; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018085 (gene) of Chayote v1 genome

Gene IDSed0018085
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationLG03:3745688..3747648
RNA-Seq ExpressionSed0018085
SyntenySed0018085
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133553.1 cyclin-dependent protein kinase inhibitor SMR1 [Momordica charantia]2.8e-5084.73Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGG-----NGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEI
        MSMDLEFPKNLP+IRLPLQVRS PK S+S NIPS   DRDGG      GGEVD RGCRTPTSAEHKIPK+ SCPGAP+KPKRPPVPCKRKLTMELKFFEI
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGG-----NGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEI

Query:  VNQEEVDNFFRSAYDLEASPMAPTKRSCCRS
        VNQEEVDNFFRSAYDLEAS  APTKRSCCRS
Subjt:  VNQEEVDNFFRSAYDLEASPMAPTKRSCCRS

XP_022923009.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]8.9e-5283.33Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFP+NLP+IRLPLQVRSPPK S+S NIPSS +D D   G ++D RGCRTPTSAEHKIPK+ SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASPMAPTKRSCCRS
        VDNFFRSAYDLEAS  AP+KRSCCRS
Subjt:  VDNFFRSAYDLEASPMAPTKRSCCRS

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]1.5e-5183.33Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFP+NLP+IRLPLQVRSPPK S+S NIPSS +D D   G ++D RGCRTPTSAEHKIPK+ SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASPMAPTKRSCCRS
        VDNFFRSAYDLEAS  AP KRSCCRS
Subjt:  VDNFFRSAYDLEASPMAPTKRSCCRS

XP_023521119.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]1.5e-5183.33Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFP+NLP+IRLPLQVRSPPK S+S NIPSS +D D   G ++D RGCRTPTSAEHKIPK+ SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASPMAPTKRSCCRS
        VDNFFRSAYDLEAS  AP KRSCCRS
Subjt:  VDNFFRSAYDLEASPMAPTKRSCCRS

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]1.5e-5183.33Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLP+IRLPLQVRSPPK S S NIPSSA+DRD     ++D+R CRTPTSAEHKIPK+ SCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASPMAPTKRSCCRS
        VDNFFRSAYDLEAS  AP KR+CCRS
Subjt:  VDNFFRSAYDLEASPMAPTKRSCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ6 Uncharacterized protein5.8e-4981.75Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGN-IPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFPKNLP+IRLPLQVRSPPK S S N IPSS  D D      +D+R CRTPTSAEHKIPK+ SCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGN-IPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASPMAPTKRSCCR
        EVDNFFRSAYDLE+SP AP KRSCCR
Subjt:  EVDNFFRSAYDLEASPMAPTKRSCCR

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like1.1e-4780.16Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGN-IPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFPKNLP+IRLPLQVRSPPK S S N IPSS  D D      +D+R CRTPTSAEHKIPK+ SCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGN-IPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLEASPMAPTKRSCCR
        EVDNFFRSAYDLE+S  AP KR+CCR
Subjt:  EVDNFFRSAYDLEASPMAPTKRSCCR

A0A6J1BZG0 cyclin-dependent protein kinase inhibitor SMR11.4e-5084.73Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGG-----NGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEI
        MSMDLEFPKNLP+IRLPLQVRS PK S+S NIPS   DRDGG      GGEVD RGCRTPTSAEHKIPK+ SCPGAP+KPKRPPVPCKRKLTMELKFFEI
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGG-----NGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEI

Query:  VNQEEVDNFFRSAYDLEASPMAPTKRSCCRS
        VNQEEVDNFFRSAYDLEAS  APTKRSCCRS
Subjt:  VNQEEVDNFFRSAYDLEASPMAPTKRSCCRS

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like4.3e-5283.33Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFP+NLP+IRLPLQVRSPPK S+S NIPSS +D D   G ++D RGCRTPTSAEHKIPK+ SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASPMAPTKRSCCRS
        VDNFFRSAYDLEAS  AP+KRSCCRS
Subjt:  VDNFFRSAYDLEASPMAPTKRSCCRS

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like7.3e-5283.33Show/hide
Query:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFP+NLP+IRLPLQVRSPPK S+S NIPSS +D D   G ++D RGCRTPTSAEHKIPK+ SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEE
Subjt:  MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLEASPMAPTKRSCCRS
        VDNFFRSAYDLEAS  AP KRSCCRS
Subjt:  VDNFFRSAYDLEASPMAPTKRSCCRS

