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Sed0018067 (gene) of Chayote v1 genome

Gene IDSed0018067
OrganismSechium edule (Chayote v1)
DescriptionTranscription factor TFIIIB component B''-like isoform X3
Genome locationLG01:25609054..25610153
RNA-Seq ExpressionSed0018067
SyntenySed0018067
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006457 - protein folding (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR011599 - Prefoldin alpha subunit, archaea-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016603.1 putative prefoldin subunit 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2082.86Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK+ KEQ DMEV+LL DSLNNIRTATSRLD A+ A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
XP_022938455.1 probable prefoldin subunit 5 [Cucurbita moschata]1.5e-2082.86Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK+ KEQ DMEV+LL DSLNNIRTATSRLD A+ A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
XP_022958568.1 probable prefoldin subunit 5 [Cucurbita moschata]2.8e-2285.71Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK++KEQ DMEV+LL DSLNNIRTATSRLDNAS A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
XP_023513364.1 probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]8.1e-2284.29Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGS GEGVRSLELEKMS+EQLK++KEQ DMEV+LL DSLNNIRTATSRLDNAS A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
XP_023549859.1 probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]1.2e-2082.86Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK+ KEQ DMEV+LL DSLNNIRTATSRLD A+ A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
TrEMBL top hitse value%identityAlignment
A0A0A0KMS5 Uncharacterized protein5.9e-1877.33Show/hide
Query:  MASKKGGSA-GEGVRS--LELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQGCR
        MAS+KGGS+ GEGVRS  LELEKMS+EQL++ KEQ DMEV+LL DSLNNIRTATSRLD AS A HDLSL PQG R
Subjt:  MASKKGGSA-GEGVRS--LELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQGCR
A0A6J1FD74 probable prefoldin subunit 57.4e-2182.86Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK+ KEQ DMEV+LL DSLNNIRTATSRLD A+ A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
A0A6J1H3F5 probable prefoldin subunit 51.4e-2285.71Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK++KEQ DMEV+LL DSLNNIRTATSRLDNAS A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
A0A6J1JP08 probable prefoldin subunit 51.4e-2285.71Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK++KEQ DMEV+LL DSLNNIRTATSRLDNAS A HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
A0A6J1JVI6 probable prefoldin subunit 51.7e-2081.43Show/hide
Query:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        MAS+KGGSAGEGVRSLELEKMS+EQLK+ KEQ DMEV+LL DSLNNIRTATSRLD A+   HDLSL PQG
Subjt:  MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
SwissProt top hitse value%identityAlignment
P57742 Probable prefoldin subunit 52.9e-1475.93Show/hide
Query:  ELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        E+EKM I+QLK+LKEQAD+EV+LLQDSLNNIRTAT RLD A+ A +DLSL PQG
Subjt:  ELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
Arabidopsis top hitse value%identityAlignment
AT5G23290.1 prefoldin 52.1e-1575.93Show/hide
Query:  ELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG
        E+EKM I+QLK+LKEQAD+EV+LLQDSLNNIRTAT RLD A+ A +DLSL PQG
Subjt:  ELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAAAAAAGGTGGCAGCGCCGGTGAAGGAGTACGGTCGTTGGAGTTAGAGAAGATGAGCATCGAGCAACTCAAAAGCCTCAAGGAACAGGCTGATATGGAAGT
CGATCTTCTTCAAGACAGCCTTAACAACATTCGCACCGCCACTTCTCGCCTCGACAATGCCTCCACAGCTTTTCACGACCTCTCGCTCTGTCCTCAAGGCTGCAGATTTA
CTGGCATTATAGGGTACAATATAAATCGTTTATTCGTTTCATCTGAAATCGTTCTGGCTGGTTTATTAACATTAAATGATGCTATCATGCTAATTGTTGTCATCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGAAAAAAGGTGGCAGCGCCGGTGAAGGAGTACGGTCGTTGGAGTTAGAGAAGATGAGCATCGAGCAACTCAAAAGCCTCAAGGAACAGGCTGATATGGAAGT
CGATCTTCTTCAAGACAGCCTTAACAACATTCGCACCGCCACTTCTCGCCTCGACAATGCCTCCACAGCTTTTCACGACCTCTCGCTCTGTCCTCAAGGCTGCAGATTTA
CTGGCATTATAGGGTACAATATAAATCGTTTATTCGTTTCATCTGAAATCGTTCTGGCTGGTTTATTAACATTAAATGATGCTATCATGCTAATTGTTGTCATCAATTAG
Protein sequenceShow/hide protein sequence
MASKKGGSAGEGVRSLELEKMSIEQLKSLKEQADMEVDLLQDSLNNIRTATSRLDNASTAFHDLSLCPQGCRFTGIIGYNINRLFVSSEIVLAGLLTLNDAIMLIVVIN