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Sed0018070 (gene) of Chayote v1 genome

Gene IDSed0018070
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:21870862..21871314
RNA-Seq ExpressionSed0018070
SyntenySed0018070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025575.1 hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa]3.2e-3760Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAIVVV
        MG CINT  FP LQKIK F+CC  E  +L + I N+A  AY   K  SQAFTTSSAV EV H  PP+PVRI         D  I+KP D  KL KA +VV
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAIVVV

Query:  SKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY
        SK+QLEL+LR SK FGSKGIAV+FSD FK D+  PRW PALPTIPE   Y
Subjt:  SKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY

KAE8647639.1 hypothetical protein Csa_004428 [Cucumis sativus]1.0e-3863.09Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENI-ACKAYEGLKLTSQAFTTSSAV--LEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAI
        MG CINT  FP LQKIK F+CC  ED NLA+ IENI ACK        +QAFTTSSAV   EV H  PP+PVRI         D  I+KP DLCKL K  
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENI-ACKAYEGLKLTSQAFTTSSAV--LEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAI

Query:  VVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPE
        +VVSK+QLEL+LR SK FGSKGIAV+FSDSFK D+  PRW PALPTIPE
Subjt:  VVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPE

KAF9851460.1 hypothetical protein H0E87_015599 [Populus deltoides]1.0e-1135.62Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAF-------TTSSAVLEVGHKAPPI--PVRIDDDNDDDDDDDDIIKPVDL
        MG CI+   +   ++ K  +   GE +   +  ++ I    Y G  L   A         T     EV H  P +  P R++  +         +   + 
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAF-------TTSSAVLEVGHKAPPI--PVRIDDDNDDDDDDDDIIKPVDL

Query:  CKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY
        C  RK  +VV+++QLELLLRNSK F SKGIAVRFS+SFK  E   +WRP+L TIPE  K+
Subjt:  CKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY

KAG6594706.1 hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2359.2Show/hide
Query:  NLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKA--PPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFS
        +LAV +E IA     GLKLT       SAVLEVG  A  PP  V I       DDDDDI KP  LCKL KA +VVSKEQLE LL NS+ FGS+GIAV+FS
Subjt:  NLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKA--PPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFS

Query:  DSFKFDEHIPRWRPALPTIPEAHKY
        DSFKFD    RW P LPTI E H Y
Subjt:  DSFKFDEHIPRWRPALPTIPEAHKY

KAG6603830.1 hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3558.28Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRK-AIVV
        MG CINT  F  LQK+KD +CC GED +LA+ IE IA          S A+TTSSAVLEV   APP+PV I       DDDD + KP  LCKL K   +V
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRK-AIVV

Query:  VSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY
        VSK+QLEL+LRNS+ F SKGIAV+FSDSF+ D+  PRW PALPTI E H Y
Subjt:  VSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY

TrEMBL top hitse value%identityAlignment
A0A0A0KHP3 Uncharacterized protein7.5e-4062.09Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENI-ACKAYEGLKLTSQAFTTSSAV--LEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAI
        MG CINT  FP LQKIK F+CC  ED NLA+ IENI ACK        +QAFTTSSAV   EV H  PP+PVRI         D  I+KP DLCKL K  
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENI-ACKAYEGLKLTSQAFTTSSAV--LEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAI

Query:  VVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY
        +VVSK+QLEL+LR SK FGSKGIAV+FSDSFK D+  PRW PALPTIPE   Y
Subjt:  VVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY

A0A5D3CLY8 Uncharacterized protein1.6e-3760Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAIVVV
        MG CINT  FP LQKIK F+CC  E  +L + I N+A  AY   K  SQAFTTSSAV EV H  PP+PVRI         D  I+KP D  KL KA +VV
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAIVVV

Query:  SKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY
        SK+QLEL+LR SK FGSKGIAV+FSD FK D+  PRW PALPTIPE   Y
Subjt:  SKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY

A0A5N5M953 Uncharacterized protein7.6e-0833.97Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAFTTS----SAVLEVG---HKAPPI--PVRIDDDNDDDDDDDDIIKPVDL
        MG CI+       ++ K  +   GE +   +  ++ I    Y G  L ++A   +      VLE G   H  PP+  P R++  +         +   + 
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAFTTS----SAVLEVG---HKAPPI--PVRIDDDNDDDDDDDDIIKPVDL

