ E+  AGT +  W  L N      LS E+     +  WVL+S +     N G  LT G+RLIEG+THW
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L    L  AV ASLYTYD  NDVVRAFCEAWCP TNTL T  GE+SI LWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

A0A5D3D7V4 PMD domain-containing protein2.3e-5454.82Show/hide
Query:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW
        MV+F ER  SG ++LVIL D+ Q  +DGLSL+ E+  AG  +  W  L N    P LS E+     +  WVL+SS+     N G  LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHL-NVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE
         T+ K+ G++ F D YWEWLE VVGRN ++L    L + V ASLYTYD  +DVVRAFCEAWCP TNTL T  GE+SISLWDLW   GL IKG FYEE
Subjt:  NTIMKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50750.1 Plant mobile domain protein family5.2e-0628.87Show/hide
Query:  HWNTIMK--IHGDWSFIDLYWE-WLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG
        H N + K   +  W F +  +E W   +   +E    +  +  AVMAS+Y      D++    E WCP T T     GE +++L D+  + G S+ G
Subjt:  HWNTIMK--IHGDWSFIDLYWE-WLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG

AT1G50770.1 Aminotransferase-like, plant mobile domain family protein1.3e-0429.73Show/hide
Query:  WLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG
        W   +   +E +  +  +  AV AS Y  +   ++V    E WCP T T     GE +I+L D+  + G S+ G
Subjt:  WLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG

AT1G50790.1 Plant mobile domain protein family6.8e-0627.88Show/hide
Query:  WLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEETFVCLCISFMDGLLIISKHIL
        W   +   +E +  +  +  A++AS Y      D+V    E WCP TNT   + GE +I+L D+  + G S+ G      F  L  S  + +  + K  L
Subjt:  WLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEETFVCLCISFMDGLLIISKHIL

Query:  KFQR
        K ++
Subjt:  KFQR

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein8.9e-0630.11Show/hide
Query:  NTIMKIHGDWSFID-LYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG
        +T +K  G W F +  +  W   +   +E +  +  +  AV+AS Y      D+V    E WCP T T     GE +I+L D+  + G S+ G
Subjt:  NTIMKIHGDWSFID-LYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG

AT1G51538.1 Aminotransferase-like, plant mobile domain family protein8.9e-0625.84Show/hide
Query:  MKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG
        +  +G WS    +  W + +   +E +  +  +  A+ AS+Y       ++ A  E WCP T +     GE +I+L D+  + G S++G
Subjt:  MKIHGDWSFIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCATTTTGCCGAGCGCGTAACCTCAGGATCGAAGTATTTAGTGATTTTGAAAGATAAAGAGCAATCAATCAAGGATGGACTTTCTTTGCTTGCTGAGGAGGCTTT
AGCTGGCACTCTTTCCCCTACATGGCAACACCTGAATGTCAAATTTTCACCTGAACTATCAAAAGAGTTAACTTCTGAAGGCGACGAAAGAGTTTGGGTCTTAAAATCCT
CAATGCCTGGTAGAACGTATAATGAGGGCCCTGAGCTAACATTAGGACGTCGCTTGATTGAAGGTGAAACTCATTGGAATACTATAATGAAGATTCACGGTGATTGGTCT
TTCATTGATCTTTATTGGGAGTGGCTAGAATTTGTCGTTGGCCGTAATGAGAAAGTCCTTAATCAAAATCGTTTACGTAATGCGGTGATGGCTTCTCTCTACACCTATGA
TCATTGTAACGATGTGGTTCGTGCCTTTTGTGAAGCCTGGTGCCCTCGAACGAATACCCTCTTTACCGCCCTAGGTGAAATCTCTATCTCGCTATGGGACTTATGGGATA
TTTGTGGTCTTTCTATCAAAGGAAAATTTTATGAGGAGACGTTTGTTTGCCTATGCATTTCATTCATGGATGGCTTGCTTATTATTTCAAAACACATTTTGAAGTTCCAA
AGAAAATTCGAGGTGCTCGAATGGTTGATTTCTCCGACGAAGGTGGTGCTATACATTTTGATGAGTACGAAGCTCGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCATTTTGCCGAGCGCGTAACCTCAGGATCGAAGTATTTAGTGATTTTGAAAGATAAAGAGCAATCAATCAAGGATGGACTTTCTTTGCTTGCTGAGGAGGCTTT
AGCTGGCACTCTTTCCCCTACATGGCAACACCTGAATGTCAAATTTTCACCTGAACTATCAAAAGAGTTAACTTCTGAAGGCGACGAAAGAGTTTGGGTCTTAAAATCCT
CAATGCCTGGTAGAACGTATAATGAGGGCCCTGAGCTAACATTAGGACGTCGCTTGATTGAAGGTGAAACTCATTGGAATACTATAATGAAGATTCACGGTGATTGGTCT
TTCATTGATCTTTATTGGGAGTGGCTAGAATTTGTCGTTGGCCGTAATGAGAAAGTCCTTAATCAAAATCGTTTACGTAATGCGGTGATGGCTTCTCTCTACACCTATGA
TCATTGTAACGATGTGGTTCGTGCCTTTTGTGAAGCCTGGTGCCCTCGAACGAATACCCTCTTTACCGCCCTAGGTGAAATCTCTATCTCGCTATGGGACTTATGGGATA
TTTGTGGTCTTTCTATCAAAGGAAAATTTTATGAGGAGACGTTTGTTTGCCTATGCATTTCATTCATGGATGGCTTGCTTATTATTTCAAAACACATTTTGAAGTTCCAA
AGAAAATTCGAGGTGCTCGAATGGTTGATTTCTCCGACGAAGGTGGTGCTATACATTTTGATGAGTACGAAGCTCGAGAATTGA
Protein sequenceShow/hide protein sequence
MVHFAERVTSGSKYLVILKDKEQSIKDGLSLLAEEALAGTLSPTWQHLNVKFSPELSKELTSEGDERVWVLKSSMPGRTYNEGPELTLGRRLIEGETHWNTIMKIHGDWS
FIDLYWEWLEFVVGRNEKVLNQNRLRNAVMASLYTYDHCNDVVRAFCEAWCPRTNTLFTALGEISISLWDLWDICGLSIKGKFYEETFVCLCISFMDGLLIISKHILKFQ
RKFEVLEWLISPTKVVLYILMSTKLEN