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Sed0018115 (gene) of Chayote v1 genome

Gene IDSed0018115
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:19968866..19975435
RNA-Seq ExpressionSed0018115
SyntenySed0018115
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65814.1 hypothetical protein Csa_023311 [Cucumis sativus]6.3e-1155.7Show/hide
Query:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKR
        MGLR   LCLLL+F+V+ V   P++G+GD  MK    IM  +R L VKINDY+DPS N+GHN  PFKS PKKP K +++
Subjt:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKR

XP_004294294.1 PREDICTED: protein PSY3-like [Fragaria vesca subsp. vesca]9.7e-0441.86Show/hide
Query:  GLRTCFLCLLLLFLVVK------VWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG
        G+R C L LLL F +V       +  FPV+   +D M MT     +RRSL+  +NDY+DP+AN+GH+P        KP K   RKG
Subjt:  GLRTCFLCLLLLFLVVK------VWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG

XP_022964739.1 uncharacterized protein LOC111464728 [Cucurbita moschata]1.1e-1256.79Show/hide
Query:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG
        MGLR   LC LLLF+V+ VW  PV+G+ D+ MKM+  IM  ++SLI+ INDY+DP+AN+ H+  PFKS PK P K  KRKG
Subjt:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG

XP_022970490.1 uncharacterized protein LOC111469456 [Cucurbita maxima]3.7e-1155.56Show/hide
Query:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG
        MGLR   L  LLLF+V+  W  PV+G+ D+ MKM+  IM  +RSLI+ INDY+DP+AN+ H+  PFKS PK P K  KRKG
Subjt:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG

TrEMBL top hitse value%identityAlignment
A0A0A0LXM5 Uncharacterized protein3.0e-1155.7Show/hide
Query:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKR
        MGLR   LCLLL+F+V+ V   P++G+GD  MK    IM  +R L VKINDY+DPS N+GHN  PFKS PKKP K +++
Subjt:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKR

A0A6J1HP46 uncharacterized protein LOC1114647285.5e-1356.79Show/hide
Query:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG
        MGLR   LC LLLF+V+ VW  PV+G+ D+ MKM+  IM  ++SLI+ INDY+DP+AN+ H+  PFKS PK P K  KRKG
Subjt:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG

A0A6J1I305 uncharacterized protein LOC1114694561.8e-1155.56Show/hide
Query:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG
        MGLR   L  LLLF+V+  W  PV+G+ D+ MKM+  IM  +RSLI+ INDY+DP+AN+ H+  PFKS PK P K  KRKG
Subjt:  MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGAGGACATGTTTTTTGTGTTTGTTGCTGCTGTTCTTGGTCGTAAAAGTATGGAGTTTTCCAGTTGCAGGAGAAGGTGATGATGGAATGAAGATGACAACAAT
AATAATGGCAAAAAGAAGGTCTTTGATTGTGAAAATAAATGATTATGAGGATCCAAGTGCAAATAAGGGACACAATCCACAACCATTCAAGTCTAATCCAAAAAAACCAC
ACAAGGATCATAAGAGAAAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGAGGACATGTTTTTTGTGTTTGTTGCTGCTGTTCTTGGTCGTAAAAGTATGGAGTTTTCCAGTTGCAGGAGAAGGTGATGATGGAATGAAGATGACAACAAT
AATAATGGCAAAAAGAAGGTCTTTGATTGTGAAAATAAATGATTATGAGGATCCAAGTGCAAATAAGGGACACAATCCACAACCATTCAAGTCTAATCCAAAAAAACCAC
ACAAGGATCATAAGAGAAAAGGCTAA
Protein sequenceShow/hide protein sequence
MGLRTCFLCLLLLFLVVKVWSFPVAGEGDDGMKMTTIIMAKRRSLIVKINDYEDPSANKGHNPQPFKSNPKKPHKDHKRKG