Query:  CKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPE
        C  RK  +VV+++QLELLLRNSK    +GIAV+FS+SFK  E   +W+P+L TIPE
Subjt:  CKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPE

A0A6A1W907 Uncharacterized protein3.4e-0830.12Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAFTTSSAV---------------LEVGHKAPPIPVRIDDDNDDDDDDDDI
        MG C +    P  +KI+  +   GE + +    +E I C  Y G KL   +   S  +               L+     PPIP R  +           
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAFTTSSAV---------------LEVGHKAPPIPVRIDDDNDDDDDDDDI

Query:  IKPVDLCKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY
            +  K +K  +VV+K QLELLLR++  F SK IA+    SF+  E   +WRP+L  IPE H +
Subjt:  IKPVDLCKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY

B9HD50 Uncharacterized protein9.6e-1135Show/hide
Query:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAF----TTSSAVLEVG---HKAPPI--PVRIDDDNDDDDDDDDIIKPVDL
        MG CI+   +   ++ K  +   GE +   +  ++ I    Y G  L   A           LE G   +  P +  P R++  +         +   + 
Subjt:  MGKCINTTQFPQLQKIKDFMCCNGE-DTNLAVSIENIACKAYEGLKLTSQAF----TTSSAVLEVG---HKAPPI--PVRIDDDNDDDDDDDDIIKPVDL

Query:  CKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY
        C  RK  +VV+++QLELLLRNSK F SKGIAVRFS+SFK  E   +WRP+L TIPE  K+
Subjt:  CKLRKAIVVVSKEQLELLLRNSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAATGCATAAACACAACCCAATTTCCACAGCTGCAAAAGATCAAAGATTTCATGTGTTGCAATGGAGAAGACACCAATTTGGCAGTGTCAATTGAAAATATAGC
TTGTAAGGCTTATGAAGGCCTAAAGCTAACAAGCCAAGCCTTTACAACTTCAAGTGCTGTGCTAGAAGTTGGGCATAAGGCTCCTCCGATTCCTGTTCGTATTGATGATG
ATAATGATGATGACGATGACGATGACGATATTATCAAGCCTGTAGATTTGTGCAAGCTTCGAAAGGCCATTGTTGTTGTCAGCAAAGAACAGCTTGAGTTGCTCTTGAGA
AACTCCAAAATGTTTGGCTCTAAAGGCATTGCGGTTCGATTCTCCGATAGTTTCAAGTTCGACGAACATATCCCCAGATGGCGCCCCGCCTTGCCCACCATTCCAGAGGC
TCACAAGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAATGCATAAACACAACCCAATTTCCACAGCTGCAAAAGATCAAAGATTTCATGTGTTGCAATGGAGAAGACACCAATTTGGCAGTGTCAATTGAAAATATAGC
TTGTAAGGCTTATGAAGGCCTAAAGCTAACAAGCCAAGCCTTTACAACTTCAAGTGCTGTGCTAGAAGTTGGGCATAAGGCTCCTCCGATTCCTGTTCGTATTGATGATG
ATAATGATGATGACGATGACGATGACGATATTATCAAGCCTGTAGATTTGTGCAAGCTTCGAAAGGCCATTGTTGTTGTCAGCAAAGAACAGCTTGAGTTGCTCTTGAGA
AACTCCAAAATGTTTGGCTCTAAAGGCATTGCGGTTCGATTCTCCGATAGTTTCAAGTTCGACGAACATATCCCCAGATGGCGCCCCGCCTTGCCCACCATTCCAGAGGC
TCACAAGTACTAG
Protein sequenceShow/hide protein sequence
MGKCINTTQFPQLQKIKDFMCCNGEDTNLAVSIENIACKAYEGLKLTSQAFTTSSAVLEVGHKAPPIPVRIDDDNDDDDDDDDIIKPVDLCKLRKAIVVVSKEQLELLLR
NSKMFGSKGIAVRFSDSFKFDEHIPRWRPALPTIPEAHKY