SwissProt top hitse value%identityAlignment
Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR11.1e-0941.48Show/hide
Query:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVF-SCPGAPRKPKRPPV-----------PCKRKL---T
        MDLE  ++L +   P    +P KI S     +S   +D G+  E D R C TPTS EHKIP V  S P  PRKP+ PP             CKRKL   T
Subjt:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVF-SCPGAPRKPKRPPV-----------PCKRKL---T

Query:  MELKFFEIVNQEEVDNFFRSAYDLEASPMAPTKRS
         E+    I+N+EE+D FF S Y+ E S  A  +RS
Subjt:  MELKFFEIVNQEEVDNFFRSAYDLEASPMAPTKRS

Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR39.3e-0446.55Show/hide
Query:  DQRGCRTPTSAEHKIPKV--FSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        ++ GC+TPTS++HKIP+V    CP APRKPK       KRKLT       +VN+  +D
Subjt:  DQRGCRTPTSAEHKIPKV--FSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM1.3e-0837.29Show/hide
Query:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSC--PGAPRKPKRPPVP-------CKRKLTMELKFF
        MDL+  ++LP +  P  +    KI ++ N      D DGG        GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +
Subjt:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSC--PGAPRKPKRPPVP-------CKRKLTMELKFF

Query:  E-IVNQEEVDNFFRSAYD
        E IVN++E++ FF S Y+
Subjt:  E-IVNQEEVDNFFRSAYD

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR21.4e-0445.45Show/hide
Query:  TPTSAEHKIPKVFSCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP+V +CP  PRK P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKVFSCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein1.0e-0545.45Show/hide
Query:  TPTSAEHKIPKVFSCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP+V +CP  PRK P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKVFSCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS8.1e-1141.48Show/hide
Query:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVF-SCPGAPRKPKRPPV-----------PCKRKL---T
        MDLE  ++L +   P    +P KI S     +S   +D G+  E D R C TPTS EHKIP V  S P  PRKP+ PP             CKRKL   T
Subjt:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVF-SCPGAPRKPKRPPV-----------PCKRKL---T

Query:  MELKFFEIVNQEEVDNFFRSAYDLEASPMAPTKRS
         E+    I+N+EE+D FF S Y+ E S  A  +RS
Subjt:  MELKFFEIVNQEEVDNFFRSAYDLEASPMAPTKRS

AT5G02420.1 unknown protein6.6e-0546.55Show/hide
Query:  DQRGCRTPTSAEHKIPKV--FSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        ++ GC+TPTS++HKIP+V    CP APRKPK       KRKLT       +VN+  +D
Subjt:  DQRGCRTPTSAEHKIPKV--FSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

AT5G04470.1 cyclin-dependent protein kinase inhibitors8.9e-1037.29Show/hide
Query:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSC--PGAPRKPKRPPVP-------CKRKLTMELKFF
        MDL+  ++LP +  P  +    KI ++ N      D DGG        GC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +
Subjt:  MDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSC--PGAPRKPKRPPVP-------CKRKLTMELKFF

Query:  E-IVNQEEVDNFFRSAYD
        E IVN++E++ FF S Y+
Subjt:  E-IVNQEEVDNFFRSAYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATGGACCTTGAATTCCCTAAAAATCTCCCCCAAATCCGCCTCCCCTTACAAGTCCGATCGCCGCCGAAGATCTCCAGTTCCGGCAACATACCTTCCTCCGCCGC
CGATCGCGACGGCGGCAACGGCGGCGAAGTGGACCAGCGCGGCTGCCGGACGCCGACCTCCGCCGAGCACAAGATTCCGAAGGTCTTCAGCTGTCCTGGAGCGCCGAGGA
AGCCGAAGCGTCCGCCGGTTCCTTGCAAGAGGAAATTGACGATGGAGCTCAAGTTCTTCGAGATCGTCAACCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGAT
CTCGAAGCTTCTCCCATGGCGCCGACGAAGCGAAGCTGCTGCCGGTCTGAAACCTGA
mRNA sequenceShow/hide mRNA sequence
GAAGAGCTGTGAGAGAGAGATGAAAGTTAAAAAGAAGCCATAACCATTCACCAAGCTGTCTATTGTCTTAAAAGGCACGTCTTTCAAGTGATTCTCTAAATAAATAGTGT
GTTCATCCACTTTCCTTTCCCCTTTATTTTTATTTTTCAATCACAAATCCTTTCTCTCTTTCGACGAATCTTTCAATCTTTCCGCCATGTCTATGGACCTTGAATTCCCT
AAAAATCTCCCCCAAATCCGCCTCCCCTTACAAGTCCGATCGCCGCCGAAGATCTCCAGTTCCGGCAACATACCTTCCTCCGCCGCCGATCGCGACGGCGGCAACGGCGG
CGAAGTGGACCAGCGCGGCTGCCGGACGCCGACCTCCGCCGAGCACAAGATTCCGAAGGTCTTCAGCTGTCCTGGAGCGCCGAGGAAGCCGAAGCGTCCGCCGGTTCCTT
GCAAGAGGAAATTGACGATGGAGCTCAAGTTCTTCGAGATCGTCAACCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTTCTCCCATGGCGCCG
ACGAAGCGAAGCTGCTGCCGGTCTGAAACCTGATCGTCCTGAATTTGCCGGTTTGTGCCCTAATTTACTACACCGATTATAGAAAATCAATTTTTCTTTAATTCTTTCCT
TTTTCTTCCATAGCGAGTCTCAGCTCTTGATGTTGTGTATTATCATTACACGTACATACACATGAAATCGAATCGAATCGATTGCAATTCCTCTTTGCATCATCGTAATC
AGAGATCGATAATCGAATTCGGATTATCAACCGAGTGAAAATTTTCCAGAAACGAACTCACAATCAAAATTATGCACAGATTTCCTTTTCTCCTTACAAAATCCTCACCG
ATTTCCTGAAACTCGTTGCGTTCTTCGATCGTTTCCATCACTTTCACGGATTTTTTTTCTTCTCAATCCTTGATCTGAGTTTTCGAATCGAACTCGTGGATGTTGGAAAC
CCTAACTATTTCGTACGGCTGTCGTTTGAATGAATTCGATCTGTGGATGCTATAATCAAGCTGTAGAAATCATGAATTCGATGCTTATTAGTGAAATTACGCGATCGTGT
TGATGATTTCTTCAATTCTGCTTTGCGATTATGATAGAGTTTGATTTTGATCTTGATCTGCAGATTTGTGCCCTGTTTTTTTTTGTTCTTGTTTAGTAATTGACAATGAT
TTTAGGAATTTTGATTTTTACATATTTTGTTTTGATCAATTTCCATATTAGAGAGACAGAGAAATTTATTGGAATTCTCCAATTTCATTTTCAAATTTTAGAGAGAGGGG
CAAAAATTTTGATTCTATCCCCAATTTCAAATTAGAGAGAGAAAATAATTGGGGGGAGTTGAAATTTCTAGAGAGAGAGAGAAAAAAAGAGAGAGGGAGAGGCCAAAATT
TTGAATTTTTATTAAAAAAATATTATAATAATTTTATTTTTCAGATAAGCATTTTCTTGTCCCATTGTAGGCCACAACTTTAAGTTTTTTTTTTTTTTTTGAGAAAGGCC
ACAACTTTAAGTTTACCCAGGCAAAAAGGGGTAAATTTATTGTCTCCAAATTATTTAATTTGAGTGCTTTTTTATTAAGAAAATAATGGTTTCTGAGGAAATATGGACTG
TTTTTTTTTTTTTCATAAATTAATAAAAGAAAATTTACGCTGTATAACAACTTTTTTACCACAGTTTACAATTATAGCACATTTTTAAAAATAATTCTTTTATAGCAAAT
TCTGTTATTTTAAAAAAAAAATTATTTACCTTTTTTATAGAAGGCTTTGATAGAATCTATCATTCTCTAGTAATGGAAGTTTATCAATTTTATTAGTGATTGATTCTATC
AGCTCTTATTGATAGATTGTTTAATATAATCTGATGGAAGTCTATCAATTTACTTTATTTATTAGTAATTGATTCTATCACCCTTTATCGA
Protein sequenceShow/hide protein sequence
MSMDLEFPKNLPQIRLPLQVRSPPKISSSGNIPSSAADRDGGNGGEVDQRGCRTPTSAEHKIPKVFSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYD
LEASPMAPTKRSCCRSET